| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916576
Identifier: 229916576
GI number: 229916576
Start: 800786
End: 801745
Strand: Reverse
Name: 229916576
Synonym: EAT1b_0848
Alternate gene names: NA
Gene position: 801745-800786 (Counterclockwise)
Preceding gene: 229916577
Following gene: 229916575
Centisome position: 26.73
GC content: 39.58
Gene sequence:
>960_bases TTGGGATGGAATTTACGTGTCGCTGAGGCGAAAGATGTGTATTTAACCGAATCAGACCTATGGCGCTTTACACAACAATT TCTGATGAACGCTTCTCATACGACGACGTACAAACACGTATTGATGAAGGCGTTACTGGAATGTACGACAGAATTGAATG AATCAGGTGTCGTGTCATTTCATCAGATTGCCAAACATGTGACGAAAATCTATTGGAATCTCATCGTCAAGCATGGGCTG ACACAGATGAATCAATTGGGGAAGCAGAGCGCTGTTGAAAAAGCGATGGTCTCCTTTCAGAAAGAACACAACATTCCGCC AGATTGGAACTTCGACCGCTTACCAGAGCATCAACAAAATCAATTGATTCGGAACGTGAATCAATTTTATAAAAAATACG TATACGGTTCTTTCTATCGCTCCTTTAACGAAACGATTTACTCTTTCAATCGAAAAGAAGAGTGGATTCAACTCGTTCCA GCGTATGTCGTTTTCTTTGAAAAATATAAGCATATTCTCATGAACGTGACAAACTATCAGTTAGCCATCTTTTTAGAAAA ATACAATTCCCAGGATGCGATGGAACGAATTTTGAGCAAGCTGGAGTTTGTGTCTGCCCGTCAGTCGCTTGAGGAGTTTA AACAAATTTTATTAAGTCACGGGCACTCAATGTGCTTCTATTGCCTAAAGCCTGTTAAACAAATTCACGTGGATCATTTC ATTCCTTGGTCTTATATGCAAAATGATGTCTTATGGAATTTTGTGCTGTCATGCCCGACATGTAATACGAGTAGAGATAA TCGATTAGCGAATATCGATTATCTCTACAATTTGGTAGAGCGAAATCATGAACTGCGTACGGCAGAACACATGTCTACAT ACAAAGAATCGAAACTCATTCATTTGTATCACTATGCCGTTCAAAATGGCTATGAAAACAATTGGACTCCGAAGGCATGA
Upstream 100 bases:
>100_bases CAAATCAAAAGAGAGTTTTCTGCTCCTGTATGAAGCACCACGATCCACTTCCTATCTGTATTCGTTATAATCAATAGTGT AATGGATGGAGGTGGAGTCG
Downstream 100 bases:
>100_bases AAAAAGTCGGTCTACGTGTCTGCATACTCTATCAATGAACGGTCAAACCGCCACCGTAACCTTCCAGAGAGTAAATAAAG AAATAAAAATGAGCAATGCG
Product: HNH endonuclease
Products: NA
Alternate protein names: HNH Nuclease; HNH EndonucleaseHNH Nuclease
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MGWNLRVAEAKDVYLTESDLWRFTQQFLMNASHTTTYKHVLMKALLECTTELNESGVVSFHQIAKHVTKIYWNLIVKHGL TQMNQLGKQSAVEKAMVSFQKEHNIPPDWNFDRLPEHQQNQLIRNVNQFYKKYVYGSFYRSFNETIYSFNRKEEWIQLVP AYVVFFEKYKHILMNVTNYQLAIFLEKYNSQDAMERILSKLEFVSARQSLEEFKQILLSHGHSMCFYCLKPVKQIHVDHF IPWSYMQNDVLWNFVLSCPTCNTSRDNRLANIDYLYNLVERNHELRTAEHMSTYKESKLIHLYHYAVQNGYENNWTPKA
Sequences:
>Translated_319_residues MGWNLRVAEAKDVYLTESDLWRFTQQFLMNASHTTTYKHVLMKALLECTTELNESGVVSFHQIAKHVTKIYWNLIVKHGL TQMNQLGKQSAVEKAMVSFQKEHNIPPDWNFDRLPEHQQNQLIRNVNQFYKKYVYGSFYRSFNETIYSFNRKEEWIQLVP AYVVFFEKYKHILMNVTNYQLAIFLEKYNSQDAMERILSKLEFVSARQSLEEFKQILLSHGHSMCFYCLKPVKQIHVDHF IPWSYMQNDVLWNFVLSCPTCNTSRDNRLANIDYLYNLVERNHELRTAEHMSTYKESKLIHLYHYAVQNGYENNWTPKA >Mature_318_residues GWNLRVAEAKDVYLTESDLWRFTQQFLMNASHTTTYKHVLMKALLECTTELNESGVVSFHQIAKHVTKIYWNLIVKHGLT QMNQLGKQSAVEKAMVSFQKEHNIPPDWNFDRLPEHQQNQLIRNVNQFYKKYVYGSFYRSFNETIYSFNRKEEWIQLVPA YVVFFEKYKHILMNVTNYQLAIFLEKYNSQDAMERILSKLEFVSARQSLEEFKQILLSHGHSMCFYCLKPVKQIHVDHFI PWSYMQNDVLWNFVLSCPTCNTSRDNRLANIDYLYNLVERNHELRTAEHMSTYKESKLIHLYHYAVQNGYENNWTPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38141; Mature: 38010
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWNLRVAEAKDVYLTESDLWRFTQQFLMNASHTTTYKHVLMKALLECTTELNESGVVSF CCCCCEEECCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH HQIAKHVTKIYWNLIVKHGLTQMNQLGKQSAVEKAMVSFQKEHNIPPDWNFDRLPEHQQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH QLIRNVNQFYKKYVYGSFYRSFNETIYSFNRKEEWIQLVPAYVVFFEKYKHILMNVTNYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LAIFLEKYNSQDAMERILSKLEFVSARQSLEEFKQILLSHGHSMCFYCLKPVKQIHVDHF EEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC IPWSYMQNDVLWNFVLSCPTCNTSRDNRLANIDYLYNLVERNHELRTAEHMSTYKESKLI CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHH HLYHYAVQNGYENNWTPKA HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GWNLRVAEAKDVYLTESDLWRFTQQFLMNASHTTTYKHVLMKALLECTTELNESGVVSF CCCCEEECCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH HQIAKHVTKIYWNLIVKHGLTQMNQLGKQSAVEKAMVSFQKEHNIPPDWNFDRLPEHQQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH QLIRNVNQFYKKYVYGSFYRSFNETIYSFNRKEEWIQLVPAYVVFFEKYKHILMNVTNYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LAIFLEKYNSQDAMERILSKLEFVSARQSLEEFKQILLSHGHSMCFYCLKPVKQIHVDHF EEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC IPWSYMQNDVLWNFVLSCPTCNTSRDNRLANIDYLYNLVERNHELRTAEHMSTYKESKLI CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHH HLYHYAVQNGYENNWTPKA HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA