| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916767
Identifier: 229916767
GI number: 229916767
Start: 987106
End: 988239
Strand: Direct
Name: 229916767
Synonym: EAT1b_1040
Alternate gene names: NA
Gene position: 987106-988239 (Clockwise)
Preceding gene: 229916766
Following gene: 229916768
Centisome position: 32.9
GC content: 54.5
Gene sequence:
>1134_bases ATGTGGACCTTCATCAAATATGATGTGAAACAGCGACTACGGGACCGCGCCACCCTCTTTTGGATGCTCATCTTTCCGCT CATCCTCATCTTCGGACTGGGGACGATGCTGTCGGCCGTCTTCAGTGACACGTTCAAACTGCCGGTCACAAATGTCGCCT ACGTCGAATCGTCGACCGACCAGTATCGCGAGCCACTCGAGACCTTTTTAAAAGAAGAAGACATTCAAGCCTTCATCCGA CTCGTTCCATACGCTGACCTCCCATCTGCCGAACAAGGTGTGAACGATGGCGATGCCGACGTCATACTGCAACTCAACGG ACCTGACATCACGCTCTTTTATGAGGAACCGACGACGGTCGAGTTCGACGTCCTCGATGCCATCCTCGGTCAGTATACAG CCATCGCCAATCAACAGATCACGCTCGCCGAAGCAGGCGTGTCGGCTCCTTACGAGAATGAGGCGTGGCTCGATACGGAA AGTGTCGACCTGGCGGGACGCACCCCGACGTCGCTCGAGTATTTTACCGTCACCATCTCGATCATGACGGCATTGTTCGG GTCATTTTATATCACGGCGATGGCGCGTGAAGAACAGCCGAACACAGGCAGCTATTTGCGCATCCAAGCGGCACCCGTCC GAACGGTCGAGTATCGACTCGCGCGGACGTTCAGTCGCTACGTCATCATCTTGTTGCAGCTCATTCTCTTGTTTTGGTTC AGTCACTTCGTCTATCGCACATTCGACTTGGCGAACGTGCAGTTCGGCTATCTGATCCTGTCTTGGCTCGCCTTGACCGC GTACGGGGTCGCCATCGGATTCCTGATCGTCAACTTGCCGAAGTTGAGCGCGACGACAAAGGATGCGATCGTCAACGGCT TCGTCGCCATCCTCATGATTCTATCCGGTGGCTACGTCCCCGGTTTTGACCAAGTGACGCTGAACTACGCTCCCTGGGCC GCTTACGTGTTCATGCCGATCTTTATGCGGGACGGGATGCTAGCCGTCCTCCTGCGGGAAGGGGACATGAATCTGTATTG GCAAAGCCTCGGATTGCTCGGGATTCATCTCCTTGTCTTGATCGTATTCAGCTACATTCTCTCGAAAGGGGTGAAGCGTC ATGGTACTCATTAG
Upstream 100 bases:
>100_bases GAGCATGTTCACTTCACCTCCATCACGGTCGACCGCCCTTCCCTCAATACCGTCTTTTTGGCATTGACGGGGAAGACGCT TCGGGAATAGGAGGGGCGTC
Downstream 100 bases:
>100_bases ACATGTGGCCAAACGGATGCTTCGAAAGAAAGGACTGTGGGTGTTCACCTTCGTGTCGATGTTCGGTTTCGCGCTCATCC TCTCCTTCGTCGGCGGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MWTFIKYDVKQRLRDRATLFWMLIFPLILIFGLGTMLSAVFSDTFKLPVTNVAYVESSTDQYREPLETFLKEEDIQAFIR LVPYADLPSAEQGVNDGDADVILQLNGPDITLFYEEPTTVEFDVLDAILGQYTAIANQQITLAEAGVSAPYENEAWLDTE SVDLAGRTPTSLEYFTVTISIMTALFGSFYITAMAREEQPNTGSYLRIQAAPVRTVEYRLARTFSRYVIILLQLILLFWF SHFVYRTFDLANVQFGYLILSWLALTAYGVAIGFLIVNLPKLSATTKDAIVNGFVAILMILSGGYVPGFDQVTLNYAPWA AYVFMPIFMRDGMLAVLLREGDMNLYWQSLGLLGIHLLVLIVFSYILSKGVKRHGTH
Sequences:
