| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yxkD [H]
Identifier: 229916583
GI number: 229916583
Start: 807341
End: 808228
Strand: Reverse
Name: yxkD [H]
Synonym: EAT1b_0855
Alternate gene names: 229916583
Gene position: 808228-807341 (Counterclockwise)
Preceding gene: 229916584
Following gene: 229916582
Centisome position: 26.94
GC content: 55.52
Gene sequence:
>888_bases ATGAAACGTCAACAACAACATCTATTGCGCCAACAGGTATGGCGCAAGCTACAAACCATCTCGGTGAAGGACATCGCCTG GATCATCGCGGGCTCATTCATTCTCTCGTTCGGGGTCAACTACTTCACCGTACCGAACGACTTCTCGGAAGGTGGCCTGC TCGGGGTCACGATCATCCTGTACTACGTGTTCGGCTGGGACCTCGGGCTCACGTCGATCATCGGGAACGGGATTCTCTTT ATCGTCGGCTATAAGCTGCTCGACCGTCGGACAATGGTCTATTCGGTCATCGCCGTCATCGCGACATCATTCTTCCTCAG TCTGACACATGACTGGGGCAGCCCTGCCGAGGACAAACTGCTTGCGGCCGTCTATGCCGGGATCATGATCGGGGTCGGAA TCGGCATGGTGCTCCGTGTCGGCGGGACGACCGGCGGGGGCGTCATCATCGCCCGTCTCATGGAACGCTATCTCCACTTG AGTGTCGCCGTCTCGATGTTCATCATCGATGCGATCGTCGTCGCGACATCTGGCTTCTTCTTAGGGGAACAAGTCGTTCT CTATACGCTCATCGCGATCATCATCGGTTCATGGGTCATCGATCTCGTCGCGGAAGGTCTCAACATCCGCAAGGCCGTCA CGATCATCAGCGACAAGCAAGAAGAGCTCGCCGTCGTCTTGACGGAGACGCTCGGACGCTCGGCGACGATCATCCATGGA CACGGTTACTACACGAAGCAGGATAAGAACATGTTGTATATGATCGTCGACAAACGTCAGATCGCACCACTCAAAAAAAT CGTCCAAGTGACGGACGACCGTGCCTTCGTCGTCATCCACCAGGTGAAGGAAGTCATCGGGGAAGGATTCAGCTACCCGT CCCGATAA
Upstream 100 bases:
>100_bases AGCGCAAGTTGCCGATTATGAAAGACGGTGCGCCAAAGCCAGTACAATCTTAAGACTGCGGCTTTTGCCGCGGTCTTTTT TCTATGGAGGGAGGACATTT
Downstream 100 bases:
>100_bases TTTGAATGCTGGTGTTTTATTGATAACTTCTATATAATAAAAGGCGTGTAAATAGAAGGAGGAACTGACTACTATGCAAA CGATCGCTACAATCAGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKRQQQHLLRQQVWRKLQTISVKDIAWIIAGSFILSFGVNYFTVPNDFSEGGLLGVTIILYYVFGWDLGLTSIIGNGILF IVGYKLLDRRTMVYSVIAVIATSFFLSLTHDWGSPAEDKLLAAVYAGIMIGVGIGMVLRVGGTTGGGVIIARLMERYLHL SVAVSMFIIDAIVVATSGFFLGEQVVLYTLIAIIIGSWVIDLVAEGLNIRKAVTIISDKQEELAVVLTETLGRSATIIHG HGYYTKQDKNMLYMIVDKRQIAPLKKIVQVTDDRAFVVIHQVKEVIGEGFSYPSR
Sequences:
>Translated_295_residues MKRQQQHLLRQQVWRKLQTISVKDIAWIIAGSFILSFGVNYFTVPNDFSEGGLLGVTIILYYVFGWDLGLTSIIGNGILF IVGYKLLDRRTMVYSVIAVIATSFFLSLTHDWGSPAEDKLLAAVYAGIMIGVGIGMVLRVGGTTGGGVIIARLMERYLHL SVAVSMFIIDAIVVATSGFFLGEQVVLYTLIAIIIGSWVIDLVAEGLNIRKAVTIISDKQEELAVVLTETLGRSATIIHG HGYYTKQDKNMLYMIVDKRQIAPLKKIVQVTDDRAFVVIHQVKEVIGEGFSYPSR >Mature_295_residues MKRQQQHLLRQQVWRKLQTISVKDIAWIIAGSFILSFGVNYFTVPNDFSEGGLLGVTIILYYVFGWDLGLTSIIGNGILF IVGYKLLDRRTMVYSVIAVIATSFFLSLTHDWGSPAEDKLLAAVYAGIMIGVGIGMVLRVGGTTGGGVIIARLMERYLHL SVAVSMFIIDAIVVATSGFFLGEQVVLYTLIAIIIGSWVIDLVAEGLNIRKAVTIISDKQEELAVVLTETLGRSATIIHG HGYYTKQDKNMLYMIVDKRQIAPLKKIVQVTDDRAFVVIHQVKEVIGEGFSYPSR
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0750 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 - InterPro: IPR019264 [H]
Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]
EC number: NA
Molecular weight: Translated: 32618; Mature: 32618
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRQQQHLLRQQVWRKLQTISVKDIAWIIAGSFILSFGVNYFTVPNDFSEGGLLGVTIIL CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHH YYVFGWDLGLTSIIGNGILFIVGYKLLDRRTMVYSVIAVIATSFFLSLTHDWGSPAEDKL HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LAAVYAGIMIGVGIGMVLRVGGTTGGGVIIARLMERYLHLSVAVSMFIIDAIVVATSGFF HHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LGEQVVLYTLIAIIIGSWVIDLVAEGLNIRKAVTIISDKQEELAVVLTETLGRSATIIHG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCHHHHHHHHHHHCCCCEEEEEC HGYYTKQDKNMLYMIVDKRQIAPLKKIVQVTDDRAFVVIHQVKEVIGEGFSYPSR CCEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKRQQQHLLRQQVWRKLQTISVKDIAWIIAGSFILSFGVNYFTVPNDFSEGGLLGVTIIL CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHH YYVFGWDLGLTSIIGNGILFIVGYKLLDRRTMVYSVIAVIATSFFLSLTHDWGSPAEDKL HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LAAVYAGIMIGVGIGMVLRVGGTTGGGVIIARLMERYLHLSVAVSMFIIDAIVVATSGFF HHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LGEQVVLYTLIAIIIGSWVIDLVAEGLNIRKAVTIISDKQEELAVVLTETLGRSATIIHG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCHHHHHHHHHHHCCCCEEEEEC HGYYTKQDKNMLYMIVDKRQIAPLKKIVQVTDDRAFVVIHQVKEVIGEGFSYPSR CCEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]