Click here to switch to the map view.

The map label for this gene is yxkD [H]

Identifier: 229916876

GI number: 229916876

Start: 1117920

End: 1118759

Strand: Reverse

Name: yxkD [H]

Synonym: EAT1b_1149

Alternate gene names: 229916876

Gene position: 1118759-1117920 (Counterclockwise)

Preceding gene: 229916877

Following gene: 229916875

Centisome position: 37.29

GC content: 48.21

Gene sequence:

>840_bases
ATGCGAAAAAGAATAAGTGATATCGCGGTGATTCTCGCTGCCATCATCGTCATCGGGTTGGCCATCAATCTATTTTTAGG
TCCTCACGACATCGCCGCAGGCGGTGTGACCGGGATTGGGATTCTGTTAGAGGAAGTCCTTGATATCGATCGTTCGATTG
TCGTCTCGGTTCTAAACGGACTCTTGCTCATCCTGACATTCGTCTTTCTTGGGAAGAAAGTGTTTTATAACACTTTACTC
GGTAGTCTGTTTTTACCGATTGCGCTCGCGGTCATTCCGAAGTATATGGTCACGTCAGATCGCTTCTTCTCGGTCGTCTT
CGGTAGCATCTTGTTCGCCGTTGCCGTCGCGATGCTCTATCGAATCGGGGCTTCGAGTGGGGGGACCACGATTCCGCCGT
TAATCTTGCACAAATATACGGGATTGAATACGGCAATCGGATTCTTTTTGACGGACGCCCTCATCGTCGTATCGAGTGTG
TTCGTATTTGGGGTCGAGTCGTTCCTTTTCGCCATCTCCTCGATTATTTTGACATCGGCCGTCATGGCGTATATCGAACT
CGGGCTCGATCGGAAGAAAGCAATCTTTATTATGAGTGAGTCTCATCTCGATGACATCAAACAAGCGCTCTATCGAGAAG
TCGACCGAGGCATTACCGTGTTTGATGTCAGAGGAGGATTTCAAGGGAAAGATCGAGAGATGTTGATGATCGTGTTGACG
CGGAGCGAGTATCAGACAGCACTCAAAGCCGTCAATGCCATCGACAAACAGTCGTTCATGATTGTCTACAATGTCGCAGA
CGTACACGGTCTAGGATTTAGTTATCAACCACGTGTTTGA

Upstream 100 bases:

>100_bases
TGAATCGATTCCAATCAAAGAATTAGAAGATAGTGTCTCTTTTGTCTTACGGGTCATTGAAACGATGCAGACGTTCCGCT
CGTGAGAGGAAGGGATTGTG

Downstream 100 bases:

>100_bases
ATCCAGAAAGGGGATTTCGCGCATGAACTCCTTACTCGCCTTTACGATTGTTATGCTGATTTGGACGATTAGTGATTACG
TCGCCAAAAAAACGAAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MRKRISDIAVILAAIIVIGLAINLFLGPHDIAAGGVTGIGILLEEVLDIDRSIVVSVLNGLLLILTFVFLGKKVFYNTLL
GSLFLPIALAVIPKYMVTSDRFFSVVFGSILFAVAVAMLYRIGASSGGTTIPPLILHKYTGLNTAIGFFLTDALIVVSSV
FVFGVESFLFAISSIILTSAVMAYIELGLDRKKAIFIMSESHLDDIKQALYREVDRGITVFDVRGGFQGKDREMLMIVLT
RSEYQTALKAVNAIDKQSFMIVYNVADVHGLGFSYQPRV

Sequences:

>Translated_279_residues
MRKRISDIAVILAAIIVIGLAINLFLGPHDIAAGGVTGIGILLEEVLDIDRSIVVSVLNGLLLILTFVFLGKKVFYNTLL
GSLFLPIALAVIPKYMVTSDRFFSVVFGSILFAVAVAMLYRIGASSGGTTIPPLILHKYTGLNTAIGFFLTDALIVVSSV
FVFGVESFLFAISSIILTSAVMAYIELGLDRKKAIFIMSESHLDDIKQALYREVDRGITVFDVRGGFQGKDREMLMIVLT
RSEYQTALKAVNAIDKQSFMIVYNVADVHGLGFSYQPRV
>Mature_279_residues
MRKRISDIAVILAAIIVIGLAINLFLGPHDIAAGGVTGIGILLEEVLDIDRSIVVSVLNGLLLILTFVFLGKKVFYNTLL
GSLFLPIALAVIPKYMVTSDRFFSVVFGSILFAVAVAMLYRIGASSGGTTIPPLILHKYTGLNTAIGFFLTDALIVVSSV
FVFGVESFLFAISSIILTSAVMAYIELGLDRKKAIFIMSESHLDDIKQALYREVDRGITVFDVRGGFQGKDREMLMIVLT
RSEYQTALKAVNAIDKQSFMIVYNVADVHGLGFSYQPRV

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 30424; Mature: 30424

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRISDIAVILAAIIVIGLAINLFLGPHDIAAGGVTGIGILLEEVLDIDRSIVVSVLNG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLLILTFVFLGKKVFYNTLLGSLFLPIALAVIPKYMVTSDRFFSVVFGSILFAVAVAMLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIGASSGGTTIPPLILHKYTGLNTAIGFFLTDALIVVSSVFVFGVESFLFAISSIILTSA
HHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAYIELGLDRKKAIFIMSESHLDDIKQALYREVDRGITVFDVRGGFQGKDREMLMIVLT
HHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEE
RSEYQTALKAVNAIDKQSFMIVYNVADVHGLGFSYQPRV
CHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCC
>Mature Secondary Structure
MRKRISDIAVILAAIIVIGLAINLFLGPHDIAAGGVTGIGILLEEVLDIDRSIVVSVLNG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLLILTFVFLGKKVFYNTLLGSLFLPIALAVIPKYMVTSDRFFSVVFGSILFAVAVAMLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIGASSGGTTIPPLILHKYTGLNTAIGFFLTDALIVVSSVFVFGVESFLFAISSIILTSA
HHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAYIELGLDRKKAIFIMSESHLDDIKQALYREVDRGITVFDVRGGFQGKDREMLMIVLT
HHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEE
RSEYQTALKAVNAIDKQSFMIVYNVADVHGLGFSYQPRV
CHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]