| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229916817
Identifier: 229916817
GI number: 229916817
Start: 1055024
End: 1055560
Strand: Reverse
Name: 229916817
Synonym: EAT1b_1090
Alternate gene names: NA
Gene position: 1055560-1055024 (Counterclockwise)
Preceding gene: 229916818
Following gene: 229916816
Centisome position: 35.19
GC content: 40.22
Gene sequence:
>537_bases ATGATTGAGTCATTTAAAGTGATTGAACAATTGGTGGAAAAAGTATCTTCGTTAGATGATAAGTTGAAAAAGATTGATCG ACTCGACCAACCAATGGATGTGACAGATGTGGGAGATGGCGAGAAATCATATCGAACGCTTGATGAAAGTTTAGAAAACG CTTCGGATGCAGAGCGCAAAATATATGAGGATGCGAATTTAGAGTCAAAAGAAGTGAATGACAGGGAGTGTTTGATTCGC ACAGATATTAATCCAGATGAGGTAGATGGTCGGGGAAGAACTAATTTAGAAAAAATGTTGGAAGGTAAAGCTCCTACCGT AAACGGGGAACCGATTGATTTGCACCATATTGGACAAAAAAACGATGGACCTCTTGCAGAGTTGACAAGATATGGTGAAC ATCAAGGGAATTCGTCTATCCTGCACGAAAAAAGAACAGAATCAGAAATTGATCGTAACGAATTCGGAAAAGAACGCGCT GCTCACTGGAAAGCTCGAGCAGAAATAATTATTGCGGAAAGAGAGGGAGTAGCATGA
Upstream 100 bases:
>100_bases CTACAATCCAAAGTTTGTTACGTCATCACCTGACGATGGATGTCAGTCGAATTGACGTATATGAAATGTGGGTGGAAGGT GTACGAAAAGGAGTGATTCG
Downstream 100 bases:
>100_bases ACTATTTAGAAGAAATAAAGAACAGTCATGCCGAGACGTTTGATGGTGTGAGTGAAAAAGAGGTTCAACAAGCAGAAGAA AAGTTAGGGATGATGTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MIESFKVIEQLVEKVSSLDDKLKKIDRLDQPMDVTDVGDGEKSYRTLDESLENASDAERKIYEDANLESKEVNDRECLIR TDINPDEVDGRGRTNLEKMLEGKAPTVNGEPIDLHHIGQKNDGPLAELTRYGEHQGNSSILHEKRTESEIDRNEFGKERA AHWKARAEIIIAEREGVA
Sequences:
>Translated_178_residues MIESFKVIEQLVEKVSSLDDKLKKIDRLDQPMDVTDVGDGEKSYRTLDESLENASDAERKIYEDANLESKEVNDRECLIR TDINPDEVDGRGRTNLEKMLEGKAPTVNGEPIDLHHIGQKNDGPLAELTRYGEHQGNSSILHEKRTESEIDRNEFGKERA AHWKARAEIIIAEREGVA >Mature_178_residues MIESFKVIEQLVEKVSSLDDKLKKIDRLDQPMDVTDVGDGEKSYRTLDESLENASDAERKIYEDANLESKEVNDRECLIR TDINPDEVDGRGRTNLEKMLEGKAPTVNGEPIDLHHIGQKNDGPLAELTRYGEHQGNSSILHEKRTESEIDRNEFGKERA AHWKARAEIIIAEREGVA
Specific function: Unknown
COG id: COG5444
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20198; Mature: 20198
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIESFKVIEQLVEKVSSLDDKLKKIDRLDQPMDVTDVGDGEKSYRTLDESLENASDAERK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHH IYEDANLESKEVNDRECLIRTDINPDEVDGRGRTNLEKMLEGKAPTVNGEPIDLHHIGQK HHHCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHCCCCC NDGPLAELTRYGEHQGNSSILHEKRTESEIDRNEFGKERAAHWKARAEIIIAEREGVA CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC >Mature Secondary Structure MIESFKVIEQLVEKVSSLDDKLKKIDRLDQPMDVTDVGDGEKSYRTLDESLENASDAERK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHH IYEDANLESKEVNDRECLIRTDINPDEVDGRGRTNLEKMLEGKAPTVNGEPIDLHHIGQK HHHCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHCCCCC NDGPLAELTRYGEHQGNSSILHEKRTESEIDRNEFGKERAAHWKARAEIIIAEREGVA CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA