| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yvdM [H]
Identifier: 229916676
GI number: 229916676
Start: 896500
End: 897165
Strand: Reverse
Name: yvdM [H]
Synonym: EAT1b_0948
Alternate gene names: 229916676
Gene position: 897165-896500 (Counterclockwise)
Preceding gene: 229916677
Following gene: 229916675
Centisome position: 29.91
GC content: 50.3
Gene sequence:
>666_bases ATGTCAACGATTGAAGCAGTGATTTTCGATTTGGACGGTGTCATCACTGACACGGCAGAGTACCATTACCTCGCTTGGAA GCAGCTCGGTGAAGAGCTCGGAATTCCATTTGACCGCGAATTCAACGAAACGCTCAAAGGCGTGAGTCGGACTGAGTCGC TTGAGCGGATCCTTACGCTCGGCGGTAAACAGAACGATTTCACACCGGAAGAGAAAGAAGAACTCGCACAAAAGAAAAAC GAGCACTACGTTGAACTCATTCAACATATCTCATCCGACGATCTTCTTCCTGGTATCGTTTCATTCCTCGATGAAATCAA AGAGGCGGGACTCAAAATCGGAATGGCTTCTGCATCAAAGAACGCATTTGCGGTCGTTGATGCACTTGGTGTCCGCCATT ACTTCGACCATATTGTCGATGCAGCAACTGTCGCCCAGTCAAAACCACACCCCGAAGTGTTTTTGAAGGCCGCTTCTGCC CTTGGCGTGAAACCCGAACTCGCCATCGGCGTTGAAGACGCGGCTGCCGGCGTAACTGCAATCAAAGCGGCAAATATGTT TGCTGTCGCCGTCGGAGAAGAATCGATGCTTGGTCATGCAGACCTCATCGTCGCTTCTACTGACGAACTTTCGCTTGAAC GCATCCTCGAACGCGTTCACGTGTAA
Upstream 100 bases:
>100_bases AACCGTTTGCATCATTGACCAAACGTGCGACGGGTACTTGTCAAGTTCCCTAAATGTAGTCTGACGACACAAGCATTTGA AGGAAAGGCGGAAAGCATGT
Downstream 100 bases:
>100_bases ATGACTACAATCATCTTCCGTGAGACGGCGACTGCCCCGAACAGTCGTCGTCTTTTTTGAGTCAAAAGTCCTAAATAGAC AGAATTGCCCAAAAAGAGAT
Product: beta-phosphoglucomutase
Products: NA
Alternate protein names: Beta-PGM [H]
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSTIEAVIFDLDGVITDTAEYHYLAWKQLGEELGIPFDREFNETLKGVSRTESLERILTLGGKQNDFTPEEKEELAQKKN EHYVELIQHISSDDLLPGIVSFLDEIKEAGLKIGMASASKNAFAVVDALGVRHYFDHIVDAATVAQSKPHPEVFLKAASA LGVKPELAIGVEDAAAGVTAIKAANMFAVAVGEESMLGHADLIVASTDELSLERILERVHV
Sequences:
>Translated_221_residues MSTIEAVIFDLDGVITDTAEYHYLAWKQLGEELGIPFDREFNETLKGVSRTESLERILTLGGKQNDFTPEEKEELAQKKN EHYVELIQHISSDDLLPGIVSFLDEIKEAGLKIGMASASKNAFAVVDALGVRHYFDHIVDAATVAQSKPHPEVFLKAASA LGVKPELAIGVEDAAAGVTAIKAANMFAVAVGEESMLGHADLIVASTDELSLERILERVHV >Mature_220_residues STIEAVIFDLDGVITDTAEYHYLAWKQLGEELGIPFDREFNETLKGVSRTESLERILTLGGKQNDFTPEEKEELAQKKNE HYVELIQHISSDDLLPGIVSFLDEIKEAGLKIGMASASKNAFAVVDALGVRHYFDHIVDAATVAQSKPHPEVFLKAASAL GVKPELAIGVEDAAAGVTAIKAANMFAVAVGEESMLGHADLIVASTDELSLERILERVHV
Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1787576, Length=212, Percent_Identity=45.7547169811321, Blast_Score=201, Evalue=4e-53, Organism=Escherichia coli, GI1789046, Length=185, Percent_Identity=33.5135135135135, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1788021, Length=198, Percent_Identity=30.8080808080808, Blast_Score=83, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR010972 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =5.4.2.6 [H]
Molecular weight: Translated: 24012; Mature: 23881
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIEAVIFDLDGVITDTAEYHYLAWKQLGEELGIPFDREFNETLKGVSRTESLERILTL CCCHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH GGKQNDFTPEEKEELAQKKNEHYVELIQHISSDDLLPGIVSFLDEIKEAGLKIGMASASK CCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC NAFAVVDALGVRHYFDHIVDAATVAQSKPHPEVFLKAASALGVKPELAIGVEDAAAGVTA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCHHHHHHHHH IKAANMFAVAVGEESMLGHADLIVASTDELSLERILERVHV HHHCCEEEEEECCHHHCCCCEEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure STIEAVIFDLDGVITDTAEYHYLAWKQLGEELGIPFDREFNETLKGVSRTESLERILTL CCHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH GGKQNDFTPEEKEELAQKKNEHYVELIQHISSDDLLPGIVSFLDEIKEAGLKIGMASASK CCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC NAFAVVDALGVRHYFDHIVDAATVAQSKPHPEVFLKAASALGVKPELAIGVEDAAAGVTA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEECCHHHHHHHHH IKAANMFAVAVGEESMLGHADLIVASTDELSLERILERVHV HHHCCEEEEEECCHHHCCCCEEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]