| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916771
Identifier: 229916771
GI number: 229916771
Start: 992562
End: 993746
Strand: Direct
Name: 229916771
Synonym: EAT1b_1044
Alternate gene names: NA
Gene position: 992562-993746 (Clockwise)
Preceding gene: 229916770
Following gene: 229916780
Centisome position: 33.09
GC content: 56.88
Gene sequence:
>1185_bases ATGACGACACAACGCGTGACGTTCAAGACGTTACTAGAGATTTTATTCGTTTCAACGAGGCTCGGCCTCACCTCATTCGG TGGGCCGGTCGCCCACCTCGGTTACTTCCACGAGGAATATGTGAGACGACGCAAGTGGATGGACGAGAAAGCTTACGCCG ACCTCGTCGCCTTATGCCAATTCTTGCCCGGACCGGCCAGTTCACAGGTCGGGATCGGGATCGGGATTGTCCGCGGTGGC ATATTAGGTGGGATCACCTCGTTCATCGGCTTCACGACACCGTCGGTCGTTGCCCTCATCCTGTTCGCTTTATTGTTGTC TGGACTCGACGTGTCCGATGCAGGCTGGCTCTACGGCTTAAAAGTCGTCGCCGTCGCTATCGTCGCCCATGCCATCTTAG GGATGGCGAGTAAACTGACACCTGATACAAAGACACGAACGATCGCCTTTTTCGCCTTGGCGGGCGTCTTGCTCTGGCAG ACGACGTTCAGTCAGGTGTTGTTCATTCTCCTTGCGGCACTCGCAGGATTCCTGTTGTTCAAGCCGGACCGCCTCGATGC GAAATCGAGCGCGTTCCCGATTTCGAAACGACTCGGGGCCGTCTTGCTGTCGATATTTGGTGCACTTCTCGTCATCTTGC CGATTTTACGGGAGACGTTTGAAAACCAGACGATCGCCTTGTTCGATAGCTTTTACCGGGCCGGTGCCCTCGTCTTCGGC GGCGGACACGTGGTCTTGCCGTTACTTGAGCGTGAGCTCGTACCCGCTGGTTTCTTGAGTGAAGAAGCCTTCCTCGCAGG ATACGGTGCTGCTCAGGCCGTCCCTGGTCCGCTCTTCACGTTCGCTTCTTATCTTGGAACGGTGATTAACGGTGTGCCGG GTGGCATCCTGGCGACGGTCGCGATTTTCTTGCCGGCCTTCTTGCTCATCCTCGGGGCACTTCCGTTTTGGGACGCGCTC CGTCATAACCCGAAAGTCGCCGGCGCTCTTATCGGCGTCAACGCGGCAGTGGTCGGGATTTTGATCGCAGCATTCTACAG CCCGATCTTCACGAGTACCGTCAACGATGCGGTCGACTTCGTGTTCGCTGCCTTCCTGTTCGTCATGATCGCCTATTGGA AACTGCCCCCGTGGGCACTCGTCATCGCCGGGGTACTCGGTGGGACGTTGATTCAGCTGGTGTAA
Upstream 100 bases:
>100_bases GTTCGCAAAAATTACGTGACGACTGAAAAAGGACGTTCTGTGTTGGCGGAAGCCCGTCAAAAAGCATACGAGTTATTCAA AGAAATTAAGGAGTGAAGAC
Downstream 100 bases:
>100_bases ACGTAAAGAAGCGACCTGTCCTCGATGACGACAGGTCGCTTTTTTCATGATGAGGAGATGGGAGACATCCGTGTCACCCG AATCTGACTGAGCATGTCTT
Product: chromate transporter chromate ion transporter (CHR) family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTTQRVTFKTLLEILFVSTRLGLTSFGGPVAHLGYFHEEYVRRRKWMDEKAYADLVALCQFLPGPASSQVGIGIGIVRGG ILGGITSFIGFTTPSVVALILFALLLSGLDVSDAGWLYGLKVVAVAIVAHAILGMASKLTPDTKTRTIAFFALAGVLLWQ TTFSQVLFILLAALAGFLLFKPDRLDAKSSAFPISKRLGAVLLSIFGALLVILPILRETFENQTIALFDSFYRAGALVFG GGHVVLPLLERELVPAGFLSEEAFLAGYGAAQAVPGPLFTFASYLGTVINGVPGGILATVAIFLPAFLLILGALPFWDAL RHNPKVAGALIGVNAAVVGILIAAFYSPIFTSTVNDAVDFVFAAFLFVMIAYWKLPPWALVIAGVLGGTLIQLV
Sequences:
>Translated_394_residues MTTQRVTFKTLLEILFVSTRLGLTSFGGPVAHLGYFHEEYVRRRKWMDEKAYADLVALCQFLPGPASSQVGIGIGIVRGG ILGGITSFIGFTTPSVVALILFALLLSGLDVSDAGWLYGLKVVAVAIVAHAILGMASKLTPDTKTRTIAFFALAGVLLWQ TTFSQVLFILLAALAGFLLFKPDRLDAKSSAFPISKRLGAVLLSIFGALLVILPILRETFENQTIALFDSFYRAGALVFG GGHVVLPLLERELVPAGFLSEEAFLAGYGAAQAVPGPLFTFASYLGTVINGVPGGILATVAIFLPAFLLILGALPFWDAL RHNPKVAGALIGVNAAVVGILIAAFYSPIFTSTVNDAVDFVFAAFLFVMIAYWKLPPWALVIAGVLGGTLIQLV >Mature_393_residues TTQRVTFKTLLEILFVSTRLGLTSFGGPVAHLGYFHEEYVRRRKWMDEKAYADLVALCQFLPGPASSQVGIGIGIVRGGI LGGITSFIGFTTPSVVALILFALLLSGLDVSDAGWLYGLKVVAVAIVAHAILGMASKLTPDTKTRTIAFFALAGVLLWQT TFSQVLFILLAALAGFLLFKPDRLDAKSSAFPISKRLGAVLLSIFGALLVILPILRETFENQTIALFDSFYRAGALVFGG GHVVLPLLERELVPAGFLSEEAFLAGYGAAQAVPGPLFTFASYLGTVINGVPGGILATVAIFLPAFLLILGALPFWDALR HNPKVAGALIGVNAAVVGILIAAFYSPIFTSTVNDAVDFVFAAFLFVMIAYWKLPPWALVIAGVLGGTLIQLV
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 41881; Mature: 41750
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQRVTFKTLLEILFVSTRLGLTSFGGPVAHLGYFHEEYVRRRKWMDEKAYADLVALCQ CCCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FLPGPASSQVGIGIGIVRGGILGGITSFIGFTTPSVVALILFALLLSGLDVSDAGWLYGL HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH KVVAVAIVAHAILGMASKLTPDTKTRTIAFFALAGVLLWQTTFSQVLFILLAALAGFLLF HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KPDRLDAKSSAFPISKRLGAVLLSIFGALLVILPILRETFENQTIALFDSFYRAGALVFG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEC GGHVVLPLLERELVPAGFLSEEAFLAGYGAAQAVPGPLFTFASYLGTVINGVPGGILATV CCHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH AIFLPAFLLILGALPFWDALRHNPKVAGALIGVNAAVVGILIAAFYSPIFTSTVNDAVDF HHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFAAFLFVMIAYWKLPPWALVIAGVLGGTLIQLV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTQRVTFKTLLEILFVSTRLGLTSFGGPVAHLGYFHEEYVRRRKWMDEKAYADLVALCQ CCCHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FLPGPASSQVGIGIGIVRGGILGGITSFIGFTTPSVVALILFALLLSGLDVSDAGWLYGL HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH KVVAVAIVAHAILGMASKLTPDTKTRTIAFFALAGVLLWQTTFSQVLFILLAALAGFLLF HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KPDRLDAKSSAFPISKRLGAVLLSIFGALLVILPILRETFENQTIALFDSFYRAGALVFG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEC GGHVVLPLLERELVPAGFLSEEAFLAGYGAAQAVPGPLFTFASYLGTVINGVPGGILATV CCHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH AIFLPAFLLILGALPFWDALRHNPKVAGALIGVNAAVVGILIAAFYSPIFTSTVNDAVDF HHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFAAFLFVMIAYWKLPPWALVIAGVLGGTLIQLV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]