| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ctpB [H]
Identifier: 229916617
GI number: 229916617
Start: 843934
End: 845337
Strand: Reverse
Name: ctpB [H]
Synonym: EAT1b_0889
Alternate gene names: 229916617
Gene position: 845337-843934 (Counterclockwise)
Preceding gene: 229916618
Following gene: 229916616
Centisome position: 28.18
GC content: 53.06
Gene sequence:
>1404_bases GTGAAAAATTCAACCGCAGGACTACTCGCTGGCACAACGTTCGTGGCTGGGGCCGGTGCAGGCCTTGCGACGATGGCGTT TACAGACACATCGCTTCCCATTCAAACGAATGCGGAAGGCTGGGATAAAGTCGACCAAGTACGTGATTTGATTGAAGAAC ATTCATTACAGGACATCTCAGAAGACGATTTATTGACCGGCGCACTCGACGGGATGACCGCAGCGCTGAACGACCCGTAT TCGGATTTCTTGGATGCGGAAGAAACGTCACAATTTACGGACTCGATTGAATCGAGTTTTGAAGGAATCGGCGCGACTTT GGAGAAGAAAGGAGAGGACATCTTAATTGTCGCTCCGATCAAAGGCGCTCCGGCCGAAGAGGCGGGACTTCGTCCTGGCG ACATCATCACAGCGGTCGACGGAGAATCGATCGAAGGGATGGATGTACAGGAAGCCGTCCAATTGATTCGAGGTGAAAAA GGGACGACCGTCACGTTGACGATTCGCCGTGGCAGTCAGACGGCGGACTATGAGATCACTCGTGACACGATTCCGATCGA GACGGTCTTCTCTGAAGTGAAAGAGAAAGATGGCAAAAAGATCGGGTATCTCCAAGTCACCCAGTTCTCAGAACCGACGG CTGATGAATTCCTCGAACAACTCGAGCAACTCGAGTCAGAAGAGATCGATAGCTTGATCATCGATGTTCGTGGAAATCCG GGAGGTCTCTTGCCAGCCGTCATCGAAATGTCAGAAGGATTCGTCCCGACCTCAAAACCGGTCGTTCAAATCGAGAATGC GGACGGGGACCGTGATGCACAAAACGGCCGCGCCCGTGAAGCGAAACCGTATGACCTGTTCGTCTTGACGGATGAAGGTT CTGCCTCGGCATCTGAGATTTTGACTGGTGCGATGAAAGAAGGGGCAGGCGCGACCATCATCGGGACGAAGACGTTCGGA AAAGGTGTCGTCCAGACGGCGTTCGACCTAGAGGACGGCAGTAACTTGAAGTTGACGACGAGCAAATGGCTCACGCCGGA CGGGAACTGGATCAACAAGAAGGGCATCGAGCCGGACATTGAAGTGGAGCAACCGGATTACTTCAACGTGACCCGTGTGC TGACAGAAGAAGAGTCGCTCCAAGTCGGAGATTACGGCGATGCCGTCTCGAACTTGCATAAAATTTTAACTGGGATCGGC TATGAGCCAGGCGGTCAGCCGGGATATTACGGGGACACGATGGCGAACGCCGTGAAAGCATTCCAGACAGACAATGGTCT CGAGGCTTCCGGAACGGTCGATGAAGAGACAGCCTCTGCACTCGAAGCGAAGTTGCTCGAAGCGATTCAAGATGAGGCGA ATGACGCCCAGTTGAATCGAGCGCTTGAAGAAGCCGCAAAATAA
Upstream 100 bases:
>100_bases AGAAGCGGACGCGTCCCAAATATGTGGAACGCGTCCGCTTTTCCTCTAGTTTTTGCTATACTAATGAAAAGACTTACAAA GAGAAATGAGGGACCAACCC
Downstream 100 bases:
>100_bases CGTTGTATGAAAGAAAGGGTTGGACCGCGTGGAAGTTGTACGAATGAGTGTTACGGCTTTATTGACGTTGTTAGGTAGTC CGCTGTTTTGGGTGACACTC
Product: carboxyl-terminal protease
Products: NA
Alternate protein names: C-terminal processing protease [H]
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MKNSTAGLLAGTTFVAGAGAGLATMAFTDTSLPIQTNAEGWDKVDQVRDLIEEHSLQDISEDDLLTGALDGMTAALNDPY SDFLDAEETSQFTDSIESSFEGIGATLEKKGEDILIVAPIKGAPAEEAGLRPGDIITAVDGESIEGMDVQEAVQLIRGEK GTTVTLTIRRGSQTADYEITRDTIPIETVFSEVKEKDGKKIGYLQVTQFSEPTADEFLEQLEQLESEEIDSLIIDVRGNP GGLLPAVIEMSEGFVPTSKPVVQIENADGDRDAQNGRAREAKPYDLFVLTDEGSASASEILTGAMKEGAGATIIGTKTFG KGVVQTAFDLEDGSNLKLTTSKWLTPDGNWINKKGIEPDIEVEQPDYFNVTRVLTEEESLQVGDYGDAVSNLHKILTGIG YEPGGQPGYYGDTMANAVKAFQTDNGLEASGTVDEETASALEAKLLEAIQDEANDAQLNRALEEAAK
Sequences:
>Translated_467_residues MKNSTAGLLAGTTFVAGAGAGLATMAFTDTSLPIQTNAEGWDKVDQVRDLIEEHSLQDISEDDLLTGALDGMTAALNDPY SDFLDAEETSQFTDSIESSFEGIGATLEKKGEDILIVAPIKGAPAEEAGLRPGDIITAVDGESIEGMDVQEAVQLIRGEK GTTVTLTIRRGSQTADYEITRDTIPIETVFSEVKEKDGKKIGYLQVTQFSEPTADEFLEQLEQLESEEIDSLIIDVRGNP GGLLPAVIEMSEGFVPTSKPVVQIENADGDRDAQNGRAREAKPYDLFVLTDEGSASASEILTGAMKEGAGATIIGTKTFG KGVVQTAFDLEDGSNLKLTTSKWLTPDGNWINKKGIEPDIEVEQPDYFNVTRVLTEEESLQVGDYGDAVSNLHKILTGIG YEPGGQPGYYGDTMANAVKAFQTDNGLEASGTVDEETASALEAKLLEAIQDEANDAQLNRALEEAAK >Mature_467_residues MKNSTAGLLAGTTFVAGAGAGLATMAFTDTSLPIQTNAEGWDKVDQVRDLIEEHSLQDISEDDLLTGALDGMTAALNDPY SDFLDAEETSQFTDSIESSFEGIGATLEKKGEDILIVAPIKGAPAEEAGLRPGDIITAVDGESIEGMDVQEAVQLIRGEK GTTVTLTIRRGSQTADYEITRDTIPIETVFSEVKEKDGKKIGYLQVTQFSEPTADEFLEQLEQLESEEIDSLIIDVRGNP GGLLPAVIEMSEGFVPTSKPVVQIENADGDRDAQNGRAREAKPYDLFVLTDEGSASASEILTGAMKEGAGATIIGTKTFG KGVVQTAFDLEDGSNLKLTTSKWLTPDGNWINKKGIEPDIEVEQPDYFNVTRVLTEEESLQVGDYGDAVSNLHKILTGIG YEPGGQPGYYGDTMANAVKAFQTDNGLEASGTVDEETASALEAKLLEAIQDEANDAQLNRALEEAAK
Specific function: Involved in the signal transduction pathway leading to the proteolytic activation of the mother cell transcription factor pro-sigma-K during sporulation. The signaling serine protease CtpB triggers pro-sigma-K processing by cleaving the regulatory protein
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: Forespore intermembrane space. Note=Is expressed in both the mother cell and forespore compartments but that synthesis in the forespore is both necessary and sufficient for the proper timing of pro-sigma-K processing [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1788134, Length=340, Percent_Identity=31.1764705882353, Blast_Score=132, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR005151 - InterPro: IPR004447 - InterPro: IPR002477 [H]
Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41; PF01471 PG_binding_1 [H]
EC number: =3.4.21.102 [H]
Molecular weight: Translated: 49861; Mature: 49861
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSTAGLLAGTTFVAGAGAGLATMAFTDTSLPIQTNAEGWDKVDQVRDLIEEHSLQDIS CCCCCCCCEECCHHEECCCCCEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHCCCC EDDLLTGALDGMTAALNDPYSDFLDAEETSQFTDSIESSFEGIGATLEKKGEDILIVAPI CCHHHHHHHHCCHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECC KGAPAEEAGLRPGDIITAVDGESIEGMDVQEAVQLIRGEKGTTVTLTIRRGSQTADYEIT CCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEE RDTIPIETVFSEVKEKDGKKIGYLQVTQFSEPTADEFLEQLEQLESEEIDSLIIDVRGNP CCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC GGLLPAVIEMSEGFVPTSKPVVQIENADGDRDAQNGRAREAKPYDLFVLTDEGSASASEI CCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHH LTGAMKEGAGATIIGTKTFGKGVVQTAFDLEDGSNLKLTTSKWLTPDGNWINKKGIEPDI HHHHHHCCCCEEEEECCCCCCCHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCC EVEQPDYFNVTRVLTEEESLQVGDYGDAVSNLHKILTGIGYEPGGQPGYYGDTMANAVKA EECCCCCCCHHHEEECCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH FQTDNGLEASGTVDEETASALEAKLLEAIQDEANDAQLNRALEEAAK HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKNSTAGLLAGTTFVAGAGAGLATMAFTDTSLPIQTNAEGWDKVDQVRDLIEEHSLQDIS CCCCCCCCEECCHHEECCCCCEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHCCCC EDDLLTGALDGMTAALNDPYSDFLDAEETSQFTDSIESSFEGIGATLEKKGEDILIVAPI CCHHHHHHHHCCHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEECC KGAPAEEAGLRPGDIITAVDGESIEGMDVQEAVQLIRGEKGTTVTLTIRRGSQTADYEIT CCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEE RDTIPIETVFSEVKEKDGKKIGYLQVTQFSEPTADEFLEQLEQLESEEIDSLIIDVRGNP CCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC GGLLPAVIEMSEGFVPTSKPVVQIENADGDRDAQNGRAREAKPYDLFVLTDEGSASASEI CCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHH LTGAMKEGAGATIIGTKTFGKGVVQTAFDLEDGSNLKLTTSKWLTPDGNWINKKGIEPDI HHHHHHCCCCEEEEECCCCCCCHHHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCC EVEQPDYFNVTRVLTEEESLQVGDYGDAVSNLHKILTGIGYEPGGQPGYYGDTMANAVKA EECCCCCCCHHHEEECCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH FQTDNGLEASGTVDEETASALEAKLLEAIQDEANDAQLNRALEEAAK HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9570401; 9384377 [H]