| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is wcaI [H]
Identifier: 229916585
GI number: 229916585
Start: 809613
End: 810830
Strand: Reverse
Name: wcaI [H]
Synonym: EAT1b_0857
Alternate gene names: 229916585
Gene position: 810830-809613 (Counterclockwise)
Preceding gene: 229916586
Following gene: 229916584
Centisome position: 27.03
GC content: 51.31
Gene sequence:
>1218_bases TTGAAAACAATGCTTATGGTGTGTCAAAACTATTATCCGGAGATCGGCAGTGCCGGCAACCGGATGCAAAACATTACGCA TTTGATGAAACAGCGCGGGTATGAAGTCGAGGTCATCACGGCCGCTCCTTCATACCCGAGCTTTGATATGTACCAGGACG ACCGCTTCTGGAACGACCGGGAGTTAAACGACCAACCGTTCATCAAGCGACTCATCACGAAGAAACGGAAACATACGTCT AACATGGTCAGTCGTCTTTTCCTATTCCTCGAACAGATGGTCAAAGGAATCCGAGAAGTCCGTAAGCTTGAATTGAAGCC AGACGTCGTCTTTGCGACGACCCCTTCTTTTTTTATGGCGTTTGTCGGTGCTTATGCGAAACGAAAGTATCGTGTCCCGT TCATCTTGGACGTCCGTGACCTTTGGCCAGAATCGGTGAAAGGGGTCGGCGTCTTCAAATACGATTGGGTGCTCACGCCG GCTTTTTGGATGGAGAAACGACTGTATCGTGTCGCCGATGAAGTCATCATCAACTCGGAAGGATTCCGCAGCTATCTTCG TCAGCGTGGTGTGCCGAACGAGAAGATTCACTACATGCCGAACTCGATCCGGGAAGCGGAGCGAACACTCGAGCGGACGA TCCCATCGGACGACCGGATGGAGATCTTATACGCCGGGAACATGGGTCTTGCCCAGGATGTGTCGTTGTTACTCGAACTC GCCGAGCGATTCCGGGATGAGCCACGGATCCACTTCAAATTGATCGGCTACGGCTATCGGAAAGAAGAGTTGAAACAGAC GATCAAAGACCGTGGTTTCCAAAACTTCTTGTTCCTCGAGGCGATGCCACGGACAGAGGCGTTCCAGGCGATTAAAAATG CAGACGTCGCATTCGTCAGTCTGATCGAACAAGAAGTGTTCGATACGGTCATCCCTGGGAAACTCATCGACTATATGGCA GTCGGCAAACCGATTGTCGCAGCAGTGTCAGGCCATGCGGCGAATGTCATTGAAGCGGCGGAAGTCGGCTACGTGTCACG GAAACGTGACATCGATGAGATCGAGCGGATCCTACGGAAGCTCCTCGACCGACCGGATTTACGGGAGGCACTCGGGGCGA ACGGGATTCGTTACGTCAAAGAGAATTTATGTTGGGAAGAGAATATCGACGTGTTAGATCAAGTCGTACAACAGTTAGTG ATGGAGGAAACACGATGA
Upstream 100 bases:
>100_bases GATTTGCCACGCGCTCAGCGATCCTGATTTAAAAGATGACGTCCATGCCCTATTGAAGCGGCTCGTGGACGAACTTGATC AACAGTAAGGTGTGTTATTT
Downstream 100 bases:
>100_bases AGTCAGTATGTATGTTTGTATGGAACCATTTTACGAATGATGCGCGCGTCCTTCGTGAGTGCTCGGCACTTGCCGAGGCA GGCTATGAAGTCGATTTGAT
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MKTMLMVCQNYYPEIGSAGNRMQNITHLMKQRGYEVEVITAAPSYPSFDMYQDDRFWNDRELNDQPFIKRLITKKRKHTS NMVSRLFLFLEQMVKGIREVRKLELKPDVVFATTPSFFMAFVGAYAKRKYRVPFILDVRDLWPESVKGVGVFKYDWVLTP AFWMEKRLYRVADEVIINSEGFRSYLRQRGVPNEKIHYMPNSIREAERTLERTIPSDDRMEILYAGNMGLAQDVSLLLEL AERFRDEPRIHFKLIGYGYRKEELKQTIKDRGFQNFLFLEAMPRTEAFQAIKNADVAFVSLIEQEVFDTVIPGKLIDYMA VGKPIVAAVSGHAANVIEAAEVGYVSRKRDIDEIERILRKLLDRPDLREALGANGIRYVKENLCWEENIDVLDQVVQQLV MEETR
Sequences:
>Translated_405_residues MKTMLMVCQNYYPEIGSAGNRMQNITHLMKQRGYEVEVITAAPSYPSFDMYQDDRFWNDRELNDQPFIKRLITKKRKHTS NMVSRLFLFLEQMVKGIREVRKLELKPDVVFATTPSFFMAFVGAYAKRKYRVPFILDVRDLWPESVKGVGVFKYDWVLTP AFWMEKRLYRVADEVIINSEGFRSYLRQRGVPNEKIHYMPNSIREAERTLERTIPSDDRMEILYAGNMGLAQDVSLLLEL AERFRDEPRIHFKLIGYGYRKEELKQTIKDRGFQNFLFLEAMPRTEAFQAIKNADVAFVSLIEQEVFDTVIPGKLIDYMA VGKPIVAAVSGHAANVIEAAEVGYVSRKRDIDEIERILRKLLDRPDLREALGANGIRYVKENLCWEENIDVLDQVVQQLV MEETR >Mature_405_residues MKTMLMVCQNYYPEIGSAGNRMQNITHLMKQRGYEVEVITAAPSYPSFDMYQDDRFWNDRELNDQPFIKRLITKKRKHTS NMVSRLFLFLEQMVKGIREVRKLELKPDVVFATTPSFFMAFVGAYAKRKYRVPFILDVRDLWPESVKGVGVFKYDWVLTP AFWMEKRLYRVADEVIINSEGFRSYLRQRGVPNEKIHYMPNSIREAERTLERTIPSDDRMEILYAGNMGLAQDVSLLLEL AERFRDEPRIHFKLIGYGYRKEELKQTIKDRGFQNFLFLEAMPRTEAFQAIKNADVAFVSLIEQEVFDTVIPGKLIDYMA VGKPIVAAVSGHAANVIEAAEVGYVSRKRDIDEIERILRKLLDRPDLREALGANGIRYVKENLCWEENIDVLDQVVQQLV MEETR
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788363, Length=327, Percent_Identity=24.4648318042813, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 47324; Mature: 47324
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTMLMVCQNYYPEIGSAGNRMQNITHLMKQRGYEVEVITAAPSYPSFDMYQDDRFWNDR CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCC ELNDQPFIKRLITKKRKHTSNMVSRLFLFLEQMVKGIREVRKLELKPDVVFATTPSFFMA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHH FVGAYAKRKYRVPFILDVRDLWPESVKGVGVFKYDWVLTPAFWMEKRLYRVADEVIINSE HHHHHHHCCCCCCEEEEHHHCCHHHHCCCEEEEECCEECHHHHHHHHHHHHHHHHHCCCH GFRSYLRQRGVPNEKIHYMPNSIREAERTLERTIPSDDRMEILYAGNMGLAQDVSLLLEL HHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH AERFRDEPRIHFKLIGYGYRKEELKQTIKDRGFQNFLFLEAMPRTEAFQAIKNADVAFVS HHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCHHHHHH LIEQEVFDTVIPGKLIDYMAVGKPIVAAVSGHAANVIEAAEVGYVSRKRDIDEIERILRK HHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHH LLDRPDLREALGANGIRYVKENLCWEENIDVLDQVVQQLVMEETR HHCCCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTMLMVCQNYYPEIGSAGNRMQNITHLMKQRGYEVEVITAAPSYPSFDMYQDDRFWNDR CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCC ELNDQPFIKRLITKKRKHTSNMVSRLFLFLEQMVKGIREVRKLELKPDVVFATTPSFFMA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHH FVGAYAKRKYRVPFILDVRDLWPESVKGVGVFKYDWVLTPAFWMEKRLYRVADEVIINSE HHHHHHHCCCCCCEEEEHHHCCHHHHCCCEEEEECCEECHHHHHHHHHHHHHHHHHCCCH GFRSYLRQRGVPNEKIHYMPNSIREAERTLERTIPSDDRMEILYAGNMGLAQDVSLLLEL HHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH AERFRDEPRIHFKLIGYGYRKEELKQTIKDRGFQNFLFLEAMPRTEAFQAIKNADVAFVS HHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCHHHHHH LIEQEVFDTVIPGKLIDYMAVGKPIVAAVSGHAANVIEAAEVGYVSRKRDIDEIERILRK HHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHH LLDRPDLREALGANGIRYVKENLCWEENIDVLDQVVQQLVMEETR HHCCCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7815923; 8759852; 9097040; 9278503 [H]