| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yflA [H]
Identifier: 229916525
GI number: 229916525
Start: 749361
End: 750743
Strand: Direct
Name: yflA [H]
Synonym: EAT1b_0795
Alternate gene names: 229916525
Gene position: 749361-750743 (Clockwise)
Preceding gene: 229916516
Following gene: 229916540
Centisome position: 24.98
GC content: 52.35
Gene sequence:
>1383_bases ATGAATGATATTATTAATCTTGTCACGAAGGTCTCCGACTGGCTTTGGGGCGTGCCGATTATCTCGTTACTCGTCTTGTC CGGTATCTTTCTCACCATCAAGCTCGGTTTCTTTCAGTTTCGTTACCCCATCTACATATTCAAGCAAACGTTCGGCAGTA TCTTCAAAAAGCCGAAAGGTGAAGGTGATATCAGTCCGAGACAAGCGTTGACATCAGCCCTCTCTTCAACAGTCGGGGCC GCGAACATCATCGGTGTACCTGCAGCGATCATGTTCGGGGGACCGGGTGCCATCTTCTGGATGTGGGTCATCGCTATCAT CGGCATGGCCATCAAGTTTTCAGAGAGTGTGCTGGCCGTCCACTACCGTGAAAAAAATGACGCTGGCGAATTTGTCGGGG GACCGGTCTACTACATATCAAAAGGACTCCGTTGGAAATGGCTCGCGACCTGGTTCGCCTTCGCCCTCATGATCGAACTC ATTCCGAGTATCATGGTACAAGGGAACGCCGTCAGCTCGGCAGTCCGTGAGACGTTCAATGGGAACACGCTCATCACCGG TATCGTCGTCGCTATTCTTGTTGGCATCATCGTCTTTGGTGGACTGAAGCGCATCGCGAAAGTCACGGAGATCGTCGTTC CTGGCATGGCACTCGTCTATGTCGGAGCCGGAATCGTCATCGTCTTGATGAACTTCTCTGAGATTCCAAACGTGCTCAGT CTCATCTTCTCGTATGCGTTCGAGCCGATGGCCGCGTTCGGAGGATTTGCCGGAGCTGCCGTCGCCGAGACGATTCGTTG GGGCTTCGCCCGTGGACTCTATTCTAACGAAGCGGGTCTTGGAACTGCACCGATTGCCCACGCCGCTGCACAAACGGATC ACCCAGTGCGCCAAGGATTCTGGGCGGTCATCGGTATCGTCATCGATACGCTCATCATTTGTAGCACGACCGCCTTCGTC GTCTTGTCTTCCGGTGTGTGGACGGCAGACGGAGCGATGGATGACCCAGCGGCGTTGACGACGATCGCCTTCCGTGAATA CTTCGGTTACACGGGAAGCTTACTCGTCACCATCTCGCTCATCTTCTTCGTTCTCTCAACCATTATCGTCATCATCTTTT ACGGCTCGCGACAAGCCGAGTACTTGTTCGGTTTGACGGCAGGGAAAATCATGAAGGCCGTCTATATCGTTTCGATTGTC ATCGGTGCAATCGGAGGCGCCCAAATGATTTGGAACTTCCTCGACTTGATGCTCGCGATGATCCTCATCCCGAACATGAT TGCCGTCCTGCTTCTAAGTGGTGAAGTGAAACGATTGACGACCGAATTCTTCACATCCGAGAAGTACTATAAGAAAGATA TCGCCGAAGAAGAGGCGTCTTAA
Upstream 100 bases:
>100_bases ACTCTCATTCTATTTTCCTCCTTTATTTTGTCAAAGATGTTTAGAGGTCCTTACTTTAGGAAACAGTATTTAAGTAAAAT AATGGAATTGGAGTGGTTAT
Downstream 100 bases:
>100_bases CCAACAATCCGACTGCTTAGGCAGTCGGATCTTTTTTAGGATGCAGGTTCGACTTTCTCGATTCCCGCCTTGATGGCTTG TACCGAGGCGTCAAACTTCT
Product: amino acid carrier protein
Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MNDIINLVTKVSDWLWGVPIISLLVLSGIFLTIKLGFFQFRYPIYIFKQTFGSIFKKPKGEGDISPRQALTSALSSTVGA ANIIGVPAAIMFGGPGAIFWMWVIAIIGMAIKFSESVLAVHYREKNDAGEFVGGPVYYISKGLRWKWLATWFAFALMIEL IPSIMVQGNAVSSAVRETFNGNTLITGIVVAILVGIIVFGGLKRIAKVTEIVVPGMALVYVGAGIVIVLMNFSEIPNVLS LIFSYAFEPMAAFGGFAGAAVAETIRWGFARGLYSNEAGLGTAPIAHAAAQTDHPVRQGFWAVIGIVIDTLIICSTTAFV VLSSGVWTADGAMDDPAALTTIAFREYFGYTGSLLVTISLIFFVLSTIIVIIFYGSRQAEYLFGLTAGKIMKAVYIVSIV IGAIGGAQMIWNFLDLMLAMILIPNMIAVLLLSGEVKRLTTEFFTSEKYYKKDIAEEEAS
Sequences:
>Translated_460_residues MNDIINLVTKVSDWLWGVPIISLLVLSGIFLTIKLGFFQFRYPIYIFKQTFGSIFKKPKGEGDISPRQALTSALSSTVGA ANIIGVPAAIMFGGPGAIFWMWVIAIIGMAIKFSESVLAVHYREKNDAGEFVGGPVYYISKGLRWKWLATWFAFALMIEL IPSIMVQGNAVSSAVRETFNGNTLITGIVVAILVGIIVFGGLKRIAKVTEIVVPGMALVYVGAGIVIVLMNFSEIPNVLS LIFSYAFEPMAAFGGFAGAAVAETIRWGFARGLYSNEAGLGTAPIAHAAAQTDHPVRQGFWAVIGIVIDTLIICSTTAFV VLSSGVWTADGAMDDPAALTTIAFREYFGYTGSLLVTISLIFFVLSTIIVIIFYGSRQAEYLFGLTAGKIMKAVYIVSIV IGAIGGAQMIWNFLDLMLAMILIPNMIAVLLLSGEVKRLTTEFFTSEKYYKKDIAEEEAS >Mature_460_residues MNDIINLVTKVSDWLWGVPIISLLVLSGIFLTIKLGFFQFRYPIYIFKQTFGSIFKKPKGEGDISPRQALTSALSSTVGA ANIIGVPAAIMFGGPGAIFWMWVIAIIGMAIKFSESVLAVHYREKNDAGEFVGGPVYYISKGLRWKWLATWFAFALMIEL IPSIMVQGNAVSSAVRETFNGNTLITGIVVAILVGIIVFGGLKRIAKVTEIVVPGMALVYVGAGIVIVLMNFSEIPNVLS LIFSYAFEPMAAFGGFAGAAVAETIRWGFARGLYSNEAGLGTAPIAHAAAQTDHPVRQGFWAVIGIVIDTLIICSTTAFV VLSSGVWTADGAMDDPAALTTIAFREYFGYTGSLLVTISLIFFVLSTIIVIIFYGSRQAEYLFGLTAGKIMKAVYIVSIV IGAIGGAQMIWNFLDLMLAMILIPNMIAVLLLSGEVKRLTTEFFTSEKYYKKDIAEEEAS
Specific function: Unknown
COG id: COG1115
COG function: function code E; Na+/alanine symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]
Homologues:
Organism=Escherichia coli, GI1786188, Length=457, Percent_Identity=36.3238512035011, Blast_Score=234, Evalue=7e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001463 [H]
Pfam domain/function: PF01235 Na_Ala_symp [H]
EC number: NA
Molecular weight: Translated: 49774; Mature: 49774
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS00873 NA_ALANINE_SYMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIINLVTKVSDWLWGVPIISLLVLSGIFLTIKLGFFQFRYPIYIFKQTFGSIFKKPKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EGDISPRQALTSALSSTVGAANIIGVPAAIMFGGPGAIFWMWVIAIIGMAIKFSESVLAV CCCCCHHHHHHHHHHHHCCCHHHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHCCCEEEE HYREKNDAGEFVGGPVYYISKGLRWKWLATWFAFALMIELIPSIMVQGNAVSSAVRETFN EEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC GNTLITGIVVAILVGIIVFGGLKRIAKVTEIVVPGMALVYVGAGIVIVLMNFSEIPNVLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCHHHHHHHHH LIFSYAFEPMAAFGGFAGAAVAETIRWGFARGLYSNEAGLGTAPIAHAAAQTDHPVRQGF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHH WAVIGIVIDTLIICSTTAFVVLSSGVWTADGAMDDPAALTTIAFREYFGYTGSLLVTISL HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH IFFVLSTIIVIIFYGSRQAEYLFGLTAGKIMKAVYIVSIVIGAIGGAQMIWNFLDLMLAM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILIPNMIAVLLLSGEVKRLTTEFFTSEKYYKKDIAEEEAS HHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHCCCC >Mature Secondary Structure MNDIINLVTKVSDWLWGVPIISLLVLSGIFLTIKLGFFQFRYPIYIFKQTFGSIFKKPKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EGDISPRQALTSALSSTVGAANIIGVPAAIMFGGPGAIFWMWVIAIIGMAIKFSESVLAV CCCCCHHHHHHHHHHHHCCCHHHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHCCCEEEE HYREKNDAGEFVGGPVYYISKGLRWKWLATWFAFALMIELIPSIMVQGNAVSSAVRETFN EEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC GNTLITGIVVAILVGIIVFGGLKRIAKVTEIVVPGMALVYVGAGIVIVLMNFSEIPNVLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCHHHHHHHHH LIFSYAFEPMAAFGGFAGAAVAETIRWGFARGLYSNEAGLGTAPIAHAAAQTDHPVRQGF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHH WAVIGIVIDTLIICSTTAFVVLSSGVWTADGAMDDPAALTTIAFREYFGYTGSLLVTISL HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH IFFVLSTIIVIIFYGSRQAEYLFGLTAGKIMKAVYIVSIVIGAIGGAQMIWNFLDLMLAM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILIPNMIAVLLLSGEVKRLTTEFFTSEKYYKKDIAEEEAS HHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]