| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916737
Identifier: 229916737
GI number: 229916737
Start: 954687
End: 957008
Strand: Direct
Name: 229916737
Synonym: EAT1b_1010
Alternate gene names: NA
Gene position: 954687-957008 (Clockwise)
Preceding gene: 229916736
Following gene: 229916738
Centisome position: 31.82
GC content: 51.98
Gene sequence:
>2322_bases ATGCTGTATAAAAACGTCTGGAAGACATTGAGTCGGAAGTGGATGCAACTCCTCGCCATCGCCATCATCATCGTCATGAG TTCACTCACGTACACGATGATGTTCTATGGCATCAGCGGGATTGAGGTCCCGACCGAAGAGTATCTGGAAGAATCGAACC AAGAAGACTTTGCGATTGACATGCTCAATCGGGTGACGGAAGAAGAGTTACGCGACCCCGCTGTCGCCACGCTCGCGGAG ACAGGAGCGTTCACATTAGCTGACATCAAACAAGCCGACGCGGAAGTCTTCAATCGTCTGATCGCATCGCGAATCGCTGC CGTCGAACAGGAGATGCCGGATGCCACGATTGAACTCCGTGACTTGAAAGCCATCACCTACACGTTTGATGACACCGAGC ATCGGGGAATGATCGTCAAAGAATCAGACACGATCAACCGCTCCTACCTCGAAGCCGGTGAGCGACCGAGCGCGAATGAC GAAATCGCTTTGAACAAAAAATATGCAGAAGAGAATGGGATCGACATCGGGGACACGATTGACATCGGCAAACCGTTCAC GGTGAGTGGATTTGTCCTCTTTCCGGACTACACGCTCCCCCTGTTCGATGATAACTTCTTCAACTTGGACCCAGGTTCAC AGACCCTCCTCCTGATGACGGATGAATCGTTTGAAACATTCGTCGGGCAAGAGTCGTTCCGGCTGTCCGGGGTGACCGAT CAACCGATTAAGACCGACCTCGAGCTCCCGTTCGTCGTCTCGGTCATGGAGACGGAGAACATCATTCGAAGCGGTGCCAT CTACAGCGAGATTTCATCCGGCAAGGCGATGGCGCTCGGACTCAGTCTCTTTATCGTCTCGATCGCTGTCATCATCGTCG CCATCCTGATCTCGAATATGCTCGAGGCGGAACGAGGACAAATCGGACTATTGAAGGCGATTGGCTACAGTCGTCGTCAA ATCGCCTCTCCTTACTTGGTGCTCATCTTGATCTTCGCATTCTTTATGCTCATCATCGGTTATTTCCTGGGACTCTATTT CGCGAACCCGTTGAAAGAACTCTATCTCGACTTCTATCTCTTACCGTCCATCACCATCGCCCAAAGTCCACTCGTGTTCG TGACAGCCGTGTTCGCCCCGCTCCTCTTCTTTGCGCTCGTCGCGGGAGCCGTCATCTATAAAATTATGGGAGAGAGCGCC CTCGCCCTCTTGTCGCCACGGGACAACGTCTCATTGAATCGACTCAGCCGACTCGTCAGTCGACTGTTGAAACGGGCGAG TGGCAAGACGAAGTTCAAATATTTGTATGCCGTCAAGAGCACGGGGAGTTTCCTCATCTTCTTTCTCGGGATCCTCTTCT CGACGATTCTTATTGTTTTCGCCCTCATGATGAACGGGGCCGTCGACCGTATGACCGTCGGCGGATTGAACGAAGCGGTG TATGAATACGAGGCGTATACAGACGGGACACCGGTTTTAGAAGCGGGACAAGAACCGTTCCTCACCTATCCGTTCGCCTT TGTCGAAGATAACCTGATCACCTTGAAGGGACTCGACTTCGACAACACCTTGTTCCCCCTCCGAGACGAAGATGGGGATG CGTTGACACTCGAACCTGACGGCCTTGTCGTCTCTTCCTCACTCGCCCTGAAGCTCGGGCTCGACGTCGGTCAAGACATC GATGTCGCACTCGACGGAGACACGTTGACCTATCCCATCATCGGGATTGCCGATGAATTCTCTGGCGACTTCGCCTACTT GCCTCGGTCGACGTTAAGTGAACTACTCACGGACGGTTCGACGGATGACCTGTTCAACGGCATCTACGCGACGGAACGCC CGAACGAATCGGACTATCCGACCATCCTGTCACGTCAAGGGTTGATCGATCAGTCCGAATCGATCAATCAATATATGAAT TTCATGATGAACGTCTTAATCGGCGGGGCGTCCCTCATCGCTTTCAGCATCCTGTTCGTCTTGACGGCGCTGACGGTCGA GAAGAACTATTATGTCATCTCCTTGTTGAAAGTGATGGGATATGAGAAACGGGAAGTCCGCTCCATGATCTTGAATAGCT ACTTCATCTATGCGCTTATCTCCGCCCTCTTGAGCATCCCCATCGCCCTGTTGACGCTTCGGGTCATCATCGTCGTCTTT GCAGAAGATTATGGACTCGTGCTCCCACTTGAATTCGAATGGGTCTATATCGTCTATACGCTCGGCGCTGTCGTTCTCCT CTTCTTCATGAGTACGTTCATCAGTCGCCGGAAAATCGATCAAATCCCACTTCAGGAAGTTTTAAAGACGTATCAAGAAT AA
Upstream 100 bases:
>100_bases CGATGTCATCAAGATGAACTCTGGTCGGATTGTGGAAGTGACCCATCATGAGACCCGGGTCGCGGCACGTGACATCCATT GGGGATAAGGGGGTGGCGAC
Downstream 100 bases:
>100_bases TTCATGCCGAAATAGGGCATAATAAGAGATAGACCAGGTCTCTCCTGAGGAGGGACCTGACTTTTGCAGAAAAGGATGAT ATACATGAATCGTACACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Efflux ABC Transporter Permease Protein; ABC Transporter Permease; ABC Transporter Permease Protein
Number of amino acids: Translated: 773; Mature: 773
Protein sequence:
>773_residues MLYKNVWKTLSRKWMQLLAIAIIIVMSSLTYTMMFYGISGIEVPTEEYLEESNQEDFAIDMLNRVTEEELRDPAVATLAE TGAFTLADIKQADAEVFNRLIASRIAAVEQEMPDATIELRDLKAITYTFDDTEHRGMIVKESDTINRSYLEAGERPSAND EIALNKKYAEENGIDIGDTIDIGKPFTVSGFVLFPDYTLPLFDDNFFNLDPGSQTLLLMTDESFETFVGQESFRLSGVTD QPIKTDLELPFVVSVMETENIIRSGAIYSEISSGKAMALGLSLFIVSIAVIIVAILISNMLEAERGQIGLLKAIGYSRRQ IASPYLVLILIFAFFMLIIGYFLGLYFANPLKELYLDFYLLPSITIAQSPLVFVTAVFAPLLFFALVAGAVIYKIMGESA LALLSPRDNVSLNRLSRLVSRLLKRASGKTKFKYLYAVKSTGSFLIFFLGILFSTILIVFALMMNGAVDRMTVGGLNEAV YEYEAYTDGTPVLEAGQEPFLTYPFAFVEDNLITLKGLDFDNTLFPLRDEDGDALTLEPDGLVVSSSLALKLGLDVGQDI DVALDGDTLTYPIIGIADEFSGDFAYLPRSTLSELLTDGSTDDLFNGIYATERPNESDYPTILSRQGLIDQSESINQYMN FMMNVLIGGASLIAFSILFVLTALTVEKNYYVISLLKVMGYEKREVRSMILNSYFIYALISALLSIPIALLTLRVIIVVF AEDYGLVLPLEFEWVYIVYTLGAVVLLFFMSTFISRRKIDQIPLQEVLKTYQE
Sequences:
>Translated_773_residues MLYKNVWKTLSRKWMQLLAIAIIIVMSSLTYTMMFYGISGIEVPTEEYLEESNQEDFAIDMLNRVTEEELRDPAVATLAE TGAFTLADIKQADAEVFNRLIASRIAAVEQEMPDATIELRDLKAITYTFDDTEHRGMIVKESDTINRSYLEAGERPSAND EIALNKKYAEENGIDIGDTIDIGKPFTVSGFVLFPDYTLPLFDDNFFNLDPGSQTLLLMTDESFETFVGQESFRLSGVTD QPIKTDLELPFVVSVMETENIIRSGAIYSEISSGKAMALGLSLFIVSIAVIIVAILISNMLEAERGQIGLLKAIGYSRRQ IASPYLVLILIFAFFMLIIGYFLGLYFANPLKELYLDFYLLPSITIAQSPLVFVTAVFAPLLFFALVAGAVIYKIMGESA LALLSPRDNVSLNRLSRLVSRLLKRASGKTKFKYLYAVKSTGSFLIFFLGILFSTILIVFALMMNGAVDRMTVGGLNEAV YEYEAYTDGTPVLEAGQEPFLTYPFAFVEDNLITLKGLDFDNTLFPLRDEDGDALTLEPDGLVVSSSLALKLGLDVGQDI DVALDGDTLTYPIIGIADEFSGDFAYLPRSTLSELLTDGSTDDLFNGIYATERPNESDYPTILSRQGLIDQSESINQYMN FMMNVLIGGASLIAFSILFVLTALTVEKNYYVISLLKVMGYEKREVRSMILNSYFIYALISALLSIPIALLTLRVIIVVF AEDYGLVLPLEFEWVYIVYTLGAVVLLFFMSTFISRRKIDQIPLQEVLKTYQE >Mature_773_residues MLYKNVWKTLSRKWMQLLAIAIIIVMSSLTYTMMFYGISGIEVPTEEYLEESNQEDFAIDMLNRVTEEELRDPAVATLAE TGAFTLADIKQADAEVFNRLIASRIAAVEQEMPDATIELRDLKAITYTFDDTEHRGMIVKESDTINRSYLEAGERPSAND EIALNKKYAEENGIDIGDTIDIGKPFTVSGFVLFPDYTLPLFDDNFFNLDPGSQTLLLMTDESFETFVGQESFRLSGVTD QPIKTDLELPFVVSVMETENIIRSGAIYSEISSGKAMALGLSLFIVSIAVIIVAILISNMLEAERGQIGLLKAIGYSRRQ IASPYLVLILIFAFFMLIIGYFLGLYFANPLKELYLDFYLLPSITIAQSPLVFVTAVFAPLLFFALVAGAVIYKIMGESA LALLSPRDNVSLNRLSRLVSRLLKRASGKTKFKYLYAVKSTGSFLIFFLGILFSTILIVFALMMNGAVDRMTVGGLNEAV YEYEAYTDGTPVLEAGQEPFLTYPFAFVEDNLITLKGLDFDNTLFPLRDEDGDALTLEPDGLVVSSSLALKLGLDVGQDI DVALDGDTLTYPIIGIADEFSGDFAYLPRSTLSELLTDGSTDDLFNGIYATERPNESDYPTILSRQGLIDQSESINQYMN FMMNVLIGGASLIAFSILFVLTALTVEKNYYVISLLKVMGYEKREVRSMILNSYFIYALISALLSIPIALLTLRVIIVVF AEDYGLVLPLEFEWVYIVYTLGAVVLLFFMSTFISRRKIDQIPLQEVLKTYQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86240; Mature: 86240
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYKNVWKTLSRKWMQLLAIAIIIVMSSLTYTMMFYGISGIEVPTEEYLEESNQEDFAID CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHH MLNRVTEEELRDPAVATLAETGAFTLADIKQADAEVFNRLIASRIAAVEQEMPDATIELR HHHHHHHHHHCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE DLKAITYTFDDTEHRGMIVKESDTINRSYLEAGERPSANDEIALNKKYAEENGIDIGDTI EEEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCCCCCCCEEEEHHHHHCCCCCCCCCC DIGKPFTVSGFVLFPDYTLPLFDDNFFNLDPGSQTLLLMTDESFETFVGQESFRLSGVTD CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCEEECCCCC QPIKTDLELPFVVSVMETENIIRSGAIYSEISSGKAMALGLSLFIVSIAVIIVAILISNM CCCCCCCCCCCEEEHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LEAERGQIGLLKAIGYSRRQIASPYLVLILIFAFFMLIIGYFLGLYFANPLKELYLDFYL HHHCCCCEEEHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSITIAQSPLVFVTAVFAPLLFFALVAGAVIYKIMGESALALLSPRDNVSLNRLSRLVS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH RLLKRASGKTKFKYLYAVKSTGSFLIFFLGILFSTILIVFALMMNGAVDRMTVGGLNEAV HHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHH YEYEAYTDGTPVLEAGQEPFLTYPFAFVEDNLITLKGLDFDNTLFPLRDEDGDALTLEPD HHHHCCCCCCCHHHCCCCCCEECCHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEECCC GLVVSSSLALKLGLDVGQDIDVALDGDTLTYPIIGIADEFSGDFAYLPRSTLSELLTDGS CEEEECCEEEEECCCCCCCCEEEECCCEEEEEEEEECCCCCCCEEECCHHHHHHHHCCCC TDDLFNGIYATERPNESDYPTILSRQGLIDQSESINQYMNFMMNVLIGGASLIAFSILFV CHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LTALTVEKNYYVISLLKVMGYEKREVRSMILNSYFIYALISALLSIPIALLTLRVIIVVF HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE AEDYGLVLPLEFEWVYIVYTLGAVVLLFFMSTFISRRKIDQIPLQEVLKTYQE ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MLYKNVWKTLSRKWMQLLAIAIIIVMSSLTYTMMFYGISGIEVPTEEYLEESNQEDFAID CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHH MLNRVTEEELRDPAVATLAETGAFTLADIKQADAEVFNRLIASRIAAVEQEMPDATIELR HHHHHHHHHHCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE DLKAITYTFDDTEHRGMIVKESDTINRSYLEAGERPSANDEIALNKKYAEENGIDIGDTI EEEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCCCCCCCEEEEHHHHHCCCCCCCCCC DIGKPFTVSGFVLFPDYTLPLFDDNFFNLDPGSQTLLLMTDESFETFVGQESFRLSGVTD CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCEEECCCCC QPIKTDLELPFVVSVMETENIIRSGAIYSEISSGKAMALGLSLFIVSIAVIIVAILISNM CCCCCCCCCCCEEEHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LEAERGQIGLLKAIGYSRRQIASPYLVLILIFAFFMLIIGYFLGLYFANPLKELYLDFYL HHHCCCCEEEHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSITIAQSPLVFVTAVFAPLLFFALVAGAVIYKIMGESALALLSPRDNVSLNRLSRLVS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH RLLKRASGKTKFKYLYAVKSTGSFLIFFLGILFSTILIVFALMMNGAVDRMTVGGLNEAV HHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHH YEYEAYTDGTPVLEAGQEPFLTYPFAFVEDNLITLKGLDFDNTLFPLRDEDGDALTLEPD HHHHCCCCCCCHHHCCCCCCEECCHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEECCC GLVVSSSLALKLGLDVGQDIDVALDGDTLTYPIIGIADEFSGDFAYLPRSTLSELLTDGS CEEEECCEEEEECCCCCCCCEEEECCCEEEEEEEEECCCCCCCEEECCHHHHHHHHCCCC TDDLFNGIYATERPNESDYPTILSRQGLIDQSESINQYMNFMMNVLIGGASLIAFSILFV CHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LTALTVEKNYYVISLLKVMGYEKREVRSMILNSYFIYALISALLSIPIALLTLRVIIVVF HHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE AEDYGLVLPLEFEWVYIVYTLGAVVLLFFMSTFISRRKIDQIPLQEVLKTYQE ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA