| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is yugG [H]
Identifier: 229916482
GI number: 229916482
Start: 706624
End: 707118
Strand: Reverse
Name: yugG [H]
Synonym: EAT1b_0752
Alternate gene names: 229916482
Gene position: 707118-706624 (Counterclockwise)
Preceding gene: 229916483
Following gene: 229916481
Centisome position: 23.57
GC content: 47.07
Gene sequence:
>495_bases ATGTATTCATCAAAAGAACTTGAGTTGTTAGAGCTGTTAGAAGAAAAAGGGTATCTCGAGACGAAGATGTTGGCTGATTT GTTGGCACTCGATGAGGAGACGATTGAGTCGATGCTTGAGAAATTCAAGCAAGACGGGATTCTCCTCGGATTTCGTGCCA TGGTCAATTGGCAAAAAATCAATCGTCACGATGTCACTGCCTTCATTGACGTTAAAGTCACTCCGAAACGAGGACGCGGA TTTGACGACGTGGCCGAGCGTATTTATCGTTTCCCAGAAGTGACGGCGCTTTATTTGATGTCGGGGGCGTATGACCTTCA AGTCGTCATTCGGGCGAACTCGCTTCAAGACGTCGCCTCATTTGTCTCAGACAAGCTATCGCCGCTTGATTCGGTCTTGT CGACGACAACCCACTTCAAATTGAAGACGTACAAACATGACGGGATCTTGTTCACCCCACAAACTGAAGATAAGCGGTTG AACATCACGCCATGA
Upstream 100 bases:
>100_bases AGAATTTCCATATCGTTCAGGAGGAACGACGTGCATTCGTGAGACAGACAGAGAGAACGTTCACAGGCGTGCTACCTGGT CGAACGGAAGGAGAATAAGT
Downstream 100 bases:
>100_bases AGTCTTTATCGAATCAAGTCGTCTCGATGAAGCCATCGGGCATTCGCCGTTTCTTTGACTTAGCACAGACGATGGATAAC GTGGTCTCTCTCGGGGTGGG
Product: AsnC family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MYSSKELELLELLEEKGYLETKMLADLLALDEETIESMLEKFKQDGILLGFRAMVNWQKINRHDVTAFIDVKVTPKRGRG FDDVAERIYRFPEVTALYLMSGAYDLQVVIRANSLQDVASFVSDKLSPLDSVLSTTTHFKLKTYKHDGILFTPQTEDKRL NITP
Sequences:
>Translated_164_residues MYSSKELELLELLEEKGYLETKMLADLLALDEETIESMLEKFKQDGILLGFRAMVNWQKINRHDVTAFIDVKVTPKRGRG FDDVAERIYRFPEVTALYLMSGAYDLQVVIRANSLQDVASFVSDKLSPLDSVLSTTTHFKLKTYKHDGILFTPQTEDKRL NITP >Mature_164_residues MYSSKELELLELLEEKGYLETKMLADLLALDEETIESMLEKFKQDGILLGFRAMVNWQKINRHDVTAFIDVKVTPKRGRG FDDVAERIYRFPEVTALYLMSGAYDLQVVIRANSLQDVASFVSDKLSPLDSVLSTTTHFKLKTYKHDGILFTPQTEDKRL NITP
Specific function: Unknown
COG id: COG1522
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR000485 - InterPro: IPR019888 - InterPro: IPR019887 - InterPro: IPR011991 [H]
Pfam domain/function: PF01037 AsnC_trans_reg [H]
EC number: NA
Molecular weight: Translated: 18823; Mature: 18823
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSSKELELLELLEEKGYLETKMLADLLALDEETIESMLEKFKQDGILLGFRAMVNWQKI CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHC NRHDVTAFIDVKVTPKRGRGFDDVAERIYRFPEVTALYLMSGAYDLQVVIRANSLQDVAS CCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEECCHHHHHH FVSDKLSPLDSVLSTTTHFKLKTYKHDGILFTPQTEDKRLNITP HHHHHCCHHHHHHHHHHHEEEEEEECCCEEECCCCCCCEEECCC >Mature Secondary Structure MYSSKELELLELLEEKGYLETKMLADLLALDEETIESMLEKFKQDGILLGFRAMVNWQKI CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHC NRHDVTAFIDVKVTPKRGRGFDDVAERIYRFPEVTALYLMSGAYDLQVVIRANSLQDVAS CCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEECCHHHHHH FVSDKLSPLDSVLSTTTHFKLKTYKHDGILFTPQTEDKRLNITP HHHHHCCHHHHHHHHHHHEEEEEEECCCEEECCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]