The gene/protein map for NC_012673 is currently unavailable.
Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yunD [H]

Identifier: 229916520

GI number: 229916520

Start: 743973

End: 745319

Strand: Reverse

Name: yunD [H]

Synonym: EAT1b_0790

Alternate gene names: 229916520

Gene position: 745319-743973 (Counterclockwise)

Preceding gene: 229916521

Following gene: 229916519

Centisome position: 24.84

GC content: 51.45

Gene sequence:

>1347_bases
ATGGCCATGACGACACTGACTATTTTTCATTACAACGATCTTCATTCAAAGTTCGACCAATGGCCGAAACTTGTTTCATT
TCTAGAAGAACATCGGACGGACGACACGCTGTACTTTGATTTAGGGGATCATGCCGACCGTACCCATCCGGCGACGGAAG
TGACACGTGGGAAGTTGAATGTTCGTTTGCTCGAGCGACTTCGTCCGACAGCCGTCACCATCGGGAACAACGAAGGGATT
ACCTTTCCTCATGATTGGCTGGCCGAACTGTATGACGAAGCGACATTTCCTATCTTACTTGGGAATGTATATGAAGCAGA
CGGGTCACGACCGAATTGGGTCGATGAGACGCTCGTTCTCGAGCAAGATGGGTTCCACATCGGCCTGTTTGGTGTGACCG
CTCCATATGAAGAGTTATACCCAGAGCTCGGCTGGCAGATTGAATCGCCTTACGAGGCGGCGGAGCGAGCGTTGAAACAG
TTGGCGCATTGTGATGTCATCATCGCGCTCAGTCACCTTGGGTTCTTTGGAGATGAGCGATTAGCTGAAAGGTTTCCTGA
AATCGACGTCATTCTCGGTGCGCATACACATCACGTCTTAGATGAAGGTGTGATGACGAACGGTGTGTTGATTGCACAAG
CCGGAAAGTATGGGAAGTACGTCGGAGAAGTCACACTGACGCTTGGCGAGTCAGGAGTCGTATCGAAAGAAGCGCGCCTT
CATGAACTGTCTCAGCAATCGGATAGTCCGGACACATTGGCCTTGTTGCATACAGAAGGGGCAGATGCCGAACGCCTTCT
TGATGTCACGATTGCGGAGACGGATGGATACACCTCTGATTGGTTCGGACCTTCTCCACTGGGTGACCTGCTCGTTGAAG
GCATGGTCGAATGGTGTGCGGCGGATGTGGGGATCATCCCATCTGGCGTTGTGCTAGAAGGACTTGCACCGGGTGGGGTG
ACGCTCAACATGTTGCATCGGATCTGTCCGCATCCAATCAATCCTTGTGTGCTGACATTGGACGGGGAGACGTTGGCGCG
TTTCCTTCACGATGCCAATGAAGAAACGTTCACGACTATGCATGTCAGAGGTCTCGGCTTCAGAGGTACCGTTCTCGGAG
AACCGAGTCTCTATCAAATCGAACAGCGGGACGGTCAGACATATGTAATGGGGGAACGATTGGATTTAAATCGGACATAT
CGCGTCGCGACGGTCGATATGTTGACGTTCGGTCCGCTCCTTCCTTATTTGGCAGACCAACCGAAGCGATATTTCATGCC
CGAACTTCTGCGGGATGTATTACGAGAAACAATCGTCGCCCGTCATGAAGTGATTCGAAAAGGATAG

Upstream 100 bases:

>100_bases
GGCCGGGGATGCGGCACCGAATGCGAAGCGACTCATTGAGATCCTTGGCCTCGAGTATGAACTCGCACCGAGACAAATCA
GTTTGTTTTAGAAGGAAGGG

Downstream 100 bases:

>100_bases
AGCGCATCGACGGGGGCATGCTATGATAACAGAGTGGAGGTGGGAACGATGATTCGAGTGAATCGCCACGGATATACCGT
CGTGGAAGAAAAGCGGGACG

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MAMTTLTIFHYNDLHSKFDQWPKLVSFLEEHRTDDTLYFDLGDHADRTHPATEVTRGKLNVRLLERLRPTAVTIGNNEGI
TFPHDWLAELYDEATFPILLGNVYEADGSRPNWVDETLVLEQDGFHIGLFGVTAPYEELYPELGWQIESPYEAAERALKQ
LAHCDVIIALSHLGFFGDERLAERFPEIDVILGAHTHHVLDEGVMTNGVLIAQAGKYGKYVGEVTLTLGESGVVSKEARL
HELSQQSDSPDTLALLHTEGADAERLLDVTIAETDGYTSDWFGPSPLGDLLVEGMVEWCAADVGIIPSGVVLEGLAPGGV
TLNMLHRICPHPINPCVLTLDGETLARFLHDANEETFTTMHVRGLGFRGTVLGEPSLYQIEQRDGQTYVMGERLDLNRTY
RVATVDMLTFGPLLPYLADQPKRYFMPELLRDVLRETIVARHEVIRKG

Sequences:

>Translated_448_residues
MAMTTLTIFHYNDLHSKFDQWPKLVSFLEEHRTDDTLYFDLGDHADRTHPATEVTRGKLNVRLLERLRPTAVTIGNNEGI
TFPHDWLAELYDEATFPILLGNVYEADGSRPNWVDETLVLEQDGFHIGLFGVTAPYEELYPELGWQIESPYEAAERALKQ
LAHCDVIIALSHLGFFGDERLAERFPEIDVILGAHTHHVLDEGVMTNGVLIAQAGKYGKYVGEVTLTLGESGVVSKEARL
HELSQQSDSPDTLALLHTEGADAERLLDVTIAETDGYTSDWFGPSPLGDLLVEGMVEWCAADVGIIPSGVVLEGLAPGGV
TLNMLHRICPHPINPCVLTLDGETLARFLHDANEETFTTMHVRGLGFRGTVLGEPSLYQIEQRDGQTYVMGERLDLNRTY
RVATVDMLTFGPLLPYLADQPKRYFMPELLRDVLRETIVARHEVIRKG
>Mature_447_residues
AMTTLTIFHYNDLHSKFDQWPKLVSFLEEHRTDDTLYFDLGDHADRTHPATEVTRGKLNVRLLERLRPTAVTIGNNEGIT
FPHDWLAELYDEATFPILLGNVYEADGSRPNWVDETLVLEQDGFHIGLFGVTAPYEELYPELGWQIESPYEAAERALKQL
AHCDVIIALSHLGFFGDERLAERFPEIDVILGAHTHHVLDEGVMTNGVLIAQAGKYGKYVGEVTLTLGESGVVSKEARLH
ELSQQSDSPDTLALLHTEGADAERLLDVTIAETDGYTSDWFGPSPLGDLLVEGMVEWCAADVGIIPSGVVLEGLAPGGVT
LNMLHRICPHPINPCVLTLDGETLARFLHDANEETFTTMHVRGLGFRGTVLGEPSLYQIEQRDGQTYVMGERLDLNRTYR
VATVDMLTFGPLLPYLADQPKRYFMPELLRDVLRETIVARHEVIRKG

Specific function: Unknown

COG id: COG0737

COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

Organism=Drosophila melanogaster, GI28573524, Length=441, Percent_Identity=24.9433106575964, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI19922446, Length=427, Percent_Identity=22.248243559719, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24654424, Length=427, Percent_Identity=22.248243559719, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI19922444, Length=287, Percent_Identity=24.390243902439, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008334
- InterPro:   IPR006179
- InterPro:   IPR011240 [H]

Pfam domain/function: PF02872 5_nucleotid_C [H]

EC number: NA

Molecular weight: Translated: 50057; Mature: 49926

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMTTLTIFHYNDLHSKFDQWPKLVSFLEEHRTDDTLYFDLGDHADRTHPATEVTRGKLN
CCEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCHH
VRLLERLRPTAVTIGNNEGITFPHDWLAELYDEATFPILLGNVYEADGSRPNWVDETLVL
HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCEEECCCCCCCCCCCEEEE
EQDGFHIGLFGVTAPYEELYPELGWQIESPYEAAERALKQLAHCDVIIALSHLGFFGDER
ECCCCEEEEEECCCCHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LAERFPEIDVILGAHTHHVLDEGVMTNGVLIAQAGKYGKYVGEVTLTLGESGVVSKEARL
HHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCHHHHH
HELSQQSDSPDTLALLHTEGADAERLLDVTIAETDGYTSDWFGPSPLGDLLVEGMVEWCA
HHHHHCCCCCCEEEEEEECCCCHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
ADVGIIPSGVVLEGLAPGGVTLNMLHRICPHPINPCVLTLDGETLARFLHDANEETFTTM
HCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCEEEEE
HVRGLGFRGTVLGEPSLYQIEQRDGQTYVMGERLDLNRTYRVATVDMLTFGPLLPYLADQ
EEECCCCCCEEECCCCEEEEECCCCCEEEEECEECCCCEEEEEEEHHHHHHHHHHHHCCC
PKRYFMPELLRDVLRETIVARHEVIRKG
CHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AMTTLTIFHYNDLHSKFDQWPKLVSFLEEHRTDDTLYFDLGDHADRTHPATEVTRGKLN
CEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCHH
VRLLERLRPTAVTIGNNEGITFPHDWLAELYDEATFPILLGNVYEADGSRPNWVDETLVL
HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCEEECCCCCCCCCCCEEEE
EQDGFHIGLFGVTAPYEELYPELGWQIESPYEAAERALKQLAHCDVIIALSHLGFFGDER
ECCCCEEEEEECCCCHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LAERFPEIDVILGAHTHHVLDEGVMTNGVLIAQAGKYGKYVGEVTLTLGESGVVSKEARL
HHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCHHHHH
HELSQQSDSPDTLALLHTEGADAERLLDVTIAETDGYTSDWFGPSPLGDLLVEGMVEWCA
HHHHHCCCCCCEEEEEEECCCCHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
ADVGIIPSGVVLEGLAPGGVTLNMLHRICPHPINPCVLTLDGETLARFLHDANEETFTTM
HCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCEEEEE
HVRGLGFRGTVLGEPSLYQIEQRDGQTYVMGERLDLNRTYRVATVDMLTFGPLLPYLADQ
EEECCCCCCEEECCCCEEEEECCCCCEEEEECEECCCCEEEEEEEHHHHHHHHHHHHCCC
PKRYFMPELLRDVLRETIVARHEVIRKG
CHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]