| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916711
Identifier: 229916711
GI number: 229916711
Start: 925406
End: 925846
Strand: Reverse
Name: 229916711
Synonym: EAT1b_0984
Alternate gene names: NA
Gene position: 925846-925406 (Counterclockwise)
Preceding gene: 229916712
Following gene: 229916708
Centisome position: 30.86
GC content: 50.11
Gene sequence:
>441_bases ATGAAGCAATATACGATTCGAACTCGTAACGTCCCGCTTTCCCTGCATGATGCGGTCATCACAGAAGCGACTGTGACGGG TTCGACAATCCGTCTCGTCTTTATGGATGGGATCCGTGACTTGTTCAAAAAGGAAGCGGTATGGACGGGTCGTGCCACCG TGACCATCTCGAACGTGGACTGGGATACTTCGTCGCTCGTCCGTTTTGGTGAATCCACTTATTCGGTGTGTCCAATCGAA CAATTGAGCCAGTTCGTTCAAATGGGGCGCTTCGAAATCGTCGATGAACTGTACGGATATCGGCAACTGTTGTTCCGCTG CATGTGGTTGACGGATACGACGTGTGAAGCAGTGGAGCTGAGTCTATCTCATGTAAGTGAGCTCGTCATTCGATGGGAAG ACGAGCCGGTCGAAGCGATGTATCAATCTGAATCATTTTGA
Upstream 100 bases:
>100_bases GGGAAAGACGTGGATGTAGCCGAAGTGAAGAAGACGATGAAGGGACCGAGTTATTTAAAAGCAGTTGAGCATTATGTGTT TCAAAAAAAGGAGGGATTGA
Downstream 100 bases:
>100_bases GGAAAGTGTGAGACCGACGCGATCGGCGACCGCTTGCGCAACATCCTGTTTTGATCGATGGTCCGTTATAATTTTTTCTG CACGGATGTCAGATTCGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKQYTIRTRNVPLSLHDAVITEATVTGSTIRLVFMDGIRDLFKKEAVWTGRATVTISNVDWDTSSLVRFGESTYSVCPIE QLSQFVQMGRFEIVDELYGYRQLLFRCMWLTDTTCEAVELSLSHVSELVIRWEDEPVEAMYQSESF
Sequences:
>Translated_146_residues MKQYTIRTRNVPLSLHDAVITEATVTGSTIRLVFMDGIRDLFKKEAVWTGRATVTISNVDWDTSSLVRFGESTYSVCPIE QLSQFVQMGRFEIVDELYGYRQLLFRCMWLTDTTCEAVELSLSHVSELVIRWEDEPVEAMYQSESF >Mature_146_residues MKQYTIRTRNVPLSLHDAVITEATVTGSTIRLVFMDGIRDLFKKEAVWTGRATVTISNVDWDTSSLVRFGESTYSVCPIE QLSQFVQMGRFEIVDELYGYRQLLFRCMWLTDTTCEAVELSLSHVSELVIRWEDEPVEAMYQSESF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16862; Mature: 16862
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQYTIRTRNVPLSLHDAVITEATVTGSTIRLVFMDGIRDLFKKEAVWTGRATVTISNVD CCCEEEEECCCCEEHHHHHHHHEEECCCEEEEEEHHHHHHHHHHHCEECCCEEEEEECCC WDTSSLVRFGESTYSVCPIEQLSQFVQMGRFEIVDELYGYRQLLFRCMWLTDTTCEAVEL CCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SLSHVSELVIRWEDEPVEAMYQSESF HHHHHHHHHHCCCCCHHHHHHCCCCC >Mature Secondary Structure MKQYTIRTRNVPLSLHDAVITEATVTGSTIRLVFMDGIRDLFKKEAVWTGRATVTISNVD CCCEEEEECCCCEEHHHHHHHHEEECCCEEEEEEHHHHHHHHHHHCEECCCEEEEEECCC WDTSSLVRFGESTYSVCPIEQLSQFVQMGRFEIVDELYGYRQLLFRCMWLTDTTCEAVEL CCHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SLSHVSELVIRWEDEPVEAMYQSESF HHHHHHHHHHCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA