| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916815
Identifier: 229916815
GI number: 229916815
Start: 1053567
End: 1054211
Strand: Reverse
Name: 229916815
Synonym: EAT1b_1088
Alternate gene names: NA
Gene position: 1054211-1053567 (Counterclockwise)
Preceding gene: 229916816
Following gene: 229916814
Centisome position: 35.14
GC content: 44.19
Gene sequence:
>645_bases ATGATTCATATGGAGTCGAAAAGACGTGGCTTTCAAGTAATGGCGAGTGTCATGTTTCTGTCTACACTGCTCGTCGGATG TGGCGAAGAAAAAGTGGAAGAAAACGATCCGAAGCAACAGTTTGAAAAAGTGATGGCAGATCTAGAGAAGAAACAACAAG AGAATGAGGAAAAAACGAAGAACCAACCTATCGAACTGACGAAGGATGCCTTCACCACGTACATCGGAGAAATCGATGGC TCAGATTTTATGAAAACCATAGACTTAAAAGATGGTGTGGCAAATATCGAATATTACGCTTCATTTGATGAGTATTTGGA GGAGCACCCGAATACATCATTCAACCCGACCGATTATGCAGTGGCGATTTCTCGTCGAAATGAAATCTTAGTGGGTGAAA CGGTCGGGGTCCTTCGCTACTTCCCAGAAATGAAATCGATTCGGATTTACTTACCTTCTTATAATGAAAATTATACGGTT GACGTCAACCGGCAACAACTCGATGAGCTCTTGGGGTTAGATGTCACAGAGCCTCGTGGCGATTCTCAGTGGCGAGAAGA GTTTACGTCGCCATATGTCTACGATGCGCAAGGACGGGAGCGTTTCTTCGAGACGTTCGTCACAGTCGACAGAACTTCTA CATAA
Upstream 100 bases:
>100_bases ACTGTTAGATCAAGATGAATCTCAGACACTTTGAGACTGTGCCGAACGTTCAAATGAGGCGAATGAGCGAATGAACAATT TAAGGAAAAGAGGAAATGCA
Downstream 100 bases:
>100_bases GCGAGGATAAACGAGAGGAGAGAATCTCATGCGAAAGATATTTGGTGTTGGCGTACTTGCAGTTGTACTGTTATTAATCA TCACAGGGAATATGATGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MIHMESKRRGFQVMASVMFLSTLLVGCGEEKVEENDPKQQFEKVMADLEKKQQENEEKTKNQPIELTKDAFTTYIGEIDG SDFMKTIDLKDGVANIEYYASFDEYLEEHPNTSFNPTDYAVAISRRNEILVGETVGVLRYFPEMKSIRIYLPSYNENYTV DVNRQQLDELLGLDVTEPRGDSQWREEFTSPYVYDAQGRERFFETFVTVDRTST
Sequences:
>Translated_214_residues MIHMESKRRGFQVMASVMFLSTLLVGCGEEKVEENDPKQQFEKVMADLEKKQQENEEKTKNQPIELTKDAFTTYIGEIDG SDFMKTIDLKDGVANIEYYASFDEYLEEHPNTSFNPTDYAVAISRRNEILVGETVGVLRYFPEMKSIRIYLPSYNENYTV DVNRQQLDELLGLDVTEPRGDSQWREEFTSPYVYDAQGRERFFETFVTVDRTST >Mature_214_residues MIHMESKRRGFQVMASVMFLSTLLVGCGEEKVEENDPKQQFEKVMADLEKKQQENEEKTKNQPIELTKDAFTTYIGEIDG SDFMKTIDLKDGVANIEYYASFDEYLEEHPNTSFNPTDYAVAISRRNEILVGETVGVLRYFPEMKSIRIYLPSYNENYTV DVNRQQLDELLGLDVTEPRGDSQWREEFTSPYVYDAQGRERFFETFVTVDRTST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24917; Mature: 24917
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHMESKRRGFQVMASVMFLSTLLVGCGEEKVEENDPKQQFEKVMADLEKKQQENEEKTK CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC NQPIELTKDAFTTYIGEIDGSDFMKTIDLKDGVANIEYYASFDEYLEEHPNTSFNPTDYA CCCCEEHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEE VAISRRNEILVGETVGVLRYFPEMKSIRIYLPSYNENYTVDVNRQQLDELLGLDVTEPRG EEEECCCEEEECHHHHHHHHCCCCCEEEEECCCCCCCEEEECCHHHHHHHHCCCCCCCCC DSQWREEFTSPYVYDAQGRERFFETFVTVDRTST CHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIHMESKRRGFQVMASVMFLSTLLVGCGEEKVEENDPKQQFEKVMADLEKKQQENEEKTK CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC NQPIELTKDAFTTYIGEIDGSDFMKTIDLKDGVANIEYYASFDEYLEEHPNTSFNPTDYA CCCCEEHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEE VAISRRNEILVGETVGVLRYFPEMKSIRIYLPSYNENYTVDVNRQQLDELLGLDVTEPRG EEEECCCEEEECHHHHHHHHCCCCCEEEEECCCCCCCEEEECCHHHHHHHHCCCCCCCCC DSQWREEFTSPYVYDAQGRERFFETFVTVDRTST CHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA