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The map label for this gene is yedQ [H]

Identifier: 229916734

GI number: 229916734

Start: 951016

End: 952695

Strand: Reverse

Name: yedQ [H]

Synonym: EAT1b_1007

Alternate gene names: 229916734

Gene position: 952695-951016 (Counterclockwise)

Preceding gene: 229916735

Following gene: 229916732

Centisome position: 31.76

GC content: 51.79

Gene sequence:

>1680_bases
ATGCGATTTCGGAAGTACCTAGTTCGGAGCTGGCTCGCGTGGACACTCGTCTTCACGGGAGTGACGTATTTGACTTTCCA
AAACCTTGAGGCGTTCGACTGGCCGTTGTTTTGGTTCATCTATACGCTTGGGGCACTGTTCGTCATGAATCCCTTAAAGC
GCAGGCATCTTCACTTCACGTTTCATGAGATGTTTGTCTTTATCACATTCTTCTTATATGGGCTCGCACCCGCCCTGTTG
ATGGGGCAACTGCTCCTCTTCACGTTTCAGGCGCGAGCCTTCAATCGTCGCGTCGGGCGTCGACGGTTCCTTCATTTCTA
TCCGCTCAACACGGTGATTGAATGTCTGCTCGTCTTGTTGCCGGGGCTGGCCTATATCGCGCTCGGTGGACGAATCGGAG
AGCCCGTTCATTTGATGCAACAAGGCGTGGCCATGTTGGCGTTTTTAGGGACCTTGTTCCTCGTCCTGACGATGAGTTTC
GCTTTATCCTACTTCATGGTCGGAGAACGGATCCCGTTCCCGATTATGTGGCGACTGATCCGCTTTGACTGGCTTGTCGT
ATCACTCGAACTACTGTTCACGATGATTGCCATCGAGTCGTATCTCGTCTTCGATTATGTCGGACTCATCATCACGTTCT
TCATATTATCTGTTCTGAAAATGACGATGTCGAAAGCGACGGAGACGGAAGAGACCAAATCGAGAGTCGACCAAGTCGAA
CGCTTGAAGGAACAGTTGTACCGTGTGGACAGCGAGCAACTGTTGATTGAGAAGTTTTGGAACGGTCTTCGTGATATCGT
CGAAGTGGAACGAGGATGGTTACAGGTCAATCGAAAAGGGGAGCGGACGTTTTATGATATGACGGGGCGCGTCATCCCGA
GTGTGCCGGATGCCTTCACGATTGAACGCTATCAAGATGAGGACGAGCCATGCTTCGTTTATGACTCGCTTCATGAATGG
CATCCCGAATTGCAGCAACAGCAACAAGAACTACATCATTCGGCGCTCGTCATCCAACCCGTTTGGGGAGCGGAGACGGC
GGTCAGCTGCATGGTATCGACGACAGCAAACGGGGCATACGAGATCCCGATTGCGGTTGAGGTGAACCGTCTTCTCAAGA
CGTTATCGTGGTCCATCGAGCGCATCGACGAACGCAACCGTTTGCAACATGAGAGCTTGACGGATCCGTTGACGGGATTA
CATAATCAGCGAGCGTTACGCCGTTGGACGAAAGAACGATTGAACGATGTGGCGTCCTATCCGCTCTCTGTCTTCTTGAT
TGATTTGGATCACTTCAAGTCAATCAACGACACGTACGGACATGCGTTCGGGGACGAGGTGCTGATTGAAGCAGGTCAAC
TCTTCACTCGTAGCGTCCGAGCGACGGACTTGGTGACGCGTTATGGAGGCGAGGAGTTCGTATTCGTCTTCCCGAGAATG
GATGAGGCGGCCGCCCATCTGGTCGGTGAAAAGATACGAGACGCCTTGAAGCGCCATGATTTTGGGACGGAAGGGACGCG
TATCACGGTGACGGCGAGTATCGGGATCGAAACGATTTATGAATATGAAGACCTCGATACAGTTTTGCGACATGCGGACC
GGGCCATGTATGTCGGGGCGAAATTCAACGGTCGAGATCGTGTCGCCCACTATCATGATCTATCGACTGAAGTCAGATAA

Upstream 100 bases:

>100_bases
TCTTTCAATATTTCATTGTCTCAACTTTCAAACAATTGCTGGAATGTTTTTGCAATACGGGTCATACTAGAAAAAATGAA
CGAGAAAAGGGGAGAAGACG

Downstream 100 bases:

>100_bases
AAGGAGGATCCACCGATTGGGGGACCCTCCTTTTGTATGAAATGATTATGAGTTCGTATTATAAAGTTCAGATTCAACCG
CATGAACGGCGGCTGACCAG

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MRFRKYLVRSWLAWTLVFTGVTYLTFQNLEAFDWPLFWFIYTLGALFVMNPLKRRHLHFTFHEMFVFITFFLYGLAPALL
MGQLLLFTFQARAFNRRVGRRRFLHFYPLNTVIECLLVLLPGLAYIALGGRIGEPVHLMQQGVAMLAFLGTLFLVLTMSF
ALSYFMVGERIPFPIMWRLIRFDWLVVSLELLFTMIAIESYLVFDYVGLIITFFILSVLKMTMSKATETEETKSRVDQVE
RLKEQLYRVDSEQLLIEKFWNGLRDIVEVERGWLQVNRKGERTFYDMTGRVIPSVPDAFTIERYQDEDEPCFVYDSLHEW
HPELQQQQQELHHSALVIQPVWGAETAVSCMVSTTANGAYEIPIAVEVNRLLKTLSWSIERIDERNRLQHESLTDPLTGL
HNQRALRRWTKERLNDVASYPLSVFLIDLDHFKSINDTYGHAFGDEVLIEAGQLFTRSVRATDLVTRYGGEEFVFVFPRM
DEAAAHLVGEKIRDALKRHDFGTEGTRITVTASIGIETIYEYEDLDTVLRHADRAMYVGAKFNGRDRVAHYHDLSTEVR

Sequences:

>Translated_559_residues
MRFRKYLVRSWLAWTLVFTGVTYLTFQNLEAFDWPLFWFIYTLGALFVMNPLKRRHLHFTFHEMFVFITFFLYGLAPALL
MGQLLLFTFQARAFNRRVGRRRFLHFYPLNTVIECLLVLLPGLAYIALGGRIGEPVHLMQQGVAMLAFLGTLFLVLTMSF
ALSYFMVGERIPFPIMWRLIRFDWLVVSLELLFTMIAIESYLVFDYVGLIITFFILSVLKMTMSKATETEETKSRVDQVE
RLKEQLYRVDSEQLLIEKFWNGLRDIVEVERGWLQVNRKGERTFYDMTGRVIPSVPDAFTIERYQDEDEPCFVYDSLHEW
HPELQQQQQELHHSALVIQPVWGAETAVSCMVSTTANGAYEIPIAVEVNRLLKTLSWSIERIDERNRLQHESLTDPLTGL
HNQRALRRWTKERLNDVASYPLSVFLIDLDHFKSINDTYGHAFGDEVLIEAGQLFTRSVRATDLVTRYGGEEFVFVFPRM
DEAAAHLVGEKIRDALKRHDFGTEGTRITVTASIGIETIYEYEDLDTVLRHADRAMYVGAKFNGRDRVAHYHDLSTEVR
>Mature_559_residues
MRFRKYLVRSWLAWTLVFTGVTYLTFQNLEAFDWPLFWFIYTLGALFVMNPLKRRHLHFTFHEMFVFITFFLYGLAPALL
MGQLLLFTFQARAFNRRVGRRRFLHFYPLNTVIECLLVLLPGLAYIALGGRIGEPVHLMQQGVAMLAFLGTLFLVLTMSF
ALSYFMVGERIPFPIMWRLIRFDWLVVSLELLFTMIAIESYLVFDYVGLIITFFILSVLKMTMSKATETEETKSRVDQVE
RLKEQLYRVDSEQLLIEKFWNGLRDIVEVERGWLQVNRKGERTFYDMTGRVIPSVPDAFTIERYQDEDEPCFVYDSLHEW
HPELQQQQQELHHSALVIQPVWGAETAVSCMVSTTANGAYEIPIAVEVNRLLKTLSWSIERIDERNRLQHESLTDPLTGL
HNQRALRRWTKERLNDVASYPLSVFLIDLDHFKSINDTYGHAFGDEVLIEAGQLFTRSVRATDLVTRYGGEEFVFVFPRM
DEAAAHLVGEKIRDALKRHDFGTEGTRITVTASIGIETIYEYEDLDTVLRHADRAMYVGAKFNGRDRVAHYHDLSTEVR

Specific function: Involves in the regulation of cellulose production [H]

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI145693134, Length=163, Percent_Identity=38.0368098159509, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI87082007, Length=172, Percent_Identity=37.7906976744186, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI87081881, Length=202, Percent_Identity=35.6435643564356, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1787816, Length=157, Percent_Identity=35.6687898089172, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787262, Length=158, Percent_Identity=31.6455696202532, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1788381, Length=209, Percent_Identity=30.1435406698565, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1787802, Length=133, Percent_Identity=34.5864661654135, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787541, Length=162, Percent_Identity=31.4814814814815, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1786584, Length=168, Percent_Identity=27.9761904761905, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1788085, Length=192, Percent_Identity=26.5625, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788956, Length=176, Percent_Identity=30.6818181818182, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081977, Length=177, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI87081974, Length=153, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 65219; Mature: 65219

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECCCCCCHHHHCCCCCCC
>Mature Secondary Structure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EECCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA