| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yaaR [H]
Identifier: 229916632
GI number: 229916632
Start: 859244
End: 859687
Strand: Direct
Name: yaaR [H]
Synonym: EAT1b_0904
Alternate gene names: 229916632
Gene position: 859244-859687 (Clockwise)
Preceding gene: 229916631
Following gene: 229916633
Centisome position: 28.64
GC content: 54.95
Gene sequence:
>444_bases ATGGACATTCGTCGCATCATGGAGACGCAATCGCTCCTCGGCTCAAGCAAGGCGAAACGCCCCGAAGTCGAACCCGGCGT CTCCTTCCAAAACGTGATCGGTCAAAAACGCGAAGATCGGGAATACGAACGCTTCCAGCGTCAAATCGCCGCGATTCATG AACAAGGAGAACTGCTCGCCGAGAGTCAGACCGTCGAGGCGCTCGCCGACTACAAACAAATGATTAAAGACTTTATGAAA GAGGCCGTTGACGCGGCACTCCGTCTTGAGGACAAACGTGGATTCAATCGCCGCGGCCGCGCGAAGATTTATAAGGTCGT CGAACAAGTCGACCAAAAACTCCTCGCGCTGACGGATCAGGTCATCTCAGGTGAGGCCTCTCGCCTCTCCTTACTCGACC AGGTCGGTGAGATTCGCGGACTGCTCGTCAACGTCTATGTGTGA
Upstream 100 bases:
>100_bases CTTGAATCAGTCCGGCATGGCGATGATTGCCCAGTCGAACGCATTGCCGCAAGGCGTGTTACAATTATTGAACTAACCTA AAGAAAGGACGGTTGCCCAT
Downstream 100 bases:
>100_bases GGTGTCGAGATGGCAGAACATTTATTTTTGAAGAAAGTCAAATGTCCGTATTGTTTACAGGAAAGTAAGACGAACCGTGT CTTATCACGTCACATCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MDIRRIMETQSLLGSSKAKRPEVEPGVSFQNVIGQKREDREYERFQRQIAAIHEQGELLAESQTVEALADYKQMIKDFMK EAVDAALRLEDKRGFNRRGRAKIYKVVEQVDQKLLALTDQVISGEASRLSLLDQVGEIRGLLVNVYV
Sequences:
>Translated_147_residues MDIRRIMETQSLLGSSKAKRPEVEPGVSFQNVIGQKREDREYERFQRQIAAIHEQGELLAESQTVEALADYKQMIKDFMK EAVDAALRLEDKRGFNRRGRAKIYKVVEQVDQKLLALTDQVISGEASRLSLLDQVGEIRGLLVNVYV >Mature_147_residues MDIRRIMETQSLLGSSKAKRPEVEPGVSFQNVIGQKREDREYERFQRQIAAIHEQGELLAESQTVEALADYKQMIKDFMK EAVDAALRLEDKRGFNRRGRAKIYKVVEQVDQKLLALTDQVISGEASRLSLLDQVGEIRGLLVNVYV
Specific function: Unknown
COG id: COG1728
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005585 [H]
Pfam domain/function: PF03885 DUF327 [H]
EC number: NA
Molecular weight: Translated: 16808; Mature: 16808
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIRRIMETQSLLGSSKAKRPEVEPGVSFQNVIGQKREDREYERFQRQIAAIHEQGELLA CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ESQTVEALADYKQMIKDFMKEAVDAALRLEDKRGFNRRGRAKIYKVVEQVDQKLLALTDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VISGEASRLSLLDQVGEIRGLLVNVYV HHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDIRRIMETQSLLGSSKAKRPEVEPGVSFQNVIGQKREDREYERFQRQIAAIHEQGELLA CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ESQTVEALADYKQMIKDFMKEAVDAALRLEDKRGFNRRGRAKIYKVVEQVDQKLLALTDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VISGEASRLSLLDQVGEIRGLLVNVYV HHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]