Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229916768

Identifier: 229916768

GI number: 229916768

Start: 988226

End: 989326

Strand: Direct

Name: 229916768

Synonym: EAT1b_1041

Alternate gene names: NA

Gene position: 988226-989326 (Clockwise)

Preceding gene: 229916767

Following gene: 229916770

Centisome position: 32.94

GC content: 54.59

Gene sequence:

>1101_bases
ATGGTACTCATTAGACATGTGGCCAAACGGATGCTTCGAAAGAAAGGACTGTGGGTGTTCACCTTCGTGTCGATGTTCGG
TTTCGCGCTCATCCTCTCCTTCGTCGGCGGAACGTCCAGTTTGAACGCATCGATCGGGATTGTCGACCGGGACGGTGGAC
TCCTCGCCGAACGCCTCATTGACGAGACCGAACGATTTGGTCGGGTCACATTGCTCGAGTCGAGCACAGAGGATGTCTTG
TTAGAAGGAGAAGACATCGTCCTCATCATTCCAGAAGACTTCACGGAACAGGCGTTCACAGGAGACATGCCCCGCCTCTC
CTTCTCTGCAATCGCCGGGAGTGATGCCTCGTTGATCGAGCAGGCGCTGAACGGTCATCTGTCCCGCGAACGTCAACTGC
TCGAAGCGAGCGGCTATGAGGAAGCGACGTTCGAAGAGCTCGCATCCATTGAGACGACGAACGGTTACACACTCAGAAGT
GAACCGTTCCAAGAAAGTGTCGCCACGACCGCTCGGACACAAGCCTTCTTCGGTCTATTGTCGTTCATCATGATGTCGAC
CTTTCTCCAGTTCATCCCCATGTTTGTCGCGGATGACCGGGACGAGAAGATCTATGCGCGGTTGTTCGCCTCACCGGTGA
CACCACGGCGTTATTTCGGCTCCCTGCTCTTCGCCTTTTATCTCGTCGGCTTCGTCTACGTGATGCTGTTGATTGGTGTG
AGCCTCGCTCTATACGGTCAGGACGTATGGACACATCTCCCGACCGTGTTCGCCTTGTTTTCTTCCTATCTGCTCGTCTG
TCTGGCACTCGGTGGCCTCATCGCCGTGTTGGCGACGAACCGGGAGAAGGCGAACATCTTTCAAATCTCGGTCACGATGG
CGTCCGCCATCACCGGCGGGGCGTTCATCAGTCTGCTCTGGTTACCCGATTCATTGAAACTCATCGGTCGTTTCCTACCG
ACCTATTGGTTGAATAACGGCGTCATCACGATGTATGAGGGACAGTTCCCGTTTCTCTCCATCCTTGTCATGATCGGCAT
GACCGGCATCGTCTTCCTCTTCACCATCCTCGTGTTGAAGAAACGACCTCTGACCGTTTGA

Upstream 100 bases:

>100_bases
GGGGACATGAATCTGTATTGGCAAAGCCTCGGATTGCTCGGGATTCATCTCCTTGTCTTGATCGTATTCAGCTACATTCT
CTCGAAAGGGGTGAAGCGTC

Downstream 100 bases:

>100_bases
AAAAGCGAGTCCCCCACATTCAGGAGGACTCGCTTGTTTATTGTTGAAGTGTCGGTACGACTTTTTCAAAGAAGACGTCG
ACGAGAGATGGGTCGAACTG

Product: ABC transporter

Products: NA

Alternate protein names: Permease; ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; Streptolysin S Export Transmembrane Protein; ABC-2 Type Transporter Protein

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MVLIRHVAKRMLRKKGLWVFTFVSMFGFALILSFVGGTSSLNASIGIVDRDGGLLAERLIDETERFGRVTLLESSTEDVL
LEGEDIVLIIPEDFTEQAFTGDMPRLSFSAIAGSDASLIEQALNGHLSRERQLLEASGYEEATFEELASIETTNGYTLRS
EPFQESVATTARTQAFFGLLSFIMMSTFLQFIPMFVADDRDEKIYARLFASPVTPRRYFGSLLFAFYLVGFVYVMLLIGV
SLALYGQDVWTHLPTVFALFSSYLLVCLALGGLIAVLATNREKANIFQISVTMASAITGGAFISLLWLPDSLKLIGRFLP
TYWLNNGVITMYEGQFPFLSILVMIGMTGIVFLFTILVLKKRPLTV

Sequences:

>Translated_366_residues
MVLIRHVAKRMLRKKGLWVFTFVSMFGFALILSFVGGTSSLNASIGIVDRDGGLLAERLIDETERFGRVTLLESSTEDVL
LEGEDIVLIIPEDFTEQAFTGDMPRLSFSAIAGSDASLIEQALNGHLSRERQLLEASGYEEATFEELASIETTNGYTLRS
EPFQESVATTARTQAFFGLLSFIMMSTFLQFIPMFVADDRDEKIYARLFASPVTPRRYFGSLLFAFYLVGFVYVMLLIGV
SLALYGQDVWTHLPTVFALFSSYLLVCLALGGLIAVLATNREKANIFQISVTMASAITGGAFISLLWLPDSLKLIGRFLP
TYWLNNGVITMYEGQFPFLSILVMIGMTGIVFLFTILVLKKRPLTV
>Mature_366_residues
MVLIRHVAKRMLRKKGLWVFTFVSMFGFALILSFVGGTSSLNASIGIVDRDGGLLAERLIDETERFGRVTLLESSTEDVL
LEGEDIVLIIPEDFTEQAFTGDMPRLSFSAIAGSDASLIEQALNGHLSRERQLLEASGYEEATFEELASIETTNGYTLRS
EPFQESVATTARTQAFFGLLSFIMMSTFLQFIPMFVADDRDEKIYARLFASPVTPRRYFGSLLFAFYLVGFVYVMLLIGV
SLALYGQDVWTHLPTVFALFSSYLLVCLALGGLIAVLATNREKANIFQISVTMASAITGGAFISLLWLPDSLKLIGRFLP
TYWLNNGVITMYEGQFPFLSILVMIGMTGIVFLFTILVLKKRPLTV

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40681; Mature: 40681

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLIRHVAKRMLRKKGLWVFTFVSMFGFALILSFVGGTSSLNASIGIVDRDGGLLAERLI
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHH
DETERFGRVTLLESSTEDVLLEGEDIVLIIPEDFTEQAFTGDMPRLSFSAIAGSDASLIE
HHHHHCCEEEEEECCCCCEEEECCCEEEECCCCCCHHHHCCCCCCCCHHHHCCCCHHHHH
QALNGHLSRERQLLEASGYEEATFEELASIETTNGYTLRSEPFQESVATTARTQAFFGLL
HHHHCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
SFIMMSTFLQFIPMFVADDRDEKIYARLFASPVTPRRYFGSLLFAFYLVGFVYVMLLIGV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLALYGQDVWTHLPTVFALFSSYLLVCLALGGLIAVLATNREKANIFQISVTMASAITGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHCH
AFISLLWLPDSLKLIGRFLPTYWLNNGVITMYEGQFPFLSILVMIGMTGIVFLFTILVLK
HHEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
KRPLTV
CCCCCC
>Mature Secondary Structure
MVLIRHVAKRMLRKKGLWVFTFVSMFGFALILSFVGGTSSLNASIGIVDRDGGLLAERLI
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHH
DETERFGRVTLLESSTEDVLLEGEDIVLIIPEDFTEQAFTGDMPRLSFSAIAGSDASLIE
HHHHHCCEEEEEECCCCCEEEECCCEEEECCCCCCHHHHCCCCCCCCHHHHCCCCHHHHH
QALNGHLSRERQLLEASGYEEATFEELASIETTNGYTLRSEPFQESVATTARTQAFFGLL
HHHHCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
SFIMMSTFLQFIPMFVADDRDEKIYARLFASPVTPRRYFGSLLFAFYLVGFVYVMLLIGV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLALYGQDVWTHLPTVFALFSSYLLVCLALGGLIAVLATNREKANIFQISVTMASAITGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHCH
AFISLLWLPDSLKLIGRFLPTYWLNNGVITMYEGQFPFLSILVMIGMTGIVFLFTILVLK
HHEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
KRPLTV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA