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The map label for this gene is yebA [C]

Identifier: 229916618

GI number: 229916618

Start: 845439

End: 846764

Strand: Reverse

Name: yebA [C]

Synonym: EAT1b_0890

Alternate gene names: 229916618

Gene position: 846764-845439 (Counterclockwise)

Preceding gene: 229916619

Following gene: 229916617

Centisome position: 28.23

GC content: 55.43

Gene sequence:

>1326_bases
ATGAAACGTTCGCTTGCGCTAGGGTTGTGTGTATCGTTACTTGCCATGCCGGTCATGGCGACAGAGAAAGACACGTTGAA
AGCTCGACAAGATCGACTGTCCAATGAGTTGGAGGAGTCGAAAAAAGCGCAGGCCGAGACGGATGCCGAACTCGAGATCA
CCGAGGCAGAGCGTGATGCCGTGAAGACGGAAATACACGTCGTCGACGACAGGTTGAATGAATTGAGCGAACAGATCGCC
ATTCAGCAACATGAGGTCGATACAGCCCGGGCAGAACTCGAGTCGACCCGCCAACAACTTTCTGTTCAGGAAGAATACTT
GGAAAGCCAGAAGGAACTCGTGAACGAGCGCCTTCGCGTCTTGCAAGTACATGAAGATACTTCCTATCTACAAGTCATCT
TTGAGTCCCGTTCCTTCGGCGACTTCGTGACACGGGCCATGACGGCCCGCACGATCGCTGAACAGGATCGGGAACTCATA
CATAATTATATGAGTGAGATGGAACGCTTGGAGTCGCTCGAGTCGACACAACGCACCCAGCTCTCTTTCATCAAGCAAAA
AGAGCGCGAGCTCGTGATCACGAAGCAAGACCTTGACCGAACGGCCGAGAAGAAACGTGACCTGTTGGTCGAACTGAACG
AGCAAGTGGAGCAACTCGAGCTCGAAAAGATGACGCGCAGTGAAGAACAGGCGGTCATGGCTGAACAGAACCGCATCATC
AATGAACAACTCGAGGCGATCGCGACTGCCGAACGAGAAGCCGCAGAGGCAGCCGAACGTGCCAAGCGTGAAGCCGAGGC
GCGTGCCGCGGAAGAGCGAGCACAAGCAGAAGCGGAAGCCCGTGAGTCGGAGGTTGAGGAGGCACCAGAAGTGACCGCAC
CAACCGAAACACCGACGAATGTGTCCACGTCCACCGGATTCGTTCGTCCCGTATCCGGTTATGTGTCTAGTCCGTTCGGT
CCACGAGACAACCCGTTGACGGGTGTCCCGGAGATTCACAAGGGCATCGACCTCGTCAATGCATCTGGGACACCAATCGT
GTCAAGCGCGCCAGGTGTCGTCATCAAAGCGGCGCCGGCGACGGGATACGGAAATGTCGTCTTCGTTTCGCATGTCATCA
ACGGTGAGATTTGGACGACCGTCTATGCCCATTTGAATGCGATCACGGCCGGAGCCGGTCAACAAGTGGCGGCGGGACAG
ACGATCGGAACGCTCGGCAATACCGGCTGGTCGACCGGTCCCCATCTTCATTTTGAGTTACATCGAGGAAAATGGGCACC
GGGACAGCCGAACGCGATTGACCCAGCCCCGTATATTGGATACTGA

Upstream 100 bases:

>100_bases
TGTTTTACTTGCACTCGGTGCGTTCATCGGAATCTGGGGATCGACGACATCGCTCGGTCGCTTCTTGAAAATCTAACTTA
AATTAAGGAGGAGTTGGCGG

Downstream 100 bases:

>100_bases
CAGAAGCGGACGCGTCCCAAATATGTGGAACGCGTCCGCTTTTCCTCTAGTTTTTGCTATACTAATGAAAAGACTTACAA
AGAGAAATGAGGGACCAACC

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MKRSLALGLCVSLLAMPVMATEKDTLKARQDRLSNELEESKKAQAETDAELEITEAERDAVKTEIHVVDDRLNELSEQIA
IQQHEVDTARAELESTRQQLSVQEEYLESQKELVNERLRVLQVHEDTSYLQVIFESRSFGDFVTRAMTARTIAEQDRELI
HNYMSEMERLESLESTQRTQLSFIKQKERELVITKQDLDRTAEKKRDLLVELNEQVEQLELEKMTRSEEQAVMAEQNRII
NEQLEAIATAEREAAEAAERAKREAEARAAEERAQAEAEARESEVEEAPEVTAPTETPTNVSTSTGFVRPVSGYVSSPFG
PRDNPLTGVPEIHKGIDLVNASGTPIVSSAPGVVIKAAPATGYGNVVFVSHVINGEIWTTVYAHLNAITAGAGQQVAAGQ
TIGTLGNTGWSTGPHLHFELHRGKWAPGQPNAIDPAPYIGY

Sequences:

>Translated_441_residues
MKRSLALGLCVSLLAMPVMATEKDTLKARQDRLSNELEESKKAQAETDAELEITEAERDAVKTEIHVVDDRLNELSEQIA
IQQHEVDTARAELESTRQQLSVQEEYLESQKELVNERLRVLQVHEDTSYLQVIFESRSFGDFVTRAMTARTIAEQDRELI
HNYMSEMERLESLESTQRTQLSFIKQKERELVITKQDLDRTAEKKRDLLVELNEQVEQLELEKMTRSEEQAVMAEQNRII
NEQLEAIATAEREAAEAAERAKREAEARAAEERAQAEAEARESEVEEAPEVTAPTETPTNVSTSTGFVRPVSGYVSSPFG
PRDNPLTGVPEIHKGIDLVNASGTPIVSSAPGVVIKAAPATGYGNVVFVSHVINGEIWTTVYAHLNAITAGAGQQVAAGQ
TIGTLGNTGWSTGPHLHFELHRGKWAPGQPNAIDPAPYIGY
>Mature_441_residues
MKRSLALGLCVSLLAMPVMATEKDTLKARQDRLSNELEESKKAQAETDAELEITEAERDAVKTEIHVVDDRLNELSEQIA
IQQHEVDTARAELESTRQQLSVQEEYLESQKELVNERLRVLQVHEDTSYLQVIFESRSFGDFVTRAMTARTIAEQDRELI
HNYMSEMERLESLESTQRTQLSFIKQKERELVITKQDLDRTAEKKRDLLVELNEQVEQLELEKMTRSEEQAVMAEQNRII
NEQLEAIATAEREAAEAAERAKREAEARAAEERAQAEAEARESEVEEAPEVTAPTETPTNVSTSTGFVRPVSGYVSSPFG
PRDNPLTGVPEIHKGIDLVNASGTPIVSSAPGVVIKAAPATGYGNVVFVSHVINGEIWTTVYAHLNAITAGAGQQVAAGQ
TIGTLGNTGWSTGPHLHFELHRGKWAPGQPNAIDPAPYIGY

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=107, Percent_Identity=42.9906542056075, Blast_Score=86, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 48906; Mature: 48906

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLALGLCVSLLAMPVMATEKDTLKARQDRLSNELEESKKAQAETDAELEITEAERDA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH
VKTEIHVVDDRLNELSEQIAIQQHEVDTARAELESTRQQLSVQEEYLESQKELVNERLRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQVHEDTSYLQVIFESRSFGDFVTRAMTARTIAEQDRELIHNYMSEMERLESLESTQRTQ
HHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFIKQKERELVITKQDLDRTAEKKRDLLVELNEQVEQLELEKMTRSEEQAVMAEQNRII
HHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEQLEAIATAEREAAEAAERAKREAEARAAEERAQAEAEARESEVEEAPEVTAPTETPTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VSTSTGFVRPVSGYVSSPFGPRDNPLTGVPEIHKGIDLVNASGTPIVSSAPGVVIKAAPA
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCCCEEEEECCC
TGYGNVVFVSHVINGEIWTTVYAHLNAITAGAGQQVAAGQTIGTLGNTGWSTGPHLHFEL
CCCCCEEEEEEHHCCHHHHHHHHHHHHHHCCCCCCHHCCCHHHCCCCCCCCCCCEEEEEE
HRGKWAPGQPNAIDPAPYIGY
ECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRSLALGLCVSLLAMPVMATEKDTLKARQDRLSNELEESKKAQAETDAELEITEAERDA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH
VKTEIHVVDDRLNELSEQIAIQQHEVDTARAELESTRQQLSVQEEYLESQKELVNERLRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQVHEDTSYLQVIFESRSFGDFVTRAMTARTIAEQDRELIHNYMSEMERLESLESTQRTQ
HHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFIKQKERELVITKQDLDRTAEKKRDLLVELNEQVEQLELEKMTRSEEQAVMAEQNRII
HHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEQLEAIATAEREAAEAAERAKREAEARAAEERAQAEAEARESEVEEAPEVTAPTETPTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VSTSTGFVRPVSGYVSSPFGPRDNPLTGVPEIHKGIDLVNASGTPIVSSAPGVVIKAAPA
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCCCEEEEECCC
TGYGNVVFVSHVINGEIWTTVYAHLNAITAGAGQQVAAGQTIGTLGNTGWSTGPHLHFEL
CCCCCEEEEEEHHCCHHHHHHHHHHHHHHCCCCCCHHCCCHHHCCCCCCCCCCCEEEEEE
HRGKWAPGQPNAIDPAPYIGY
ECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]