>Translated_377_residues MWTFIKYDVKQRLRDRATLFWMLIFPLILIFGLGTMLSAVFSDTFKLPVTNVAYVESSTDQYREPLETFLKEEDIQAFIR LVPYADLPSAEQGVNDGDADVILQLNGPDITLFYEEPTTVEFDVLDAILGQYTAIANQQITLAEAGVSAPYENEAWLDTE SVDLAGRTPTSLEYFTVTISIMTALFGSFYITAMAREEQPNTGSYLRIQAAPVRTVEYRLARTFSRYVIILLQLILLFWF SHFVYRTFDLANVQFGYLILSWLALTAYGVAIGFLIVNLPKLSATTKDAIVNGFVAILMILSGGYVPGFDQVTLNYAPWA AYVFMPIFMRDGMLAVLLREGDMNLYWQSLGLLGIHLLVLIVFSYILSKGVKRHGTH >Mature_377_residues MWTFIKYDVKQRLRDRATLFWMLIFPLILIFGLGTMLSAVFSDTFKLPVTNVAYVESSTDQYREPLETFLKEEDIQAFIR LVPYADLPSAEQGVNDGDADVILQLNGPDITLFYEEPTTVEFDVLDAILGQYTAIANQQITLAEAGVSAPYENEAWLDTE SVDLAGRTPTSLEYFTVTISIMTALFGSFYITAMAREEQPNTGSYLRIQAAPVRTVEYRLARTFSRYVIILLQLILLFWF SHFVYRTFDLANVQFGYLILSWLALTAYGVAIGFLIVNLPKLSATTKDAIVNGFVAILMILSGGYVPGFDQVTLNYAPWA AYVFMPIFMRDGMLAVLLREGDMNLYWQSLGLLGIHLLVLIVFSYILSKGVKRHGTH
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42553; Mature: 42553
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTFIKYDVKQRLRDRATLFWMLIFPLILIFGLGTMLSAVFSDTFKLPVTNVAYVESSTD CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHH QYREPLETFLKEEDIQAFIRLVPYADLPSAEQGVNDGDADVILQLNGPDITLFYEEPTTV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEEECCCEEEEEECCCCEE EFDVLDAILGQYTAIANQQITLAEAGVSAPYENEAWLDTESVDLAGRTPTSLEYFTVTIS EHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH IMTALFGSFYITAMAREEQPNTGSYLRIQAAPVRTVEYRLARTFSRYVIILLQLILLFWF HHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SHFVYRTFDLANVQFGYLILSWLALTAYGVAIGFLIVNLPKLSATTKDAIVNGFVAILMI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LSGGYVPGFDQVTLNYAPWAAYVFMPIFMRDGMLAVLLREGDMNLYWQSLGLLGIHLLVL HHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH IVFSYILSKGVKRHGTH HHHHHHHHHCHHHCCCC >Mature Secondary Structure MWTFIKYDVKQRLRDRATLFWMLIFPLILIFGLGTMLSAVFSDTFKLPVTNVAYVESSTD CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHH QYREPLETFLKEEDIQAFIRLVPYADLPSAEQGVNDGDADVILQLNGPDITLFYEEPTTV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEEECCCEEEEEECCCCEE EFDVLDAILGQYTAIANQQITLAEAGVSAPYENEAWLDTESVDLAGRTPTSLEYFTVTIS EHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH IMTALFGSFYITAMAREEQPNTGSYLRIQAAPVRTVEYRLARTFSRYVIILLQLILLFWF HHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SHFVYRTFDLANVQFGYLILSWLALTAYGVAIGFLIVNLPKLSATTKDAIVNGFVAILMI HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH LSGGYVPGFDQVTLNYAPWAAYVFMPIFMRDGMLAVLLREGDMNLYWQSLGLLGIHLLVL HHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH IVFSYILSKGVKRHGTH HHHHHHHHHCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA