Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yyaP [H]

Identifier: 229916714

GI number: 229916714

Start: 926996

End: 927589

Strand: Reverse

Name: yyaP [H]

Synonym: EAT1b_0987

Alternate gene names: 229916714

Gene position: 927589-926996 (Counterclockwise)

Preceding gene: 229916715

Following gene: 229916713

Centisome position: 30.92

GC content: 50.51

Gene sequence:

>594_bases
ATGAGGAAAATCATTGTTCTGGAACATTTATCGTTAGACGGTGTCATTCAAGCACCGGGTGGGAAAGAAGAGGACTTGAG
TGGGGATTTTATGCATGGGGGATGGACGGAGCCGTTTTCGAGTCAAGAGCTTGGCATTTGGATTCGGACGCAAATGCATA
GTGAGTTTGATTTGTTGCTCGGTCGAAAGACATATGCTCAGTGGGCGAGTTATTGGCCGAATCACGATGACATTTGGCCG
GAAGCCAACCGGGCGATGAAGTATGTGATCACGCGGCAGTCAACGGACTCACGATGGGAATCAACGACGTTTCTGACAGA
GCCAGTCGAAGCGTTGAAACGACTCAAACAAGAAGAGGGACCCGATTTACACGTCTGGGGAAGCGGTGAACTCGTGCACA
CGCTACTCGCAAACAATCTCATCGATGAAGTTCGACTGATCGTGTATCCCATCATCATCGGGTCAGGCAAACGACTTTTC
CCAGACGGCAACATCTTGCCACTGCAACTTGACGTGATTGAGCAACAGCTGATGCCGAACGGGGTCCATGTCGTTCGGTA
TGGACGCCTTCAATCGGAAGGGGAGAAGAGATGA

Upstream 100 bases:

>100_bases
GGTAGCTTGGTTGGAAAAAGTAGAATAAGATGAATGTATCATGCCTTCGATTGACTCAATCGAGGGCTTTTTTTGCAAAC
AGCCGAAAGGGGAGTCGGAG

Downstream 100 bases:

>100_bases
GAATCGAGCAACATCTCGAAATGACCCTTTCAGAATCGATGGATAAGGAGCTGACCGAGCTACTGCAACACGCGTTTCCT
TCCATCTATCCGAATCGTCG

Product: bifunctional deaminase-reductase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRKIIVLEHLSLDGVIQAPGGKEEDLSGDFMHGGWTEPFSSQELGIWIRTQMHSEFDLLLGRKTYAQWASYWPNHDDIWP
EANRAMKYVITRQSTDSRWESTTFLTEPVEALKRLKQEEGPDLHVWGSGELVHTLLANNLIDEVRLIVYPIIIGSGKRLF
PDGNILPLQLDVIEQQLMPNGVHVVRYGRLQSEGEKR

Sequences:

>Translated_197_residues
MRKIIVLEHLSLDGVIQAPGGKEEDLSGDFMHGGWTEPFSSQELGIWIRTQMHSEFDLLLGRKTYAQWASYWPNHDDIWP
EANRAMKYVITRQSTDSRWESTTFLTEPVEALKRLKQEEGPDLHVWGSGELVHTLLANNLIDEVRLIVYPIIIGSGKRLF
PDGNILPLQLDVIEQQLMPNGVHVVRYGRLQSEGEKR
>Mature_197_residues
MRKIIVLEHLSLDGVIQAPGGKEEDLSGDFMHGGWTEPFSSQELGIWIRTQMHSEFDLLLGRKTYAQWASYWPNHDDIWP
EANRAMKYVITRQSTDSRWESTTFLTEPVEALKRLKQEEGPDLHVWGSGELVHTLLANNLIDEVRLIVYPIIIGSGKRLF
PDGNILPLQLDVIEQQLMPNGVHVVRYGRLQSEGEKR

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywjB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 22586; Mature: 22586

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIIVLEHLSLDGVIQAPGGKEEDLSGDFMHGGWTEPFSSQELGIWIRTQMHSEFDLLL
CCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHH
GRKTYAQWASYWPNHDDIWPEANRAMKYVITRQSTDSRWESTTFLTEPVEALKRLKQEEG
CCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDLHVWGSGELVHTLLANNLIDEVRLIVYPIIIGSGKRLFPDGNILPLQLDVIEQQLMPN
CCEEEECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCCEEEEEHHHHHHHHCCC
GVHVVRYGRLQSEGEKR
CEEEEEECCCCCCCCCC
>Mature Secondary Structure
MRKIIVLEHLSLDGVIQAPGGKEEDLSGDFMHGGWTEPFSSQELGIWIRTQMHSEFDLLL
CCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHH
GRKTYAQWASYWPNHDDIWPEANRAMKYVITRQSTDSRWESTTFLTEPVEALKRLKQEEG
CCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDLHVWGSGELVHTLLANNLIDEVRLIVYPIIIGSGKRLFPDGNILPLQLDVIEQQLMPN
CCEEEECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCCEEEEEHHHHHHHHCCC
GVHVVRYGRLQSEGEKR
CEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]