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The map label for this gene is yjdA [C]

Identifier: 229916820

GI number: 229916820

Start: 1059314

End: 1061632

Strand: Reverse

Name: yjdA [C]

Synonym: EAT1b_1093

Alternate gene names: 229916820

Gene position: 1061632-1059314 (Counterclockwise)

Preceding gene: 229916821

Following gene: 229916819

Centisome position: 35.39

GC content: 40.19

Gene sequence:

>2319_bases
ATGAGCAAAGTAAAAGTGAGTTATAACCCGTTTAAACTGGAAACGTCAGTGTGGATTGAAGGAGAACTCGTTCGTGAAAA
TAGCGTGTTGAACGTTGGTTCGAAACGTCTTCAAGAGTGGGTCGAACACTTACCGAATTATTTGTACGAGGAATGTAATG
AGAACGAATTTGATCTAGATTTTGTGGGAACAAAAATGGATCTCGAGGACGTAGAAGAGGTTGTCGAAAAGGCGAAAGCA
GAAGGAATCACCATTCATTTGACGCACATTCCAGTTCGTGAGTTGGATCATATGGAACAACGAATTGAAGAGATTTTTCA
AGAACTGATTGAAGGGCCGATTGACGAATTAAAAACTGAAGATTTGAAAGCTTCTTTCCAACAAGCTTTGAATGACGAGT
TCGAAATCACGGTCGTCGCAACGATGAGTGCCGGAAAATCAACGCTTATCAATGCCTTGTTGCAAGAAAAAATTATGCCT
TCGAGCCAAGAGGCTTGTACCGCAACCATCTCACGAATCAAGGATACAGACGCTGCAACATTCACAGCAATCCCTTATCC
GACGTATGGAGAACCATTCGAAGCAATCGAGGGAGTCACACTCGAACAGATGAACGAGCTCAACAATGATGAGAATATCT
CGATGATTGAACTTCATGGTGATATCCCGTTCACAGATACGAAAGAAACGTCGCTTGTTTTGATTGATACACCGGGACCG
AATAACTCTCGAGACGAGAATCACTTGAAGATGACCTACAAAAATCTTTCAGAGTCATCAAAAACACTCGTTCTTTACAT
TCTAAACGCAACACAGCTCGGGGTTAATGACGATTCGAAATTACTTGATGCTGTGGCAGAGAGTATGAAAGTCGGAGGAA
AGCAATCTAAAGATCGTTATCTATTCGTTGTCAATAAGCTCGATCAATTCCGAAAAGGAGAAGACAACGTCGAGATGTCG
CTTGCGAAAGTGAGAAAGTACTTGGCAAACCGTGGTATCGAGGATCCACATCTCTTCCCGGCAACAGCATTGCCAGCACT
CGATATCCGTCAAATCTTGAAAAATCCTGATGAAGTGGATGAAGAGTTAGAAGATGAAATCGGTCCGATCATTCGGAAGC
TAAACCGAAATGAAGAACTTCATCTTGAAAAATATGCTGCATTGACACCAAGCGTGCGTCGAAAAATTGAGGCGGAACTA
GAAGCGATTCCGGATAAGAGCATCTATAACATGGAGAGTGCACTCATCCATACAGGGATCCCAGGAATTGAACATATGAT
CAAGCTCTACGTCGATAAATATGCGCGAACGGCGAAAGTGAAGAATGTCGTCGATACATTCCAACAAAAGTTAGATAGTT
CCCTCGCTTTTGAAAAGATGAAAGAGGCGATTTCGCAGCAGACCGATAAACACGCTAAAATTCAATTGCAAATTGAAGCG
TTGACAGAAAAAATTCAGTATGGAACTGAATCAAAAGAATTCAAAGCCAAGATTGAAGCGATTGATCCAGTGGGAGCAAT
TCGGGATGCAGGTAAAAAGCTTTTAAGTGAGCAGGGCGAACAAATCGCAAATCATCTTGCAGGTAAGCAATCTACGAAAT
TGGAGATGGAAGAAGCAGAAGAATTTGCTGAAGAACTATTAAAAATGGCACAAGAGAATTTCACGAATTTGCATGTCCGG
ATTGAACAAATTATCGAGAAACAATTAAACCGTGCAGCATACGATTTATTAAATGGTTATCGCGAAAAAGTCACGAAGCT
AATGGATGGAATGGAAATAACAGGACTTGATTTTCAACCCTATGAACTGATTCAAGGAGAGCTTGAATTTAATCAACATT
CCATTCAACAAGTTGTCATAAAAGAATCTGTAAAAGTCGGGGAAGAAATGTATAAAAATCCTGAGCGAGAAGGTTTGCTT
GGCTTTTTCAAATTTTATGAACCGAAATTATTGGTAAGAGACGTATACGAAGAGAGACAATTCATTGATGGTCAATCATT
AACTGACCTAATACTCATGGACGTGAAGATTAGTACGCGAAAATCAATCAACCTGATCTGCGATGAAGCCGCACAAACGA
CGCATCAAATCAAATCAGCGTACAACCAAAAGTTTGATGAAGTCGATCGCGTGCTTGTGAATAAACTTCAAGAATTGAAT
CAGTTTACTGAAAATGCAAGCAATATAGAATCATTGCTTGAACAGTCACGCCAAAATTTGATGTGGCTCGAAACAATGGA
AACAAAAATTAATTCAATTATTGAACTAGAACCAGTTCACATCGAGGAGGAACAATCCATTGATTACACAACCATTTAA

Upstream 100 bases:

>100_bases
TCGACTTATCCGAAAATAAAGCATCCATGTCTTCCACATTGTTAGACCAGTGTGGGTTACATGCATTAGAAAAATTAATT
AAACGGAAGGAAGTTTGTAA

Downstream 100 bases:

>100_bases
GCAAGCAGTCACTCAAAAGGATTTGGAGCGAGTCAAAATCATGTTAAGCTCTAGCTTGATTCTTGATTTAACGTTTAAAT
CTTTCCAAGAAATGTTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 772; Mature: 771

Protein sequence:

>772_residues
MSKVKVSYNPFKLETSVWIEGELVRENSVLNVGSKRLQEWVEHLPNYLYEECNENEFDLDFVGTKMDLEDVEEVVEKAKA
EGITIHLTHIPVRELDHMEQRIEEIFQELIEGPIDELKTEDLKASFQQALNDEFEITVVATMSAGKSTLINALLQEKIMP
SSQEACTATISRIKDTDAATFTAIPYPTYGEPFEAIEGVTLEQMNELNNDENISMIELHGDIPFTDTKETSLVLIDTPGP
NNSRDENHLKMTYKNLSESSKTLVLYILNATQLGVNDDSKLLDAVAESMKVGGKQSKDRYLFVVNKLDQFRKGEDNVEMS
LAKVRKYLANRGIEDPHLFPATALPALDIRQILKNPDEVDEELEDEIGPIIRKLNRNEELHLEKYAALTPSVRRKIEAEL
EAIPDKSIYNMESALIHTGIPGIEHMIKLYVDKYARTAKVKNVVDTFQQKLDSSLAFEKMKEAISQQTDKHAKIQLQIEA
LTEKIQYGTESKEFKAKIEAIDPVGAIRDAGKKLLSEQGEQIANHLAGKQSTKLEMEEAEEFAEELLKMAQENFTNLHVR
IEQIIEKQLNRAAYDLLNGYREKVTKLMDGMEITGLDFQPYELIQGELEFNQHSIQQVVIKESVKVGEEMYKNPEREGLL
GFFKFYEPKLLVRDVYEERQFIDGQSLTDLILMDVKISTRKSINLICDEAAQTTHQIKSAYNQKFDEVDRVLVNKLQELN
QFTENASNIESLLEQSRQNLMWLETMETKINSIIELEPVHIEEEQSIDYTTI

Sequences:

>Translated_772_residues
MSKVKVSYNPFKLETSVWIEGELVRENSVLNVGSKRLQEWVEHLPNYLYEECNENEFDLDFVGTKMDLEDVEEVVEKAKA
EGITIHLTHIPVRELDHMEQRIEEIFQELIEGPIDELKTEDLKASFQQALNDEFEITVVATMSAGKSTLINALLQEKIMP
SSQEACTATISRIKDTDAATFTAIPYPTYGEPFEAIEGVTLEQMNELNNDENISMIELHGDIPFTDTKETSLVLIDTPGP
NNSRDENHLKMTYKNLSESSKTLVLYILNATQLGVNDDSKLLDAVAESMKVGGKQSKDRYLFVVNKLDQFRKGEDNVEMS
LAKVRKYLANRGIEDPHLFPATALPALDIRQILKNPDEVDEELEDEIGPIIRKLNRNEELHLEKYAALTPSVRRKIEAEL
EAIPDKSIYNMESALIHTGIPGIEHMIKLYVDKYARTAKVKNVVDTFQQKLDSSLAFEKMKEAISQQTDKHAKIQLQIEA
LTEKIQYGTESKEFKAKIEAIDPVGAIRDAGKKLLSEQGEQIANHLAGKQSTKLEMEEAEEFAEELLKMAQENFTNLHVR
IEQIIEKQLNRAAYDLLNGYREKVTKLMDGMEITGLDFQPYELIQGELEFNQHSIQQVVIKESVKVGEEMYKNPEREGLL
GFFKFYEPKLLVRDVYEERQFIDGQSLTDLILMDVKISTRKSINLICDEAAQTTHQIKSAYNQKFDEVDRVLVNKLQELN
QFTENASNIESLLEQSRQNLMWLETMETKINSIIELEPVHIEEEQSIDYTTI
>Mature_771_residues
SKVKVSYNPFKLETSVWIEGELVRENSVLNVGSKRLQEWVEHLPNYLYEECNENEFDLDFVGTKMDLEDVEEVVEKAKAE
GITIHLTHIPVRELDHMEQRIEEIFQELIEGPIDELKTEDLKASFQQALNDEFEITVVATMSAGKSTLINALLQEKIMPS
SQEACTATISRIKDTDAATFTAIPYPTYGEPFEAIEGVTLEQMNELNNDENISMIELHGDIPFTDTKETSLVLIDTPGPN
NSRDENHLKMTYKNLSESSKTLVLYILNATQLGVNDDSKLLDAVAESMKVGGKQSKDRYLFVVNKLDQFRKGEDNVEMSL
AKVRKYLANRGIEDPHLFPATALPALDIRQILKNPDEVDEELEDEIGPIIRKLNRNEELHLEKYAALTPSVRRKIEAELE
AIPDKSIYNMESALIHTGIPGIEHMIKLYVDKYARTAKVKNVVDTFQQKLDSSLAFEKMKEAISQQTDKHAKIQLQIEAL
TEKIQYGTESKEFKAKIEAIDPVGAIRDAGKKLLSEQGEQIANHLAGKQSTKLEMEEAEEFAEELLKMAQENFTNLHVRI
EQIIEKQLNRAAYDLLNGYREKVTKLMDGMEITGLDFQPYELIQGELEFNQHSIQQVVIKESVKVGEEMYKNPEREGLLG
FFKFYEPKLLVRDVYEERQFIDGQSLTDLILMDVKISTRKSINLICDEAAQTTHQIKSAYNQKFDEVDRVLVNKLQELNQ
FTENASNIESLLEQSRQNLMWLETMETKINSIIELEPVHIEEEQSIDYTTI

Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]

COG id: COG0699

COG function: function code R; Predicted GTPases (dynamin-related)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88310; Mature: 88179

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVKVSYNPFKLETSVWIEGELVRENSVLNVGSKRLQEWVEHLPNYLYEECNENEFDLD
CCCEEECCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
FVGTKMDLEDVEEVVEKAKAEGITIHLTHIPVRELDHMEQRIEEIFQELIEGPIDELKTE
EECCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
DLKASFQQALNDEFEITVVATMSAGKSTLINALLQEKIMPSSQEACTATISRIKDTDAAT
HHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCE
FTAIPYPTYGEPFEAIEGVTLEQMNELNNDENISMIELHGDIPFTDTKETSLVLIDTPGP
EEECCCCCCCCCHHHHCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCC
NNSRDENHLKMTYKNLSESSKTLVLYILNATQLGVNDDSKLLDAVAESMKVGGKQSKDRY
CCCCCCHHHHHHHHHHCCCCCEEEEEEEECEEECCCCHHHHHHHHHHHHHCCCCCCCCCE
LFVVNKLDQFRKGEDNVEMSLAKVRKYLANRGIEDPHLFPATALPALDIRQILKNPDEVD
EEEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHCCCCHHH
EELEDEIGPIIRKLNRNEELHLEKYAALTPSVRRKIEAELEAIPDKSIYNMESALIHTGI
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PGIEHMIKLYVDKYARTAKVKNVVDTFQQKLDSSLAFEKMKEAISQQTDKHAKIQLQIEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHH
LTEKIQYGTESKEFKAKIEAIDPVGAIRDAGKKLLSEQGEQIANHLAGKQSTKLEMEEAE
HHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
EFAEELLKMAQENFTNLHVRIEQIIEKQLNRAAYDLLNGYREKVTKLMDGMEITGLDFQP
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCH
YELIQGELEFNQHSIQQVVIKESVKVGEEMYKNPEREGLLGFFKFYEPKLLVRDVYEERQ
HHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
FIDGQSLTDLILMDVKISTRKSINLICDEAAQTTHQIKSAYNQKFDEVDRVLVNKLQELN
HCCCCCHHHHHHEECEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFTENASNIESLLEQSRQNLMWLETMETKINSIIELEPVHIEEEQSIDYTTI
HHHCCHHHHHHHHHHHHHCEEHHHHHHHHHHHHEEECCCEECCCCCCCCCCC
>Mature Secondary Structure 
SKVKVSYNPFKLETSVWIEGELVRENSVLNVGSKRLQEWVEHLPNYLYEECNENEFDLD
CCEEECCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
FVGTKMDLEDVEEVVEKAKAEGITIHLTHIPVRELDHMEQRIEEIFQELIEGPIDELKTE
EECCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
DLKASFQQALNDEFEITVVATMSAGKSTLINALLQEKIMPSSQEACTATISRIKDTDAAT
HHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCE
FTAIPYPTYGEPFEAIEGVTLEQMNELNNDENISMIELHGDIPFTDTKETSLVLIDTPGP
EEECCCCCCCCCHHHHCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCC
NNSRDENHLKMTYKNLSESSKTLVLYILNATQLGVNDDSKLLDAVAESMKVGGKQSKDRY
CCCCCCHHHHHHHHHHCCCCCEEEEEEEECEEECCCCHHHHHHHHHHHHHCCCCCCCCCE
LFVVNKLDQFRKGEDNVEMSLAKVRKYLANRGIEDPHLFPATALPALDIRQILKNPDEVD
EEEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHCCCCHHH
EELEDEIGPIIRKLNRNEELHLEKYAALTPSVRRKIEAELEAIPDKSIYNMESALIHTGI
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PGIEHMIKLYVDKYARTAKVKNVVDTFQQKLDSSLAFEKMKEAISQQTDKHAKIQLQIEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHH
LTEKIQYGTESKEFKAKIEAIDPVGAIRDAGKKLLSEQGEQIANHLAGKQSTKLEMEEAE
HHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
EFAEELLKMAQENFTNLHVRIEQIIEKQLNRAAYDLLNGYREKVTKLMDGMEITGLDFQP
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCH
YELIQGELEFNQHSIQQVVIKESVKVGEEMYKNPEREGLLGFFKFYEPKLLVRDVYEERQ
HHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
FIDGQSLTDLILMDVKISTRKSINLICDEAAQTTHQIKSAYNQKFDEVDRVLVNKLQELN
HCCCCCHHHHHHEECEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFTENASNIESLLEQSRQNLMWLETMETKINSIIELEPVHIEEEQSIDYTTI
HHHCCHHHHHHHHHHHHHCEEHHHHHHHHHHHHEEECCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA