| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916787
Identifier: 229916787
GI number: 229916787
Start: 1011578
End: 1012054
Strand: Reverse
Name: 229916787
Synonym: EAT1b_1060
Alternate gene names: NA
Gene position: 1012054-1011578 (Counterclockwise)
Preceding gene: 229916788
Following gene: 229916786
Centisome position: 33.74
GC content: 45.49
Gene sequence:
>477_bases ATGTCAACGAAGCGAATTCGTCCGGCGATTTATCATTACTATCCGCGCGGACCGCATAAAAACCATATGTCGATGCGCGA AGAAGAATACAAGACAGAAGTCACATTTTTACCACAAGCGTTAACGGACTCGATTTACGTCCAATTGTTTGATTTGAAGT TTGAGATTCCACCGTCAAAAATCTTTTTGGCAGACGCCAAGATGGATGAAGGGGACGAGATGGAAATGAAGACTGCCGTT TATGTCGAAGGCGATCGCACCGTTCGATTTGAACTGTATGTCATGCAGTACTCAGATGAGGAGCGTCTTTCGAACAAACG TTTCTCGCTCACGTTGAATCCGGGGATGAATCCGATTGAAGAAGTCGTGAAACAGATGGAAGGCGCCAAGTATTTCAAGA TGTCGTACAAATACATCGTCGAGACGCTTGACCCGATCACAGTACGATTCGATGACCTCTATGTAACGTTCCGCTGA
Upstream 100 bases:
>100_bases TGCCATCCTTGCCAACTAAATGAAAGCGAATAGAGTTGTTTTGTGCCTGGCACAGCAACTCTTTTCTGTATCATCATCCT AACGATTCGGAGGTGCTTGT
Downstream 100 bases:
>100_bases ACGGAGCAAGTCTTAAGGGAGAAAGGGACCATTTGGTATGTTATTTAGTTCCACGGTATTTCTATTTTATTTCTTGCCGG TCGTGCTGTTGCTGTACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSTKRIRPAIYHYYPRGPHKNHMSMREEEYKTEVTFLPQALTDSIYVQLFDLKFEIPPSKIFLADAKMDEGDEMEMKTAV YVEGDRTVRFELYVMQYSDEERLSNKRFSLTLNPGMNPIEEVVKQMEGAKYFKMSYKYIVETLDPITVRFDDLYVTFR
Sequences:
>Translated_158_residues MSTKRIRPAIYHYYPRGPHKNHMSMREEEYKTEVTFLPQALTDSIYVQLFDLKFEIPPSKIFLADAKMDEGDEMEMKTAV YVEGDRTVRFELYVMQYSDEERLSNKRFSLTLNPGMNPIEEVVKQMEGAKYFKMSYKYIVETLDPITVRFDDLYVTFR >Mature_157_residues STKRIRPAIYHYYPRGPHKNHMSMREEEYKTEVTFLPQALTDSIYVQLFDLKFEIPPSKIFLADAKMDEGDEMEMKTAVY VEGDRTVRFELYVMQYSDEERLSNKRFSLTLNPGMNPIEEVVKQMEGAKYFKMSYKYIVETLDPITVRFDDLYVTFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18844; Mature: 18713
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKRIRPAIYHYYPRGPHKNHMSMREEEYKTEVTFLPQALTDSIYVQLFDLKFEIPPSK CCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHEEEECHHHCCEEEEEEEEEEEECCCCE IFLADAKMDEGDEMEMKTAVYVEGDRTVRFELYVMQYSDEERLSNKRFSLTLNPGMNPIE EEEEECCCCCCCCEEEEEEEEEECCCEEEEEEEEEEECCHHHHCCCEEEEEECCCCCHHH EVVKQMEGAKYFKMSYKYIVETLDPITVRFDDLYVTFR HHHHHHCCCEEEEHHHHHHHHCCCCEEEEEEEEEEEEC >Mature Secondary Structure STKRIRPAIYHYYPRGPHKNHMSMREEEYKTEVTFLPQALTDSIYVQLFDLKFEIPPSK CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHEEEECHHHCCEEEEEEEEEEEECCCCE IFLADAKMDEGDEMEMKTAVYVEGDRTVRFELYVMQYSDEERLSNKRFSLTLNPGMNPIE EEEEECCCCCCCCEEEEEEEEEECCCEEEEEEEEEEECCHHHHCCCEEEEEECCCCCHHH EVVKQMEGAKYFKMSYKYIVETLDPITVRFDDLYVTFR HHHHHHCCCEEEEHHHHHHHHCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA