| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is rhbE [H]
Identifier: 229916480
GI number: 229916480
Start: 704140
End: 705384
Strand: Reverse
Name: rhbE [H]
Synonym: EAT1b_0750
Alternate gene names: 229916480
Gene position: 705384-704140 (Counterclockwise)
Preceding gene: 229916481
Following gene: 229916479
Centisome position: 23.51
GC content: 49.24
Gene sequence:
>1245_bases ATGAAACAATTTGACTTTGTTGCAATCGGGTGTGGTCCGTATAATCTTGGTCTCATGGCCCTTGCAGAGAAGACTGAACT GCATGGGGTTTGCTTTGAGCAACGTGCGGAGATGATGTGGCATGAAGGCATGTTGATTGAAGGGATGACAATGCAGACGC ATTATTTACAAGATCTCGTCACATTGGCGGACCCGACCCATCCATCGAGTTTTCTGAACTATTTGAGTGGTACGGGTCGA CTCCAAACATTTATCACGCAAGAACAAGATAAGATTCCTCGAACGGAATACAATCGTTATTTGCAGTGGGTTGTTAACCA ACTGTCGACGATTCGTTTCGGTCATTATGTATCTGACGTCCAAGCGGAAGAAGAGGGCTTTCTCGTGACCGTCGAATCGG ATGGGCAATCGACACAAGTTTATGCAAGACATCTCGTCCTAGGGACAGGGGCGGCGCCGTTCGTGCCGGATGGGTTTGAA CAAGTTATTCATACGAGCGATTATTTGACGTACCGGGACGTCCTCAAAGACCGATATCGTGTCGCGGTCGTCGGGAGTGG ACAGAGTGCTGCGGAAGTCTTCCTTGACTTGTTGCGTGAGGCGACGGATGAACAACGCGTCGACTGGCTTACACGCTCCG AACACTTTGAGTCACTTGAAGCAGGCAAGCTCGGGGATGAAATTTTTAGTGTGGATTATGTCGATTATTTTCATAAGCTA CCGTATGACGCTCGACAAGAGTTACTTGGGTCATTCGAGCGTTTCCGTCACGGTGTCAATCCTGAGACGATGACCTCGAT CTATGAGACTTTGTATCATCGGACTGCAGAAGGACAAGCGACGAAAGCTGACATGATGACACAGGTCGAAGTGGAATCAA TCACTTATGATTGGTTGACACATCGTTTGAAAGGAACGCAACGCTATACGGGAGAAGTGATTGAAAGAGAGTACGATCTC GTCGTCGTGGCGACGGGGTATCGCCCAGTGGTCCCATCTTGGGTCAATCAGCTCCCGGTCGTATGGGAAGCAGAGGGAGA ATGGGCAGTACGTGACACGTATGAAGTGATCATGAGCGAGTCGTTAGGCGGGAAGTTGTTCACGCATACGAATTTAGAGC ATTCGCATGGTCCGGCTGCGACGAATCTCGGGATGGCTGTCTATCGAAATGCGGTCATATTGAACGACATGGCTGGGGAA ACGGTCTATCCGATTCGCCATCAGAAGCCGTTTACGACATTTTAA
Upstream 100 bases:
>100_bases AAACAATTCGAAGTCACCGTACTCAAGGACTCTCATTCGTGAGAGTTCTTTGGCGTTTTAGCGATATAACGAAAGGGAAA AGATGGGCGAGGTGAAGAGG
Downstream 100 bases:
>100_bases ACAAAAAAAGGGCTAGGCGAGTCGCCTAGCGGAATCAGGGGGGAATACTTGAAGTCTTGCTTGATTTGTATTTACCCCGC ACTTCGACTTTAAAACATAC
Product: L-lysine 6-monooxygenase (NADPH)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MKQFDFVAIGCGPYNLGLMALAEKTELHGVCFEQRAEMMWHEGMLIEGMTMQTHYLQDLVTLADPTHPSSFLNYLSGTGR LQTFITQEQDKIPRTEYNRYLQWVVNQLSTIRFGHYVSDVQAEEEGFLVTVESDGQSTQVYARHLVLGTGAAPFVPDGFE QVIHTSDYLTYRDVLKDRYRVAVVGSGQSAAEVFLDLLREATDEQRVDWLTRSEHFESLEAGKLGDEIFSVDYVDYFHKL PYDARQELLGSFERFRHGVNPETMTSIYETLYHRTAEGQATKADMMTQVEVESITYDWLTHRLKGTQRYTGEVIEREYDL VVVATGYRPVVPSWVNQLPVVWEAEGEWAVRDTYEVIMSESLGGKLFTHTNLEHSHGPAATNLGMAVYRNAVILNDMAGE TVYPIRHQKPFTTF
Sequences:
>Translated_414_residues MKQFDFVAIGCGPYNLGLMALAEKTELHGVCFEQRAEMMWHEGMLIEGMTMQTHYLQDLVTLADPTHPSSFLNYLSGTGR LQTFITQEQDKIPRTEYNRYLQWVVNQLSTIRFGHYVSDVQAEEEGFLVTVESDGQSTQVYARHLVLGTGAAPFVPDGFE QVIHTSDYLTYRDVLKDRYRVAVVGSGQSAAEVFLDLLREATDEQRVDWLTRSEHFESLEAGKLGDEIFSVDYVDYFHKL PYDARQELLGSFERFRHGVNPETMTSIYETLYHRTAEGQATKADMMTQVEVESITYDWLTHRLKGTQRYTGEVIEREYDL VVVATGYRPVVPSWVNQLPVVWEAEGEWAVRDTYEVIMSESLGGKLFTHTNLEHSHGPAATNLGMAVYRNAVILNDMAGE TVYPIRHQKPFTTF >Mature_414_residues MKQFDFVAIGCGPYNLGLMALAEKTELHGVCFEQRAEMMWHEGMLIEGMTMQTHYLQDLVTLADPTHPSSFLNYLSGTGR LQTFITQEQDKIPRTEYNRYLQWVVNQLSTIRFGHYVSDVQAEEEGFLVTVESDGQSTQVYARHLVLGTGAAPFVPDGFE QVIHTSDYLTYRDVLKDRYRVAVVGSGQSAAEVFLDLLREATDEQRVDWLTRSEHFESLEAGKLGDEIFSVDYVDYFHKL PYDARQELLGSFERFRHGVNPETMTSIYETLYHRTAEGQATKADMMTQVEVESITYDWLTHRLKGTQRYTGEVIEREYDL VVVATGYRPVVPSWVNQLPVVWEAEGEWAVRDTYEVIMSESLGGKLFTHTNLEHSHGPAATNLGMAVYRNAVILNDMAGE TVYPIRHQKPFTTF
Specific function: Unknown
COG id: COG3486
COG function: function code Q; Lysine/ornithine N-monooxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47307; Mature: 47307
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFDFVAIGCGPYNLGLMALAEKTELHGVCFEQRAEMMWHEGMLIEGMTMQTHYLQDLV CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHH TLADPTHPSSFLNYLSGTGRLQTFITQEQDKIPRTEYNRYLQWVVNQLSTIRFGHYVSDV HHCCCCCHHHHHHHHCCCCHHHHHECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC QAEEEGFLVTVESDGQSTQVYARHLVLGTGAAPFVPDGFEQVIHTSDYLTYRDVLKDRYR CCCCCCEEEEEECCCCCHHHHHHHEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHCCEE VAVVGSGQSAAEVFLDLLREATDEQRVDWLTRSEHFESLEAGKLGDEIFSVDYVDYFHKL EEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC PYDARQELLGSFERFRHGVNPETMTSIYETLYHRTAEGQATKADMMTQVEVESITYDWLT CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEHHHHHHHHHHH HRLKGTQRYTGEVIEREYDLVVVATGYRPVVPSWVNQLPVVWEAEGEWAVRDTYEVIMSE HHHCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCEEEECCCCEEHHHHHHHHHHH SLGGKLFTHTNLEHSHGPAATNLGMAVYRNAVILNDMAGETVYPIRHQKPFTTF CCCCEEEEECCCCCCCCCCHHHCCHHHHHCEEEEECCCCCEECCCCCCCCCCCC >Mature Secondary Structure MKQFDFVAIGCGPYNLGLMALAEKTELHGVCFEQRAEMMWHEGMLIEGMTMQTHYLQDLV CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHH TLADPTHPSSFLNYLSGTGRLQTFITQEQDKIPRTEYNRYLQWVVNQLSTIRFGHYVSDV HHCCCCCHHHHHHHHCCCCHHHHHECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC QAEEEGFLVTVESDGQSTQVYARHLVLGTGAAPFVPDGFEQVIHTSDYLTYRDVLKDRYR CCCCCCEEEEEECCCCCHHHHHHHEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHCCEE VAVVGSGQSAAEVFLDLLREATDEQRVDWLTRSEHFESLEAGKLGDEIFSVDYVDYFHKL EEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC PYDARQELLGSFERFRHGVNPETMTSIYETLYHRTAEGQATKADMMTQVEVESITYDWLT CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEHHHHHHHHHHH HRLKGTQRYTGEVIEREYDLVVVATGYRPVVPSWVNQLPVVWEAEGEWAVRDTYEVIMSE HHHCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCEEEECCCCEEHHHHHHHHHHH SLGGKLFTHTNLEHSHGPAATNLGMAVYRNAVILNDMAGETVYPIRHQKPFTTF CCCCEEEEECCCCCCCCCCHHHCCHHHHHCEEEEECCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11274118; 11481432 [H]