| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yjlA [H]
Identifier: 229916650
GI number: 229916650
Start: 873733
End: 874668
Strand: Reverse
Name: yjlA [H]
Synonym: EAT1b_0922
Alternate gene names: 229916650
Gene position: 874668-873733 (Counterclockwise)
Preceding gene: 229916651
Following gene: 229916648
Centisome position: 29.16
GC content: 55.98
Gene sequence:
>936_bases ATGCGTCCACTCATACTCGGTATCTTCGCCGCCTTGTTTTTTGCGAGCACGTTCGTGTTGAACGAAGTGATGCAAGTCGG AGATGGCAACTTTGCCTATAGTGCCTCGCTTCGCTTTTTGTGGATGATCCCATTGCTGCTAGTTGTGGTGGCATTTCGTG GCGGACTCAAGCGAGTCCTCTCGGTATTGAAGAAGAATCCTAGTCCATGGATTCTTTGGGGGACGGTCGGATTCGGACTG TTTTACGTCCCGATTTGTCTCGCAGCCGAGGTCGCACCCCCGTGGCTGATTGCGGGCACGTGGCAAGTGACGATTGTCGC CGGGGCACTGTTGTCCCCACTCTTCAAGAAGGCAGACGGAACACGGGAGCGAATCCCATGGCGCGGACTTCGCTTCTCGG TCTTGATTCTCATTGGGGTCGTAATGATGCAAGTGGAGTTTTTCGAGTCTTTCGAACCTCGGTTCATTTGGCTTGGGGTC GTGCTGGTCATCATCGCCGCATTTGCCTACCCGCTCGGAAACCGGAAGATGATGCAGCACACGGACCTCGACGTATTCGA GCGAATCCTCGGGATGTGTCTCGGGTCGCTCCCGGTCTGGTTATTGTTATTCGGGTACGGATTGACGACGGGACGTCCCT CATCGAGTCAGCTCGGGCAGACGTTCCTCGTCGCCCTGTTATCCGGGATTGTCGCGACCGTGCTCTTCTTCATGGCGACC GATCTCGTCAAACAGGATATGGGAAGACTGGCGTCCGTTGAAGCGACGCAAGCGCTCGAAGTCCTGTTCGCGCTCATCGG GGAACTGGTCTTCCTGCATGCCGTCATGCCGTCGCCAATCGCCTTGTCCGGAATCGCGCTCGTCATGATTGGAGTCGTCT TCCACAGTCGGAGTCAGTTTATGGAGCTCCCGACCGTCGTTCGACAAGAGGCATAA
Upstream 100 bases:
>100_bases GAGTGGGAATAACGAAACGGATGGCGAAGCGCTGTCCGTTTTTTGCAGGAGAAGTGGCAAGGTGTCGAGAACATGACAGG ATTCAGAAAGGAGGGATCGG
Downstream 100 bases:
>100_bases AAAATCCCCTCGCTCTTATGGACGAGGGGATTGTCATCAACTTGTTGTCAAACTGCCTTTGACTTTGTCATAGAAATCAT CCATCATACCGGTACGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRPLILGIFAALFFASTFVLNEVMQVGDGNFAYSASLRFLWMIPLLLVVVAFRGGLKRVLSVLKKNPSPWILWGTVGFGL FYVPICLAAEVAPPWLIAGTWQVTIVAGALLSPLFKKADGTRERIPWRGLRFSVLILIGVVMMQVEFFESFEPRFIWLGV VLVIIAAFAYPLGNRKMMQHTDLDVFERILGMCLGSLPVWLLLFGYGLTTGRPSSSQLGQTFLVALLSGIVATVLFFMAT DLVKQDMGRLASVEATQALEVLFALIGELVFLHAVMPSPIALSGIALVMIGVVFHSRSQFMELPTVVRQEA
Sequences:
>Translated_311_residues MRPLILGIFAALFFASTFVLNEVMQVGDGNFAYSASLRFLWMIPLLLVVVAFRGGLKRVLSVLKKNPSPWILWGTVGFGL FYVPICLAAEVAPPWLIAGTWQVTIVAGALLSPLFKKADGTRERIPWRGLRFSVLILIGVVMMQVEFFESFEPRFIWLGV VLVIIAAFAYPLGNRKMMQHTDLDVFERILGMCLGSLPVWLLLFGYGLTTGRPSSSQLGQTFLVALLSGIVATVLFFMAT DLVKQDMGRLASVEATQALEVLFALIGELVFLHAVMPSPIALSGIALVMIGVVFHSRSQFMELPTVVRQEA >Mature_311_residues MRPLILGIFAALFFASTFVLNEVMQVGDGNFAYSASLRFLWMIPLLLVVVAFRGGLKRVLSVLKKNPSPWILWGTVGFGL FYVPICLAAEVAPPWLIAGTWQVTIVAGALLSPLFKKADGTRERIPWRGLRFSVLILIGVVMMQVEFFESFEPRFIWLGV VLVIIAAFAYPLGNRKMMQHTDLDVFERILGMCLGSLPVWLLLFGYGLTTGRPSSSQLGQTFLVALLSGIVATVLFFMAT DLVKQDMGRLASVEATQALEVLFALIGELVFLHAVMPSPIALSGIALVMIGVVFHSRSQFMELPTVVRQEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34271; Mature: 34271
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLILGIFAALFFASTFVLNEVMQVGDGNFAYSASLRFLWMIPLLLVVVAFRGGLKRVL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHH SVLKKNPSPWILWGTVGFGLFYVPICLAAEVAPPWLIAGTWQVTIVAGALLSPLFKKADG HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCC TRERIPWRGLRFSVLILIGVVMMQVEFFESFEPRFIWLGVVLVIIAAFAYPLGNRKMMQH CHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH TDLDVFERILGMCLGSLPVWLLLFGYGLTTGRPSSSQLGQTFLVALLSGIVATVLFFMAT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DLVKQDMGRLASVEATQALEVLFALIGELVFLHAVMPSPIALSGIALVMIGVVFHSRSQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MELPTVVRQEA HHHHHHHHCCC >Mature Secondary Structure MRPLILGIFAALFFASTFVLNEVMQVGDGNFAYSASLRFLWMIPLLLVVVAFRGGLKRVL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHH SVLKKNPSPWILWGTVGFGLFYVPICLAAEVAPPWLIAGTWQVTIVAGALLSPLFKKADG HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCC TRERIPWRGLRFSVLILIGVVMMQVEFFESFEPRFIWLGVVLVIIAAFAYPLGNRKMMQH CHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH TDLDVFERILGMCLGSLPVWLLLFGYGLTTGRPSSSQLGQTFLVALLSGIVATVLFFMAT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DLVKQDMGRLASVEATQALEVLFALIGELVFLHAVMPSPIALSGIALVMIGVVFHSRSQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MELPTVVRQEA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]