Click here to switch to the map view.

The map label for this gene is ybjT [H]

Identifier: 229916565

GI number: 229916565

Start: 793334

End: 794746

Strand: Reverse

Name: ybjT [H]

Synonym: EAT1b_0836

Alternate gene names: 229916565

Gene position: 794746-793334 (Counterclockwise)

Preceding gene: 229916566

Following gene: 229916564

Centisome position: 26.49

GC content: 54.64

Gene sequence:

>1413_bases
ATGCGGAAAACGATTGTCATTGCGGGGGCGAGCGGCTATATCGGCTCGAACGTGATGGAGCAGCTGAAGGAAGAGTATGA
CATCATCGCTTTATCGCGATCGACGAAGAATAAAGAAGATGAGGCCCATATCACGTGGCGTGCCTGTGATTTGTTTTCAT
ATGAGGCAACAAAAGAAGCATGTGAGGGCGCGGATTACGCGATGTTCCTCGTGCACTCGATGATTCCGGATGGCGGCTTG
ACGCAGGCGACGTTCGAGGACATGGATGCGCTCATTGCCGATAACTTCGCCCGGGCGACGAAGGCGAACGACATTGAGCA
GATCGTCTATTTGAGTGGGATCATCCCGAAACAAGAGAAGACGTTGTCGCGTCATTTGAAGAGTCGACTCGAAGTCGAAC
GCATCCTCGGCGGTCAGGGCGTGCCGGTGACGACGATTCGGGCTGGACTCATCATCGGTCCGGAAGGTTCATCGTTCCCG
ATTTTAGCGAAGCTCGTCAAACGGTTGCCGACGATGATCTTGCCACGCTGGACGAAGACGGAGACACATCCGATCGACAT
CCGTGAAGCCGTTCAGGCGCTCATCTCGGTCGTCGGTGCCGAGTCGCTTTATGACCGTCATATCGACATCGGGGGTCCCG
AGGTGATGACGTATCGGAAGATGATCGAACAGACGGCCGAAGTCATGGATAAGCGTCGCATCTTGATTGACTTCCCGTTC
CCGACAATCAAACTGTCGCGCCTGTGGGTCATGGCGGTCACGGGTGAACCGAAGGCGACCGTCTATCCGCTCGTCGAGAG
CATGGGGCACGCGATGGTGGCAGAAGATACGGTCGAAGGTATCGGTCAGGGAGAGATTCCGTTCAAACAGGCGGTCGAAC
ATGCGCTTGAGGAAGAAGAGAAGCAGTCCTCGGGCGGTAAGAAGAAAAAGCAACCGAAATCGTATACGGTCCGTTCGATT
CAGCGGTTCGGTCTGCCGGAAGAAAAGTCGGCGCTTTGGATGGCGGACACGTACTTCGAGTGGCTCGGTCGTTTTATGTA
TCCGCTCATTCAGACGACGAAAGAAGACGATGATTGGGAGATCGCGCTGCTCGATCCGTCGTTCGTCGCGCTTCATCTAT
CGCTTGAACAGGAAGCGACGGACGATATGGCATCCTTTGCGATTGACGGGGGCAAGTTCGTCAAGTTAAGTGAAGAGGAT
AAGACAGGGCGTCTCGAGTTCCGGAGATTACCGGATTCGGATGAAGGACTCGTCGCCATCCATGAGTTCGTACCGGCCCT
CCCGTGGTGGTTCTATACGAAGACACAGGCGAAAGCTCATCTCGTCGTCATGTGGTTATTCGGTCGTCATGTGAAGTTGC
TGGCGAAAGACGCGAAAGATGGCGATCAAGTCGTAGAGGCTCCGACGAATTGA

Upstream 100 bases:

>100_bases
TGTAAAGTTGAATAAACTTTCTATATATCCTTAGACTGATTTATCTTTTAAAAAAGAAGGGTACATTACCTCTATGCGAA
TAATTAGGGGAGTGAACATT

Downstream 100 bases:

>100_bases
ATGTGATGAAGTAGTGGAAGACAGTGACCCTGTCTTCTTTTTTTTGCCCAATGGTCTCGATCTTCATCTAATTTTTAATG
TTGATGTACCCATAAGACTC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MRKTIVIAGASGYIGSNVMEQLKEEYDIIALSRSTKNKEDEAHITWRACDLFSYEATKEACEGADYAMFLVHSMIPDGGL
TQATFEDMDALIADNFARATKANDIEQIVYLSGIIPKQEKTLSRHLKSRLEVERILGGQGVPVTTIRAGLIIGPEGSSFP
ILAKLVKRLPTMILPRWTKTETHPIDIREAVQALISVVGAESLYDRHIDIGGPEVMTYRKMIEQTAEVMDKRRILIDFPF
PTIKLSRLWVMAVTGEPKATVYPLVESMGHAMVAEDTVEGIGQGEIPFKQAVEHALEEEEKQSSGGKKKKQPKSYTVRSI
QRFGLPEEKSALWMADTYFEWLGRFMYPLIQTTKEDDDWEIALLDPSFVALHLSLEQEATDDMASFAIDGGKFVKLSEED
KTGRLEFRRLPDSDEGLVAIHEFVPALPWWFYTKTQAKAHLVVMWLFGRHVKLLAKDAKDGDQVVEAPTN

Sequences:

>Translated_470_residues
MRKTIVIAGASGYIGSNVMEQLKEEYDIIALSRSTKNKEDEAHITWRACDLFSYEATKEACEGADYAMFLVHSMIPDGGL
TQATFEDMDALIADNFARATKANDIEQIVYLSGIIPKQEKTLSRHLKSRLEVERILGGQGVPVTTIRAGLIIGPEGSSFP
ILAKLVKRLPTMILPRWTKTETHPIDIREAVQALISVVGAESLYDRHIDIGGPEVMTYRKMIEQTAEVMDKRRILIDFPF
PTIKLSRLWVMAVTGEPKATVYPLVESMGHAMVAEDTVEGIGQGEIPFKQAVEHALEEEEKQSSGGKKKKQPKSYTVRSI
QRFGLPEEKSALWMADTYFEWLGRFMYPLIQTTKEDDDWEIALLDPSFVALHLSLEQEATDDMASFAIDGGKFVKLSEED
KTGRLEFRRLPDSDEGLVAIHEFVPALPWWFYTKTQAKAHLVVMWLFGRHVKLLAKDAKDGDQVVEAPTN
>Mature_470_residues
MRKTIVIAGASGYIGSNVMEQLKEEYDIIALSRSTKNKEDEAHITWRACDLFSYEATKEACEGADYAMFLVHSMIPDGGL
TQATFEDMDALIADNFARATKANDIEQIVYLSGIIPKQEKTLSRHLKSRLEVERILGGQGVPVTTIRAGLIIGPEGSSFP
ILAKLVKRLPTMILPRWTKTETHPIDIREAVQALISVVGAESLYDRHIDIGGPEVMTYRKMIEQTAEVMDKRRILIDFPF
PTIKLSRLWVMAVTGEPKATVYPLVESMGHAMVAEDTVEGIGQGEIPFKQAVEHALEEEEKQSSGGKKKKQPKSYTVRSI
QRFGLPEEKSALWMADTYFEWLGRFMYPLIQTTKEDDDWEIALLDPSFVALHLSLEQEATDDMASFAIDGGKFVKLSEED
KTGRLEFRRLPDSDEGLVAIHEFVPALPWWFYTKTQAKAHLVVMWLFGRHVKLLAKDAKDGDQVVEAPTN

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=307, Percent_Identity=31.5960912052117, Blast_Score=146, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 52837; Mature: 52837

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTIVIAGASGYIGSNVMEQLKEEYDIIALSRSTKNKEDEAHITWRACDLFSYEATKEA
CCCEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEEEHHCHHHHHHH
CEGADYAMFLVHSMIPDGGLTQATFEDMDALIADNFARATKANDIEQIVYLSGIIPKQEK
HCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHH
TLSRHLKSRLEVERILGGQGVPVTTIRAGLIIGPEGSSFPILAKLVKRLPTMILPRWTKT
HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC
ETHPIDIREAVQALISVVGAESLYDRHIDIGGPEVMTYRKMIEQTAEVMDKRRILIDFPF
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCC
PTIKLSRLWVMAVTGEPKATVYPLVESMGHAMVAEDTVEGIGQGEIPFKQAVEHALEEEE
CCEEEEEEEEEEECCCCCCHHHHHHHHCCCCEEHHHHHHCCCCCCCCHHHHHHHHHHHHH
KQSSGGKKKKQPKSYTVRSIQRFGLPEEKSALWMADTYFEWLGRFMYPLIQTTKEDDDWE
HHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEE
IALLDPSFVALHLSLEQEATDDMASFAIDGGKFVKLSEEDKTGRLEFRRLPDSDEGLVAI
EEEECCCEEEEEEEECHHHHHHHHHHEECCCEEEEECCCCCCCCEEEEECCCCCCCEEEH
HEFVPALPWWFYTKTQAKAHLVVMWLFGRHVKLLAKDAKDGDQVVEAPTN
HHHHCCCCEEEEECCCCCCEEEEEEHHCCHHEEHHHCCCCCCHHCCCCCC
>Mature Secondary Structure
MRKTIVIAGASGYIGSNVMEQLKEEYDIIALSRSTKNKEDEAHITWRACDLFSYEATKEA
CCCEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEEEHHCHHHHHHH
CEGADYAMFLVHSMIPDGGLTQATFEDMDALIADNFARATKANDIEQIVYLSGIIPKQEK
HCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHH
TLSRHLKSRLEVERILGGQGVPVTTIRAGLIIGPEGSSFPILAKLVKRLPTMILPRWTKT
HHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC
ETHPIDIREAVQALISVVGAESLYDRHIDIGGPEVMTYRKMIEQTAEVMDKRRILIDFPF
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCC
PTIKLSRLWVMAVTGEPKATVYPLVESMGHAMVAEDTVEGIGQGEIPFKQAVEHALEEEE
CCEEEEEEEEEEECCCCCCHHHHHHHHCCCCEEHHHHHHCCCCCCCCHHHHHHHHHHHHH
KQSSGGKKKKQPKSYTVRSIQRFGLPEEKSALWMADTYFEWLGRFMYPLIQTTKEDDDWE
HHHCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEE
IALLDPSFVALHLSLEQEATDDMASFAIDGGKFVKLSEEDKTGRLEFRRLPDSDEGLVAI
EEEECCCEEEEEEEECHHHHHHHHHHEECCCEEEEECCCCCCCCEEEEECCCCCCCEEEH
HEFVPALPWWFYTKTQAKAHLVVMWLFGRHVKLLAKDAKDGDQVVEAPTN
HHHHCCCCEEEEECCCCCCEEEEEEHHCCHHEEHHHCCCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]