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The map label for this gene is whiA

Identifier: 229916601

GI number: 229916601

Start: 824701

End: 825654

Strand: Reverse

Name: whiA

Synonym: EAT1b_0873

Alternate gene names: 229916601

Gene position: 825654-824701 (Counterclockwise)

Preceding gene: 229916602

Following gene: 229916600

Centisome position: 27.52

GC content: 51.89

Gene sequence:

>954_bases
ATGAGCTTTGCATCAGATGTGAAGAAGGAATTGACACAACTTGAAGTGACTGACGCGGAAGCGAAGGCGGAACTGTCGGC
ACTCGTTCGGATGAACGGGGTCATCTCGCTCGCCCTAGGACGAGGCATGACGCTCGACGTCTCGACGGAGAACGCCTCGA
TTGCCCGTCGGATTTACTCGTTGATGAAACGTCTTTACGACCATCCGTTAGACTTGTTCGTACGGAAGAAAATGCGTTTG
AAAAAGAACAACGTCTACATCGTCCGCGTGTCACAGCATGCGGAGACGATGCTTCGGGACCTTGAGATCCTCGGAGAGAA
TTACGAGATGATCCGGACACTGAACTCGGATATGACGGGGGACGAGAACTTAGCACGCGCTTACTTACGTGGTGCGTTCC
TCGCCGGCGGGTCGATCAACCATCCGAAAACGTCGTCGTACCACCTCGAAATCTACAGCTTGTACGAAAACCATAACCAG
GCGCTACGTGATTTGGCGAACCGATTTGAGTTGAACGCGAAGACGCTCGAACGGAAAAAAGGGCATATCTTGTACATGAA
AGAGAGCGAGAAAATTTCAGATTTCCTCAAGCTGATCGGGGCGACCCGAGGCATGTTGGAGTTTGAAGACGCACGAATCA
TCAAAGATATGCGGAACTCCGTCAACCGTCTCGTCAACTGTGAGACGGCCAACTTGAACAAGACGGTCGGTGCAGCATTG
CGTCAAGTCGAGAATATCAAGTTCTTGGAACGGACGGTCGGGCTCGACGTCTTACCGAAGAAACTGCGGGAGATTGCTGA
ACTGCGTGTCACACACCAGGACGTCTCGTTACAGGAACTCGGCGAAATGCTTGAGTCCGGTCCGATTTCGAAGTCAGGAA
TCAACCATAGACTTCGTAAAATTGACCAGATTGCCGAGCGCGTACGTAGCGGAGACGAAATCGCATCCTCGTGA

Upstream 100 bases:

>100_bases
CTCGTCATGCAGCGGGTGCTCCGTATCAAGAAGCCACGTTCGTTTCAAGAATTGGAACTGAAATAAAGATTGTTGGAAAG
ACAGAAAGGAGGGGGACTCG

Downstream 100 bases:

>100_bases
TGCGGTTGCGCCAAAACCATTCTTCCTATATAATAAGCAATTGTGTATAGGTTTTATGAATAGCGAATTAAAGGAGCTTC
ATCATTATGTCGAATGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSFASDVKKELTQLEVTDAEAKAELSALVRMNGVISLALGRGMTLDVSTENASIARRIYSLMKRLYDHPLDLFVRKKMRL
KKNNVYIVRVSQHAETMLRDLEILGENYEMIRTLNSDMTGDENLARAYLRGAFLAGGSINHPKTSSYHLEIYSLYENHNQ
ALRDLANRFELNAKTLERKKGHILYMKESEKISDFLKLIGATRGMLEFEDARIIKDMRNSVNRLVNCETANLNKTVGAAL
RQVENIKFLERTVGLDVLPKKLREIAELRVTHQDVSLQELGEMLESGPISKSGINHRLRKIDQIAERVRSGDEIASS

Sequences:

>Translated_317_residues
MSFASDVKKELTQLEVTDAEAKAELSALVRMNGVISLALGRGMTLDVSTENASIARRIYSLMKRLYDHPLDLFVRKKMRL
KKNNVYIVRVSQHAETMLRDLEILGENYEMIRTLNSDMTGDENLARAYLRGAFLAGGSINHPKTSSYHLEIYSLYENHNQ
ALRDLANRFELNAKTLERKKGHILYMKESEKISDFLKLIGATRGMLEFEDARIIKDMRNSVNRLVNCETANLNKTVGAAL
RQVENIKFLERTVGLDVLPKKLREIAELRVTHQDVSLQELGEMLESGPISKSGINHRLRKIDQIAERVRSGDEIASS
>Mature_316_residues
SFASDVKKELTQLEVTDAEAKAELSALVRMNGVISLALGRGMTLDVSTENASIARRIYSLMKRLYDHPLDLFVRKKMRLK
KNNVYIVRVSQHAETMLRDLEILGENYEMIRTLNSDMTGDENLARAYLRGAFLAGGSINHPKTSSYHLEIYSLYENHNQA
LRDLANRFELNAKTLERKKGHILYMKESEKISDFLKLIGATRGMLEFEDARIIKDMRNSVNRLVNCETANLNKTVGAALR
QVENIKFLERTVGLDVLPKKLREIAELRVTHQDVSLQELGEMLESGPISKSGINHRLRKIDQIAERVRSGDEIASS

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_EXISA (C4L5I7)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002885247.1
- GeneID:   7869039
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_0873
- OMA:   DSFFGIE
- ProtClustDB:   CLSK2489807
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478
- TIGRFAMs:   TIGR00647

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 36020; Mature: 35889

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFASDVKKELTQLEVTDAEAKAELSALVRMNGVISLALGRGMTLDVSTENASIARRIYS
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEEEECCCCEEEECCCCHHHHHHHHH
LMKRLYDHPLDLFVRKKMRLKKNNVYIVRVSQHAETMLRDLEILGENYEMIRTLNSDMTG
HHHHHHHCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
DENLARAYLRGAFLAGGSINHPKTSSYHLEIYSLYENHNQALRDLANRFELNAKTLERKK
CHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
GHILYMKESEKISDFLKLIGATRGMLEFEDARIIKDMRNSVNRLVNCETANLNKTVGAAL
CCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RQVENIKFLERTVGLDVLPKKLREIAELRVTHQDVSLQELGEMLESGPISKSGINHRLRK
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHH
IDQIAERVRSGDEIASS
HHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
SFASDVKKELTQLEVTDAEAKAELSALVRMNGVISLALGRGMTLDVSTENASIARRIYS
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEEEECCCCEEEECCCCHHHHHHHHH
LMKRLYDHPLDLFVRKKMRLKKNNVYIVRVSQHAETMLRDLEILGENYEMIRTLNSDMTG
HHHHHHHCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
DENLARAYLRGAFLAGGSINHPKTSSYHLEIYSLYENHNQALRDLANRFELNAKTLERKK
CHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
GHILYMKESEKISDFLKLIGATRGMLEFEDARIIKDMRNSVNRLVNCETANLNKTVGAAL
CCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RQVENIKFLERTVGLDVLPKKLREIAELRVTHQDVSLQELGEMLESGPISKSGINHRLRK
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHH
IDQIAERVRSGDEIASS
HHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA