| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is uvrX [H]
Identifier: 229916557
GI number: 229916557
Start: 785718
End: 787013
Strand: Direct
Name: uvrX [H]
Synonym: EAT1b_0828
Alternate gene names: 229916557
Gene position: 785718-787013 (Clockwise)
Preceding gene: 229916550
Following gene: 229916558
Centisome position: 26.19
GC content: 58.02
Gene sequence:
>1296_bases ATGCGCAGACGAATCTTTTGTATCGACAGCGTCTCGTTCTATGCCAGTTGCGAGTGTGCCGCGCGCAACAAAAATCCTTA TCAGACGAAGCTCGTCGTCCTCTCGAACCTACAGGACAGCGGGGCACTCGTCCTCGCCGCGACCCCGAAGATGAAGCAGC TCGGCATCAAGACCGGGTCACGCCGCTTCCACATCGACCGCCTCCCGTGGCACGAACGACGGGACGTTTTGTATGCCGAG GCACGGATGAGTCATTATTTGAACGTTTCCATTCAAATCATCCACATCCTGCATCAGTTCGCCCCGCCCGAGGCGATTCG CGTCTATTCGATTGATGAGACGCTCGTCGACATGAGCGGGACGGAGCGGTTGTTCGGAAATGACGAGCACGTCGCCCACC TCATGCGTGCGACGATCTTTCGCTATACAGGCATTCCCGTCACCATCGGCATCGGACCGAACAACGTCCTCGCCAAGCTC GTCCTCGATTTGCATGCAAAAAAGGAAGGTGTCGCCACGTGCCTTCTCCAAGACGTCGAACGGCTTATCCATCCGGCGCC GATCGAGAAGATGTGGGGCGTCGGAACGAAGATGGCGGTCCACCTGCAGCGACTCGGCATCTGGACGATTGGGGACTTGG CCCGCTACCCACTCGAATCCCTTCATGAAAAGTTCGGTGTCATCGGTGCAGAACTTTGGCATCACGCTTGGGGCATCGAC GAGTCGCCGACCATCCTGCCGGCGAGCTCCTTGTTCGGTGCGAAACGGATGCGACCGAAGTCGATCGGACACGGCATCAC CCTCATGAAAGACTACACGGCGTATTCCGCAATCCGGCTCGTCTTACAAGCGATTGCGGTCGAAGTCGGCATGCGAACCA GGCAAGCGGGACTCGTCGGAGGGACAATCCATCTCGGGGTGCGCTATACGCGGACGAGCGACCGGGGTGGCTTCAGTAAA CAAAAGAAGCTCCCCCGCTTCACAGCGGACGAGCAAGAGTTTCTCCCCATCTTATTGCAGCTATTTTTAGACGGCTGGGA AGAGACGGAGGCCGTCCGTTACGTCTCGGTCGCTCTCGGCAAACTCGAGCCACGGAGCGACCACGTCCAGTTATCGTTCT TCGAAGACGAATGGGCGAAAGCGAAACGGCTCGACTTCCTCGATTTGATCGACGGCCTGAACGTCCGGTTCGGTCGTGGC ACGATCCGACCGGCGTCGAGCCTACTAAAAGACAGTCCGCTCCGGACGCGCCAACGTCTAATCGGCGGACATAAACAAGG AGGCGATTCCTCATGA
Upstream 100 bases:
>100_bases GTATTTGTAAAAATATTTTCAATTCACTATTTGAGATGATGTGAGACCGTGTTACGATGAAAAAAAACAGAACATTTGTT CGTGAAAAGGAGTGGTGACG
Downstream 100 bases:
>100_bases GCAAGACCCGCTATCGTGACCGGGGTGAGTTGAAATGGATCCCATTTCTCATGCCCGAGCACGTCGCCCTACTGAAACGT TATTATGCCCAAATCCAAAA
Product: DNA-directed DNA polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MRRRIFCIDSVSFYASCECAARNKNPYQTKLVVLSNLQDSGALVLAATPKMKQLGIKTGSRRFHIDRLPWHERRDVLYAE ARMSHYLNVSIQIIHILHQFAPPEAIRVYSIDETLVDMSGTERLFGNDEHVAHLMRATIFRYTGIPVTIGIGPNNVLAKL VLDLHAKKEGVATCLLQDVERLIHPAPIEKMWGVGTKMAVHLQRLGIWTIGDLARYPLESLHEKFGVIGAELWHHAWGID ESPTILPASSLFGAKRMRPKSIGHGITLMKDYTAYSAIRLVLQAIAVEVGMRTRQAGLVGGTIHLGVRYTRTSDRGGFSK QKKLPRFTADEQEFLPILLQLFLDGWEETEAVRYVSVALGKLEPRSDHVQLSFFEDEWAKAKRLDFLDLIDGLNVRFGRG TIRPASSLLKDSPLRTRQRLIGGHKQGGDSS
Sequences:
>Translated_431_residues MRRRIFCIDSVSFYASCECAARNKNPYQTKLVVLSNLQDSGALVLAATPKMKQLGIKTGSRRFHIDRLPWHERRDVLYAE ARMSHYLNVSIQIIHILHQFAPPEAIRVYSIDETLVDMSGTERLFGNDEHVAHLMRATIFRYTGIPVTIGIGPNNVLAKL VLDLHAKKEGVATCLLQDVERLIHPAPIEKMWGVGTKMAVHLQRLGIWTIGDLARYPLESLHEKFGVIGAELWHHAWGID ESPTILPASSLFGAKRMRPKSIGHGITLMKDYTAYSAIRLVLQAIAVEVGMRTRQAGLVGGTIHLGVRYTRTSDRGGFSK QKKLPRFTADEQEFLPILLQLFLDGWEETEAVRYVSVALGKLEPRSDHVQLSFFEDEWAKAKRLDFLDLIDGLNVRFGRG TIRPASSLLKDSPLRTRQRLIGGHKQGGDSS >Mature_431_residues MRRRIFCIDSVSFYASCECAARNKNPYQTKLVVLSNLQDSGALVLAATPKMKQLGIKTGSRRFHIDRLPWHERRDVLYAE ARMSHYLNVSIQIIHILHQFAPPEAIRVYSIDETLVDMSGTERLFGNDEHVAHLMRATIFRYTGIPVTIGIGPNNVLAKL VLDLHAKKEGVATCLLQDVERLIHPAPIEKMWGVGTKMAVHLQRLGIWTIGDLARYPLESLHEKFGVIGAELWHHAWGID ESPTILPASSLFGAKRMRPKSIGHGITLMKDYTAYSAIRLVLQAIAVEVGMRTRQAGLVGGTIHLGVRYTRTSDRGGFSK QKKLPRFTADEQEFLPILLQLFLDGWEETEAVRYVSVALGKLEPRSDHVQLSFFEDEWAKAKRLDFLDLIDGLNVRFGRG TIRPASSLLKDSPLRTRQRLIGGHKQGGDSS
Specific function: Involved In Uv Protection And Mutation. Essential For Induced (Or Sos) Mutagenesis. May Modify The DNA Replication Machinery To Allow Bypass Synthesis Across A Damaged Template. [C]
COG id: COG0389
COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 umuC domain [H]
Homologues:
Organism=Escherichia coli, GI1787432, Length=418, Percent_Identity=24.6411483253589, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1786425, Length=290, Percent_Identity=23.448275862069, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017962 - InterPro: IPR017961 - InterPro: IPR001126 - InterPro: IPR017963 [H]
Pfam domain/function: PF00817 IMS [H]
EC number: NA
Molecular weight: Translated: 48459; Mature: 48459
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50173 UMUC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRIFCIDSVSFYASCECAARNKNPYQTKLVVLSNLQDSGALVLAATPKMKQLGIKTGS CCCEEEEEECCCEEEEEEHHCCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHHCCCCCC RRFHIDRLPWHERRDVLYAEARMSHYLNVSIQIIHILHQFAPPEAIRVYSIDETLVDMSG CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCC TERLFGNDEHVAHLMRATIFRYTGIPVTIGIGPNNVLAKLVLDLHAKKEGVATCLLQDVE CHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHH RLIHPAPIEKMWGVGTKMAVHLQRLGIWTIGDLARYPLESLHEKFGVIGAELWHHAWGID HHHCCCCHHHHHCCCHHHHHHHHHCCCEEHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCC ESPTILPASSLFGAKRMRPKSIGHGITLMKDYTAYSAIRLVLQAIAVEVGMRTRQAGLVG CCCCEEECHHHHCHHCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC GTIHLGVRYTRTSDRGGFSKQKKLPRFTADEQEFLPILLQLFLDGWEETEAVRYVSVALG CEEEEEEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH KLEPRSDHVQLSFFEDEWAKAKRLDFLDLIDGLNVRFGRGTIRPASSLLKDSPLRTRQRL CCCCCCCCEEEEEECHHHHHHHHCHHHHHHCCCCEEECCCCCCHHHHHHHCCCHHHHHHH IGGHKQGGDSS HCCCCCCCCCC >Mature Secondary Structure MRRRIFCIDSVSFYASCECAARNKNPYQTKLVVLSNLQDSGALVLAATPKMKQLGIKTGS CCCEEEEEECCCEEEEEEHHCCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHHCCCCCC RRFHIDRLPWHERRDVLYAEARMSHYLNVSIQIIHILHQFAPPEAIRVYSIDETLVDMSG CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCC TERLFGNDEHVAHLMRATIFRYTGIPVTIGIGPNNVLAKLVLDLHAKKEGVATCLLQDVE CHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHH RLIHPAPIEKMWGVGTKMAVHLQRLGIWTIGDLARYPLESLHEKFGVIGAELWHHAWGID HHHCCCCHHHHHCCCHHHHHHHHHCCCEEHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCC ESPTILPASSLFGAKRMRPKSIGHGITLMKDYTAYSAIRLVLQAIAVEVGMRTRQAGLVG CCCCEEECHHHHCHHCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC GTIHLGVRYTRTSDRGGFSKQKKLPRFTADEQEFLPILLQLFLDGWEETEAVRYVSVALG CEEEEEEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH KLEPRSDHVQLSFFEDEWAKAKRLDFLDLIDGLNVRFGRGTIRPASSLLKDSPLRTRQRL CCCCCCCCEEEEEECHHHHHHHHCHHHHHHCCCCEEECCCCCCHHHHHHHCCCHHHHHHH IGGHKQGGDSS HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9722542; 9384377 [H]