| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229916508
Identifier: 229916508
GI number: 229916508
Start: 734612
End: 734848
Strand: Reverse
Name: 229916508
Synonym: EAT1b_0778
Alternate gene names: NA
Gene position: 734848-734612 (Counterclockwise)
Preceding gene: 229916511
Following gene: 229916507
Centisome position: 24.5
GC content: 48.95
Gene sequence:
>237_bases ATGATGAATCCAATCATCGAATTTTGTGCCTCGAATTTGGCGATGGGCTCACAAATTGCCCGGGCTAAATTAGAATCCGA TCCGGACCTTGATGTGGTCGAATACGGCTGTACAGGCTACTGTGGTGTCTGCTCCCTCGATCTCTTTTGCCTCGTTGACG GGGAAGTCGTGACGGGTGAAACACCAGAAGAGCTCGTGACGAAGGTGTATGAAAAAATCGAAGAGATGGCATGGTAA
Upstream 100 bases:
>100_bases ATAATAATCCCCCTTTGTTACTCTTCAACTGTATCATGTTATAATCTGCCGTAGAAGAACCATTTTCCGATAATTCACGT AAAGAAAGACGGTGACATAT
Downstream 100 bases:
>100_bases AAAGTTTGAGGGATGACCTCAAACTTTTTTATTTCACCCGTTGCATTTTAAAAAGAGGGATGTTATATTCTAAGAGGTTC GAATGTAGGTTGTCTGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MMNPIIEFCASNLAMGSQIARAKLESDPDLDVVEYGCTGYCGVCSLDLFCLVDGEVVTGETPEELVTKVYEKIEEMAW
Sequences:
>Translated_78_residues MMNPIIEFCASNLAMGSQIARAKLESDPDLDVVEYGCTGYCGVCSLDLFCLVDGEVVTGETPEELVTKVYEKIEEMAW >Mature_78_residues MMNPIIEFCASNLAMGSQIARAKLESDPDLDVVEYGCTGYCGVCSLDLFCLVDGEVVTGETPEELVTKVYEKIEEMAW
Specific function: Unknown
COG id: COG4844
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0349 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022916 - InterPro: IPR009910 [H]
Pfam domain/function: PF07293 DUF1450 [H]
EC number: NA
Molecular weight: Translated: 8572; Mature: 8572
Theoretical pI: Translated: 3.66; Mature: 3.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNPIIEFCASNLAMGSQIARAKLESDPDLDVVEYGCTGYCGVCSLDLFCLVDGEVVTGE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHEEECCEEECCC TPEELVTKVYEKIEEMAW CHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMNPIIEFCASNLAMGSQIARAKLESDPDLDVVEYGCTGYCGVCSLDLFCLVDGEVVTGE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHEEECCEEECCC TPEELVTKVYEKIEEMAW CHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA