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The map label for this gene is yqfA [C]

Identifier: 229916552

GI number: 229916552

Start: 777013

End: 777684

Strand: Reverse

Name: yqfA [C]

Synonym: EAT1b_0823

Alternate gene names: 229916552

Gene position: 777684-777013 (Counterclockwise)

Preceding gene: 229916553

Following gene: 229916551

Centisome position: 25.92

GC content: 54.17

Gene sequence:

>672_bases
ATGAAACAAGAGCAACTCAAAGAGATGCTCCATGCCGACACGCTCGGGGAAGAGATTGCGAGCGCGGTCACGCACGGCCT
GGGAGTCATCTTCAGCATCGTCGCCCTCGTCTTGCTCGTCATGAGCGCGACAGAGAGTGGGAGCACATGGAACGTCACGG
CGGTCAGTGTGTTCGGGGCATCGATGATTTTACTCTATCTTTTCTCGACACTCATGCACGCCATTCCGCATCCACGGGCG
AAGCGGGTGTTGCAAGTGTTCGACCATGCGGGGATTTACTTACTCATCGCCGGAAGTTATACGCCGTTCGCACTCGTGAC
CCTTCACGGGACGCTCGGCTGGACGTTATTCGGGATCGTGTGGGGTGTCGCGATTCTCGGGATCGTGTGGAAACTGTTTT
CGACCGGAAAGTACATGTGGGTGTCCAATGTGACATACCTCGCACTTGGCTGGATCTGCATCATCGCCATCCGTCCGTTG
TATGAATCACTCGGTCATCAAGGGTTCATGCTTCTCCTCGCAGGGGGGATTGCCTATTCGGTCGGCATCGTGTTTTACGT
GTGGCAAAAACTGCCGTTCAACCATGCCATTTGGCACTTGTTCGTCCTAGCGGGAAGCGTGTTCATCTTCCTCAGTATTT
TACTCTATGTCGCACCTTCGACAAGCCTATAA

Upstream 100 bases:

>100_bases
CATAATCTCGACACGGGCTAATCGGTAGCCCGTGTTTTTGATTGCGTTCAAATCGGGAAATGTCCATACTAGAAGGAACA
GTTACGGAAGGTGGGAGCAC

Downstream 100 bases:

>100_bases
GACAGCCGTCCTACGGGGCGTCTGTCTTTTTTGAAAAGTTGGGAAGAAAGTGCTGCAAACGGTTACAAAAATACAGACGA
AATGACGTTTGTGTGTCATA

Product: channel protein, hemolysin III family

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKQEQLKEMLHADTLGEEIASAVTHGLGVIFSIVALVLLVMSATESGSTWNVTAVSVFGASMILLYLFSTLMHAIPHPRA
KRVLQVFDHAGIYLLIAGSYTPFALVTLHGTLGWTLFGIVWGVAILGIVWKLFSTGKYMWVSNVTYLALGWICIIAIRPL
YESLGHQGFMLLLAGGIAYSVGIVFYVWQKLPFNHAIWHLFVLAGSVFIFLSILLYVAPSTSL

Sequences:

>Translated_223_residues
MKQEQLKEMLHADTLGEEIASAVTHGLGVIFSIVALVLLVMSATESGSTWNVTAVSVFGASMILLYLFSTLMHAIPHPRA
KRVLQVFDHAGIYLLIAGSYTPFALVTLHGTLGWTLFGIVWGVAILGIVWKLFSTGKYMWVSNVTYLALGWICIIAIRPL
YESLGHQGFMLLLAGGIAYSVGIVFYVWQKLPFNHAIWHLFVLAGSVFIFLSILLYVAPSTSL
>Mature_223_residues
MKQEQLKEMLHADTLGEEIASAVTHGLGVIFSIVALVLLVMSATESGSTWNVTAVSVFGASMILLYLFSTLMHAIPHPRA
KRVLQVFDHAGIYLLIAGSYTPFALVTLHGTLGWTLFGIVWGVAILGIVWKLFSTGKYMWVSNVTYLALGWICIIAIRPL
YESLGHQGFMLLLAGGIAYSVGIVFYVWQKLPFNHAIWHLFVLAGSVFIFLSILLYVAPSTSL

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=228, Percent_Identity=27.6315789473684, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI52630445, Length=229, Percent_Identity=25.764192139738, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI154759277, Length=252, Percent_Identity=25.7936507936508, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1789266, Length=208, Percent_Identity=49.5192307692308, Blast_Score=193, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI71996356, Length=202, Percent_Identity=29.2079207920792, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24640324, Length=232, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24490; Mature: 24490

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEQLKEMLHADTLGEEIASAVTHGLGVIFSIVALVLLVMSATESGSTWNVTAVSVFGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHH
SMILLYLFSTLMHAIPHPRAKRVLQVFDHAGIYLLIAGSYTPFALVTLHGTLGWTLFGIV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHH
WGVAILGIVWKLFSTGKYMWVSNVTYLALGWICIIAIRPLYESLGHQGFMLLLAGGIAYS
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VGIVFYVWQKLPFNHAIWHLFVLAGSVFIFLSILLYVAPSTSL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKQEQLKEMLHADTLGEEIASAVTHGLGVIFSIVALVLLVMSATESGSTWNVTAVSVFGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHH
SMILLYLFSTLMHAIPHPRAKRVLQVFDHAGIYLLIAGSYTPFALVTLHGTLGWTLFGIV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHH
WGVAILGIVWKLFSTGKYMWVSNVTYLALGWICIIAIRPLYESLGHQGFMLLLAGGIAYS
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VGIVFYVWQKLPFNHAIWHLFVLAGSVFIFLSILLYVAPSTSL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]