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The map label for this gene is swrAB [H]

Identifier: 229916616

GI number: 229916616

Start: 842751

End: 843890

Strand: Reverse

Name: swrAB [H]

Synonym: EAT1b_0888

Alternate gene names: 229916616

Gene position: 843890-842751 (Counterclockwise)

Preceding gene: 229916617

Following gene: 229916613

Centisome position: 28.13

GC content: 52.02

Gene sequence:

>1140_bases
ATGAGTGTTACGGCTTTATTGACGTTGTTAGGTAGTCCGCTGTTTTGGGTGACACTCGTCGCCCTTACATACATATCGCT
GACACGGGTCAAGCGAGAACGGGCCATGTTCCGTTCGAGACGTCGCTCGCCGAAGTCGGAATGGAAACATTTCATCTGGC
CGAGTCTTCTGTTAGCGGTCCTCTCATCGATCGCGACGATTTTACTGGAGACGACCATCACGTTTGAGTGGGCCGTCTCG
TTCACGATTCTCTATACGCTCGTCGTCTTGACGATGCATCCGCGATTCTTTAATCTGGTGCTGCCTCTTCTCGTGTTGTT
CGGGGTCGTCCTGTTGCGCGATGTCGTCGCATATGGGGCGCTTCGCGATTGGGTAGAGGCACTCGCTCGGGTCGATTGGA
CGGTCTATGCGCTCACGTTCGGTCTCGTCACCCTTGCGGAATCGATTCTCTTACGTTGGAACGGATCAAAAGAGACGTCC
CCGACTTTGATCTTGTCGAAACGGGGACAGTTTATCGGAGGGCATGTCGTCAAACGGATTTGGTTTTTCCCGCTCGTTGT
GTTCATGCCACCGATGTTCGGTCTTGACTGGCCGATGATGCCCATCATTCTTCCGATTCCGATTGGGGTCAGTTTATTGT
CGACCGGCGCCTTACCAGGAACGCTTCTCGCACGATTGAGCAATTATCGTGCCGTACTCGCTTTGATCGCCCTCGGTCTA
TTCGGCCTCTCATATACGTTTGAGATTCCATATGTCGACTATGTAGTATTGACGCTATTCGTCCTCTATGAGCTCGGCTT
ACAATGGATCAAACGCGAGAATCGGGGAACGACACCCGTTTTCATCAACGGAAACCGTGGGGCGGTCATCGTCGACACGC
TACCGAACTCACCTGGAGAGGCGATGCAACTCATTCCGGGTGAATCGATCTATAAAGTTAACGGGACGGTCATCACCGGA
GGGCATAGTTTTTATGAGGCGCTCCAGCAACATAAGCCATACATCAAGCTGGAAGTGTTGAATCTGAACGGAGATATCCG
ATTTGTTCAACGGGCGATGTATGAGACCGATCCACATGAGCTCGGGATTTTGTTCGTTGGGGAACCGACGAGCCCGAGAG
TTCGCTTACGTAAACTGTAA

Upstream 100 bases:

>100_bases
CAAGATGAGGCGAATGACGCCCAGTTGAATCGAGCGCTTGAAGAAGCCGCAAAATAACGTTGTATGAAAGAAAGGGTTGG
ACCGCGTGGAAGTTGTACGA

Downstream 100 bases:

>100_bases
GAGTATCCGTTTTGGATACTCTTTTTTGCATACAAAATGGGCACCCGTAAGGATGCCCATTCGTCTTATACTTCAAGTTT
TGAAGGTTTGAATGCCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSVTALLTLLGSPLFWVTLVALTYISLTRVKRERAMFRSRRRSPKSEWKHFIWPSLLLAVLSSIATILLETTITFEWAVS
FTILYTLVVLTMHPRFFNLVLPLLVLFGVVLLRDVVAYGALRDWVEALARVDWTVYALTFGLVTLAESILLRWNGSKETS
PTLILSKRGQFIGGHVVKRIWFFPLVVFMPPMFGLDWPMMPIILPIPIGVSLLSTGALPGTLLARLSNYRAVLALIALGL
FGLSYTFEIPYVDYVVLTLFVLYELGLQWIKRENRGTTPVFINGNRGAVIVDTLPNSPGEAMQLIPGESIYKVNGTVITG
GHSFYEALQQHKPYIKLEVLNLNGDIRFVQRAMYETDPHELGILFVGEPTSPRVRLRKL

Sequences:

>Translated_379_residues
MSVTALLTLLGSPLFWVTLVALTYISLTRVKRERAMFRSRRRSPKSEWKHFIWPSLLLAVLSSIATILLETTITFEWAVS
FTILYTLVVLTMHPRFFNLVLPLLVLFGVVLLRDVVAYGALRDWVEALARVDWTVYALTFGLVTLAESILLRWNGSKETS
PTLILSKRGQFIGGHVVKRIWFFPLVVFMPPMFGLDWPMMPIILPIPIGVSLLSTGALPGTLLARLSNYRAVLALIALGL
FGLSYTFEIPYVDYVVLTLFVLYELGLQWIKRENRGTTPVFINGNRGAVIVDTLPNSPGEAMQLIPGESIYKVNGTVITG
GHSFYEALQQHKPYIKLEVLNLNGDIRFVQRAMYETDPHELGILFVGEPTSPRVRLRKL
>Mature_378_residues
SVTALLTLLGSPLFWVTLVALTYISLTRVKRERAMFRSRRRSPKSEWKHFIWPSLLLAVLSSIATILLETTITFEWAVSF
TILYTLVVLTMHPRFFNLVLPLLVLFGVVLLRDVVAYGALRDWVEALARVDWTVYALTFGLVTLAESILLRWNGSKETSP
TLILSKRGQFIGGHVVKRIWFFPLVVFMPPMFGLDWPMMPIILPIPIGVSLLSTGALPGTLLARLSNYRAVLALIALGLF
GLSYTFEIPYVDYVVLTLFVLYELGLQWIKRENRGTTPVFINGNRGAVIVDTLPNSPGEAMQLIPGESIYKVNGTVITGG
HSFYEALQQHKPYIKLEVLNLNGDIRFVQRAMYETDPHELGILFVGEPTSPRVRLRKL

Specific function: Required for surface-adhering cells to differentiate into hyperflagellated and elongated swarm cells [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42749; Mature: 42618

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTALLTLLGSPLFWVTLVALTYISLTRVKRERAMFRSRRRSPKSEWKHFIWPSLLLAV
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LSSIATILLETTITFEWAVSFTILYTLVVLTMHPRFFNLVLPLLVLFGVVLLRDVVAYGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRDWVEALARVDWTVYALTFGLVTLAESILLRWNGSKETSPTLILSKRGQFIGGHVVKRI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCHHHHHHHHHH
WFFPLVVFMPPMFGLDWPMMPIILPIPIGVSLLSTGALPGTLLARLSNYRAVLALIALGL
HHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FGLSYTFEIPYVDYVVLTLFVLYELGLQWIKRENRGTTPVFINGNRGAVIVDTLPNSPGE
HHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCC
AMQLIPGESIYKVNGTVITGGHSFYEALQQHKPYIKLEVLNLNGDIRFVQRAMYETDPHE
CEEECCCCCEEEECCEEEECCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCC
LGILFVGEPTSPRVRLRKL
EEEEEECCCCCCCEEEECC
>Mature Secondary Structure 
SVTALLTLLGSPLFWVTLVALTYISLTRVKRERAMFRSRRRSPKSEWKHFIWPSLLLAV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LSSIATILLETTITFEWAVSFTILYTLVVLTMHPRFFNLVLPLLVLFGVVLLRDVVAYGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRDWVEALARVDWTVYALTFGLVTLAESILLRWNGSKETSPTLILSKRGQFIGGHVVKRI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCHHHHHHHHHH
WFFPLVVFMPPMFGLDWPMMPIILPIPIGVSLLSTGALPGTLLARLSNYRAVLALIALGL
HHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
FGLSYTFEIPYVDYVVLTLFVLYELGLQWIKRENRGTTPVFINGNRGAVIVDTLPNSPGE
HHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCC
AMQLIPGESIYKVNGTVITGGHSFYEALQQHKPYIKLEVLNLNGDIRFVQRAMYETDPHE
CEEECCCCCEEEECCEEEECCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCCCC
LGILFVGEPTSPRVRLRKL
EEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]