Click here to switch to the map view.

The map label for this gene is yvyF [H]

Identifier: 229916663

GI number: 229916663

Start: 883532

End: 883918

Strand: Reverse

Name: yvyF [H]

Synonym: EAT1b_0935

Alternate gene names: 229916663

Gene position: 883918-883532 (Counterclockwise)

Preceding gene: 229916664

Following gene: 229916662

Centisome position: 29.46

GC content: 48.84

Gene sequence:

>387_bases
ATGGATGCAGCAACTTGCCAAATGTGTGGACGCTTGTTTATGAAACAGGGACGTTCACCGTACTGTCCATCATGTAGTGA
TGTCGACTTCCAAAACTTTTTGAAAGTCCGCGACTTCATTCGTGAGCCGGCCAACAAACAGACGACCATCGGAGCCCTCG
TCGAAGCGACAGGTGTCTCTGAACTTGATATCACGCGATATATCCATGAAGGACGCTTGATCATCAAGGACAATCCGGCG
CTTGCCATCAGCTGCGTCCGTTGTGGTCAACCGACGAACGAAGGGAAAATTTGTTCGAACTGCCAGAGAGATATGCAGAA
GGAACTGTCCAGTCTACAGGAGAGCTTGACGAAACAATCAAGCATCCGCGCTTATCGTTTGGATTAA

Upstream 100 bases:

>100_bases
GTTGCGACAGGCAGGTGCATCAGAAGTTTCTGCGATTTGCTTATTTCGGGCGCTAAACAAATCGAAATCGCGTCCGATAT
AAAGAGCAGAGGTGAAACCA

Downstream 100 bases:

>100_bases
CATCATGAAGAGGGGGAAGACGCATGCGCATCGATTCAGCCAAGTGGGTACACTTACCGAACACTTATGAAAAGAAAACG
CAAGTCGAGCCGAAGCCCGC

Product: flagellar protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MDAATCQMCGRLFMKQGRSPYCPSCSDVDFQNFLKVRDFIREPANKQTTIGALVEATGVSELDITRYIHEGRLIIKDNPA
LAISCVRCGQPTNEGKICSNCQRDMQKELSSLQESLTKQSSIRAYRLD

Sequences:

>Translated_128_residues
MDAATCQMCGRLFMKQGRSPYCPSCSDVDFQNFLKVRDFIREPANKQTTIGALVEATGVSELDITRYIHEGRLIIKDNPA
LAISCVRCGQPTNEGKICSNCQRDMQKELSSLQESLTKQSSIRAYRLD
>Mature_128_residues
MDAATCQMCGRLFMKQGRSPYCPSCSDVDFQNFLKVRDFIREPANKQTTIGALVEATGVSELDITRYIHEGRLIIKDNPA
LAISCVRCGQPTNEGKICSNCQRDMQKELSSLQESLTKQSSIRAYRLD

Specific function: May be involved in the assembly, structure, or function of the flagellum. May polymerize to form a filamentous structure that is part of the flagellum [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium fliF [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022258 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14356; Mature: 14356

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAATCQMCGRLFMKQGRSPYCPSCSDVDFQNFLKVRDFIREPANKQTTIGALVEATGVS
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
ELDITRYIHEGRLIIKDNPALAISCVRCGQPTNEGKICSNCQRDMQKELSSLQESLTKQS
HHHHHHHHHCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SIRAYRLD
CCEEEECC
>Mature Secondary Structure
MDAATCQMCGRLFMKQGRSPYCPSCSDVDFQNFLKVRDFIREPANKQTTIGALVEATGVS
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
ELDITRYIHEGRLIIKDNPALAISCVRCGQPTNEGKICSNCQRDMQKELSSLQESLTKQS
HHHHHHHHHCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SIRAYRLD
CCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8045879; 9384377 [H]