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The map label for this gene is glcT [H]

Identifier: 229916498

GI number: 229916498

Start: 726023

End: 726868

Strand: Reverse

Name: glcT [H]

Synonym: EAT1b_0768

Alternate gene names: 229916498

Gene position: 726868-726023 (Counterclockwise)

Preceding gene: 229916499

Following gene: 229916497

Centisome position: 24.23

GC content: 47.4

Gene sequence:

>846_bases
ATGACATTACCGATGTATACGATCAAAAAAGTGTTGAATAATAGCGTTGTCATTTGTCAACATGATACGGATCCGGAAGT
CATTCTACTCGGGAAGGGGATTGGCTTTGGCAAAAAACCAGGCGACCTCGTCGACCCGGCCAGCGTCCCGGAGAAAGTGT
ATCAACTGACAGATAAAGAAGAGCAATCTCAATATCAAGAACTCGTCAAACATGTCGACGAGGACTTCATTGCGTTCATG
CAAGAGATTGTCGGCTTCATTGAAACGAGTACGGGCAAGAAAGTCGATGAGCACATCCATATCGGCTTGACCGACCACTT
GTTCTTTACGATGAAGCGAATCGAACAAGGGATGGAAGTGACGAATCCGTTTTTACTTGAAACGGAATCGCTCTATCCAA
ACGAGTTTGCGCTCGCGGAACGAATCGTCGATATGTTCCATGAACGATTGAACGTTTTGCTCCCAGATGCGGAGACTGGA
TTCATTGCCCTTCATATCCACTCGGCGACGACGTTCAAAAACGTCCTCGAGGTCAACCGTCATAATCAAATCATCGGGCA
AATTGTGCAGACGATTGAGAGTCGTTTGAACGTGAAAATGGACCGAACGTCACTCGATTATAAGCGCTTACTTCGGCACT
TAAGGTACGCCGTTGAGCGGGTTGCGACGGGTGAGACAGTCGAGGCACCACAAAAAATTGAAAAGGTGTTGCGCGACGAA
TATCCGCTATGCTATAGTACTGCTTGGGAGCTGATGGGCATCATGGAACGCGAATTAAAGCGTCCTGTCCCACGAGGTGA
AGCGACATATTTGACGATGCATCTCCAGCGCCTAACAAGTAGATAA

Upstream 100 bases:

>100_bases
CGACAGAAATGTTCGCCTTTTTTGTTTTGTCCCTACTTTTTTAGGGCATGAACCGATATACTAGATAGCGAAACGATTTT
TAGTAAGGGATGCGATGCGA

Downstream 100 bases:

>100_bases
ATGATACCACGTGTCTTACGTGTTACTGATTCGATCAGGCATGAGTAAGGAGTGGAACGTTATGTGATGTCTCCATTGGG
AGAGGTCTACGTTCTATCCT

Product: transcriptional antiterminator, BglG

Products: NA

Alternate protein names: RNA-binding antitermination protein GlcT [H]

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTLPMYTIKKVLNNSVVICQHDTDPEVILLGKGIGFGKKPGDLVDPASVPEKVYQLTDKEEQSQYQELVKHVDEDFIAFM
QEIVGFIETSTGKKVDEHIHIGLTDHLFFTMKRIEQGMEVTNPFLLETESLYPNEFALAERIVDMFHERLNVLLPDAETG
FIALHIHSATTFKNVLEVNRHNQIIGQIVQTIESRLNVKMDRTSLDYKRLLRHLRYAVERVATGETVEAPQKIEKVLRDE
YPLCYSTAWELMGIMERELKRPVPRGEATYLTMHLQRLTSR

Sequences:

>Translated_281_residues
MTLPMYTIKKVLNNSVVICQHDTDPEVILLGKGIGFGKKPGDLVDPASVPEKVYQLTDKEEQSQYQELVKHVDEDFIAFM
QEIVGFIETSTGKKVDEHIHIGLTDHLFFTMKRIEQGMEVTNPFLLETESLYPNEFALAERIVDMFHERLNVLLPDAETG
FIALHIHSATTFKNVLEVNRHNQIIGQIVQTIESRLNVKMDRTSLDYKRLLRHLRYAVERVATGETVEAPQKIEKVLRDE
YPLCYSTAWELMGIMERELKRPVPRGEATYLTMHLQRLTSR
>Mature_280_residues
TLPMYTIKKVLNNSVVICQHDTDPEVILLGKGIGFGKKPGDLVDPASVPEKVYQLTDKEEQSQYQELVKHVDEDFIAFMQ
EIVGFIETSTGKKVDEHIHIGLTDHLFFTMKRIEQGMEVTNPFLLETESLYPNEFALAERIVDMFHERLNVLLPDAETGF
IALHIHSATTFKNVLEVNRHNQIIGQIVQTIESRLNVKMDRTSLDYKRLLRHLRYAVERVATGETVEAPQKIEKVLRDEY
PLCYSTAWELMGIMERELKRPVPRGEATYLTMHLQRLTSR

Specific function: Mediates the positive regulation of the glucose PTS operon (ptsGHI) by functioning as an antiterminator factor of transcription via its interaction with the RNA-antiterminator (RAT) sequence located upstream of the ptsG gene. The RNA-binding domain of Glc

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI1790160, Length=272, Percent_Identity=29.7794117647059, Blast_Score=152, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550 [H]

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 32424; Mature: 32293

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPMYTIKKVLNNSVVICQHDTDPEVILLGKGIGFGKKPGDLVDPASVPEKVYQLTDKE
CCCCHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHH
EQSQYQELVKHVDEDFIAFMQEIVGFIETSTGKKVDEHIHIGLTDHLFFTMKRIEQGMEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCHHHHHHHHHHHHHCHHH
TNPFLLETESLYPNEFALAERIVDMFHERLNVLLPDAETGFIALHIHSATTFKNVLEVNR
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECHHHHHHHHHHHH
HNQIIGQIVQTIESRLNVKMDRTSLDYKRLLRHLRYAVERVATGETVEAPQKIEKVLRDE
HHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
YPLCYSTAWELMGIMERELKRPVPRGEATYLTMHLQRLTSR
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLPMYTIKKVLNNSVVICQHDTDPEVILLGKGIGFGKKPGDLVDPASVPEKVYQLTDKE
CCCHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHH
EQSQYQELVKHVDEDFIAFMQEIVGFIETSTGKKVDEHIHIGLTDHLFFTMKRIEQGMEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCHHHHHHHHHHHHHCHHH
TNPFLLETESLYPNEFALAERIVDMFHERLNVLLPDAETGFIALHIHSATTFKNVLEVNR
CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECHHHHHHHHHHHH
HNQIIGQIVQTIESRLNVKMDRTSLDYKRLLRHLRYAVERVATGETVEAPQKIEKVLRDE
HHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
YPLCYSTAWELMGIMERELKRPVPRGEATYLTMHLQRLTSR
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11902727; 9384377 [H]