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The map label for this gene is ytbD [H]

Identifier: 229916692

GI number: 229916692

Start: 911059

End: 912261

Strand: Direct

Name: ytbD [H]

Synonym: EAT1b_0965

Alternate gene names: 229916692

Gene position: 911059-912261 (Clockwise)

Preceding gene: 229916686

Following gene: 229916693

Centisome position: 30.37

GC content: 51.79

Gene sequence:

>1203_bases
ATGAACCAACCTTATTCACAACCCGTTGAAGAACAGGCACCTAAAAATGGAGGATTAGCGTTACTCGCCCTCGCCATCAG
TGCTTTCGGCATCGGGACGACCGAATTCGTCCCAGTCGGACTGCTCGCATCCATCGCAAATGATTTAAACATCGGCATCA
CACTCGCGGGTCTCATTATCTCGGGATACGCGATCGGCGTCGCCGTCGGTGCACCGATTTTGACGGCACTGACGAACCGG
ATGAACCGTAAGACGTTACTCATGGCACTCATGGTCGTCTTTATCGGCGGAAACTTGGTCTCGGCCATGTCGACCAGCTT
TGAACTGTTGATTGTCGCCCGATTTATCACCGCATTCTCGCATGGTGTCTTCTTCTCAATCGGCGCAACGATTGCCGTAC
AACTAGTACCACCGCATAAAAAAGCGAGTGCCATCGCACTCATGTTCACAGGTTTAACCGTCGCAACCGTTACAGGGGTC
CCACTCGGTACCTTCATCGGACAAGCGTTCGGATGGCGTGCCACATTCTTCGCCGTCGCAGCACTCGGTGTCGTTTCAAT
CATCGCAAGCTTCTTCTTGATCCCGAAAGATTTGAAACAATCACCACCAGCGAAGTTCTCTGATATGAAGAAATTACTCA
CGAACGGTCGTCTCATGCTCGGATTCTTGATCACAGCACTCGGTTACGGCGGAACGTTCGTCGCCTTCACGTACTTGACT
CCCATCATGCAAGACGTGACAAAAATTAGCCCGAGCTTGATCAGCGTCGTCTTACTCGTTTACGGAATCGCGGTCGCTAT
CGGGAACGCGGTCGGCGGAAAACTCGCCAACGAAAACCCGGCGAAAGCATTGTTCTATATGTTCATCGTTCACGCAGCGG
TCATGATCATCATGTCGTTCATGATTCCGTTCAAAGTGGCAGGTCTGATCGCCATCGTCTTGATGGGTCTCCTCGCCTTC
ATGAACGTGCCTGGACTTCAACTGTATATCGTGCAATTGGCTGAAAAATATGTACCTGCCGCTGTCGATGTCGCGTCCGC
ACTCAACATCGCGGCCTTCAACATCGGGATTGCCCTTGGTGCGACAATCGGTGGACTCGTCGCTGATTCAATTGGACTCG
TCCACACACCTTGGGTCGGTGGAATCATGGTCATCATCGCAGTCATCTTGACAGCCATCTCACGTCGTATGGAAGCCAAA
TAA

Upstream 100 bases:

>100_bases
ACCGTACTGAACAATAGAGAAAAGTGAAATGTCTTTGCTATCCGGAGACGAAGGGCCCTCGTCTTCCACATTATTTTTTA
TCAACTAGGAGGAACTACTC

Downstream 100 bases:

>100_bases
GGAGGAACTTATGTTCAACAATCATAAAAGCTACAACTGGATGTATCGGGAGGGCGAGCTCACGCTCGGCCTCCACATCC
CTTTAGAAAACTTCAAAATG

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MNQPYSQPVEEQAPKNGGLALLALAISAFGIGTTEFVPVGLLASIANDLNIGITLAGLIISGYAIGVAVGAPILTALTNR
MNRKTLLMALMVVFIGGNLVSAMSTSFELLIVARFITAFSHGVFFSIGATIAVQLVPPHKKASAIALMFTGLTVATVTGV
PLGTFIGQAFGWRATFFAVAALGVVSIIASFFLIPKDLKQSPPAKFSDMKKLLTNGRLMLGFLITALGYGGTFVAFTYLT
PIMQDVTKISPSLISVVLLVYGIAVAIGNAVGGKLANENPAKALFYMFIVHAAVMIIMSFMIPFKVAGLIAIVLMGLLAF
MNVPGLQLYIVQLAEKYVPAAVDVASALNIAAFNIGIALGATIGGLVADSIGLVHTPWVGGIMVIIAVILTAISRRMEAK

Sequences:

>Translated_400_residues
MNQPYSQPVEEQAPKNGGLALLALAISAFGIGTTEFVPVGLLASIANDLNIGITLAGLIISGYAIGVAVGAPILTALTNR
MNRKTLLMALMVVFIGGNLVSAMSTSFELLIVARFITAFSHGVFFSIGATIAVQLVPPHKKASAIALMFTGLTVATVTGV
PLGTFIGQAFGWRATFFAVAALGVVSIIASFFLIPKDLKQSPPAKFSDMKKLLTNGRLMLGFLITALGYGGTFVAFTYLT
PIMQDVTKISPSLISVVLLVYGIAVAIGNAVGGKLANENPAKALFYMFIVHAAVMIIMSFMIPFKVAGLIAIVLMGLLAF
MNVPGLQLYIVQLAEKYVPAAVDVASALNIAAFNIGIALGATIGGLVADSIGLVHTPWVGGIMVIIAVILTAISRRMEAK
>Mature_400_residues
MNQPYSQPVEEQAPKNGGLALLALAISAFGIGTTEFVPVGLLASIANDLNIGITLAGLIISGYAIGVAVGAPILTALTNR
MNRKTLLMALMVVFIGGNLVSAMSTSFELLIVARFITAFSHGVFFSIGATIAVQLVPPHKKASAIALMFTGLTVATVTGV
PLGTFIGQAFGWRATFFAVAALGVVSIIASFFLIPKDLKQSPPAKFSDMKKLLTNGRLMLGFLITALGYGGTFVAFTYLT
PIMQDVTKISPSLISVVLLVYGIAVAIGNAVGGKLANENPAKALFYMFIVHAAVMIIMSFMIPFKVAGLIAIVLMGLLAF
MNVPGLQLYIVQLAEKYVPAAVDVASALNIAAFNIGIALGATIGGLVADSIGLVHTPWVGGIMVIIAVILTAISRRMEAK

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=381, Percent_Identity=38.3202099737533, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI1786595, Length=360, Percent_Identity=31.1111111111111, Blast_Score=167, Evalue=9e-43,
Organism=Escherichia coli, GI1787808, Length=384, Percent_Identity=30.7291666666667, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI145693198, Length=368, Percent_Identity=26.0869565217391, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41704; Mature: 41704

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPYSQPVEEQAPKNGGLALLALAISAFGIGTTEFVPVGLLASIANDLNIGITLAGLII
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
SGYAIGVAVGAPILTALTNRMNRKTLLMALMVVFIGGNLVSAMSTSFELLIVARFITAFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
HGVFFSIGATIAVQLVPPHKKASAIALMFTGLTVATVTGVPLGTFIGQAFGWRATFFAVA
CCHHEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ALGVVSIIASFFLIPKDLKQSPPAKFSDMKKLLTNGRLMLGFLITALGYGGTFVAFTYLT
HHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH
PIMQDVTKISPSLISVVLLVYGIAVAIGNAVGGKLANENPAKALFYMFIVHAAVMIIMSF
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MIPFKVAGLIAIVLMGLLAFMNVPGLQLYIVQLAEKYVPAAVDVASALNIAAFNIGIALG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ATIGGLVADSIGLVHTPWVGGIMVIIAVILTAISRRMEAK
HHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQPYSQPVEEQAPKNGGLALLALAISAFGIGTTEFVPVGLLASIANDLNIGITLAGLII
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
SGYAIGVAVGAPILTALTNRMNRKTLLMALMVVFIGGNLVSAMSTSFELLIVARFITAFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
HGVFFSIGATIAVQLVPPHKKASAIALMFTGLTVATVTGVPLGTFIGQAFGWRATFFAVA
CCHHEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ALGVVSIIASFFLIPKDLKQSPPAKFSDMKKLLTNGRLMLGFLITALGYGGTFVAFTYLT
HHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH
PIMQDVTKISPSLISVVLLVYGIAVAIGNAVGGKLANENPAKALFYMFIVHAAVMIIMSF
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MIPFKVAGLIAIVLMGLLAFMNVPGLQLYIVQLAEKYVPAAVDVASALNIAAFNIGIALG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ATIGGLVADSIGLVHTPWVGGIMVIIAVILTAISRRMEAK
HHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]