| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916821
Identifier: 229916821
GI number: 229916821
Start: 1061629
End: 1062438
Strand: Reverse
Name: 229916821
Synonym: EAT1b_1094
Alternate gene names: NA
Gene position: 1062438-1061629 (Counterclockwise)
Preceding gene: 229916822
Following gene: 229916820
Centisome position: 35.42
GC content: 43.21
Gene sequence:
>810_bases ATGATGTCAGAACTAAAACGTATTCTCGTAACGGCTACGATGAGTTCAGGGAAATCGACGCTCGTCAACGCTTTTATCGG ACAGCAAATCATGATGGCTCAAAACGAGTCTTGCACGTCGTTACCTTGGGTCATTACGGAAGATCCTGAATCGTCGAAAC CGTATGGACGCCATAATCGGATGCGCATCACGTTTAAACAAAATATAGCTGCCGTCCTCCATGAGTTAACAAACGAGACT GTGCCCATTTTCACACCCATGTATCGTACAGAAGCCGATGTGATTTGGCAGCTCATTGATACACCTGGCGTCAATTCTTC CACAGACATGGAACATAAGCGTTTGGCAGAATCGTACGTACGGGAGATGGATTATGACGTCCTGCTCTATGTAGTAAATG GTGGACATCTTGGAACACAAGACGATGAAATGCATCTTTGCTTTATTCAACAAGTTGTCCCTTCTCAAAAAATCATTTTT GTGATGAACAAGGTCGATCAGTTTCGAAAGGGACATGATTCAATTCAAGACAGTGTGGTCACGCTGAAGAACCGTTTGCA TGAATTTGGTTTCATTGATCCGATTGTTCAACCCGTCTCAGCGAGGGCGGGCTATCTATTCAAGCGTGAACTACAGCAGT CTGAGCTTTCTGAAGAAGAAATCGATGAACTTGAGTGGTACAAACGGAAGTTTGCCAGAGAGGGATTCGACTTATCCGAA AATAAAGCATCCATGTCTTCCACATTGTTAGACCAGTGTGGGTTACATGCATTAGAAAAATTAATTAAACGGAAGGAAGT TTGTAAATGA
Upstream 100 bases:
>100_bases AGGAAACATTATACAATGAAGTTAAGTTTTTTCTAAAATAAGGATAAGGTAATAAATGGTGTTAAAATAGGGATGGGATT TTAATGAAAGAAGGAACGAT
Downstream 100 bases:
>100_bases GCAAAGTAAAAGTGAGTTATAACCCGTTTAAACTGGAAACGTCAGTGTGGATTGAAGGAGAACTCGTTCGTGAAAATAGC GTGTTGAACGTTGGTTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MMSELKRILVTATMSSGKSTLVNAFIGQQIMMAQNESCTSLPWVITEDPESSKPYGRHNRMRITFKQNIAAVLHELTNET VPIFTPMYRTEADVIWQLIDTPGVNSSTDMEHKRLAESYVREMDYDVLLYVVNGGHLGTQDDEMHLCFIQQVVPSQKIIF VMNKVDQFRKGHDSIQDSVVTLKNRLHEFGFIDPIVQPVSARAGYLFKRELQQSELSEEEIDELEWYKRKFAREGFDLSE NKASMSSTLLDQCGLHALEKLIKRKEVCK
Sequences:
>Translated_269_residues MMSELKRILVTATMSSGKSTLVNAFIGQQIMMAQNESCTSLPWVITEDPESSKPYGRHNRMRITFKQNIAAVLHELTNET VPIFTPMYRTEADVIWQLIDTPGVNSSTDMEHKRLAESYVREMDYDVLLYVVNGGHLGTQDDEMHLCFIQQVVPSQKIIF VMNKVDQFRKGHDSIQDSVVTLKNRLHEFGFIDPIVQPVSARAGYLFKRELQQSELSEEEIDELEWYKRKFAREGFDLSE NKASMSSTLLDQCGLHALEKLIKRKEVCK >Mature_269_residues MMSELKRILVTATMSSGKSTLVNAFIGQQIMMAQNESCTSLPWVITEDPESSKPYGRHNRMRITFKQNIAAVLHELTNET VPIFTPMYRTEADVIWQLIDTPGVNSSTDMEHKRLAESYVREMDYDVLLYVVNGGHLGTQDDEMHLCFIQQVVPSQKIIF VMNKVDQFRKGHDSIQDSVVTLKNRLHEFGFIDPIVQPVSARAGYLFKRELQQSELSEEEIDELEWYKRKFAREGFDLSE NKASMSSTLLDQCGLHALEKLIKRKEVCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30926; Mature: 30926
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSELKRILVTATMSSGKSTLVNAFIGQQIMMAQNESCTSLPWVITEDPESSKPYGRHNR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCC MRITFKQNIAAVLHELTNETVPIFTPMYRTEADVIWQLIDTPGVNSSTDMEHKRLAESYV EEEEHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH REMDYDVLLYVVNGGHLGTQDDEMHLCFIQQVVPSQKIIFVMNKVDQFRKGHDSIQDSVV HHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH TLKNRLHEFGFIDPIVQPVSARAGYLFKRELQQSELSEEEIDELEWYKRKFAREGFDLSE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC NKASMSSTLLDQCGLHALEKLIKRKEVCK CHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMSELKRILVTATMSSGKSTLVNAFIGQQIMMAQNESCTSLPWVITEDPESSKPYGRHNR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCC MRITFKQNIAAVLHELTNETVPIFTPMYRTEADVIWQLIDTPGVNSSTDMEHKRLAESYV EEEEHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH REMDYDVLLYVVNGGHLGTQDDEMHLCFIQQVVPSQKIIFVMNKVDQFRKGHDSIQDSVV HHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH TLKNRLHEFGFIDPIVQPVSARAGYLFKRELQQSELSEEEIDELEWYKRKFAREGFDLSE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC NKASMSSTLLDQCGLHALEKLIKRKEVCK CHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA