| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ytgP [H]
Identifier: 229916459
GI number: 229916459
Start: 680450
End: 682147
Strand: Reverse
Name: ytgP [H]
Synonym: EAT1b_0729
Alternate gene names: 229916459
Gene position: 682147-680450 (Counterclockwise)
Preceding gene: 229916461
Following gene: 229916458
Centisome position: 22.74
GC content: 49.53
Gene sequence:
>1698_bases ATGTCATCAAGCGCCAAACAAGATTCTGGAAGAGCCTCCTTCGTCAAAGGAACGCTTCTTTTATCAGCGGGAAACTTGAT TTCCCGAATGTTAGGACTATTGTACACGTTCCCGTTCCAAGCGATGGTCGGGATTGCCGGAGTGACATTATATCAAGCGG CATATACGTATTATGCGATCATGATCTCCATTTCGACGGCAGGGATTCCCGTTGCCGTTTCGAAATTTATCGCAAAATAT AATGCACTAGGAGAATACGGGACAAGTCAACGACTGTTCCGACAAGGGATGAAGCTGATGCTTGCGACCGGTGTCGTCGC TTTTTTATTACTCTTTTTTGCGGCACCATGGTTATCCGAACTGATGGTCCGAAACTCAGAGAACAATCAGCAATACATTG ACTCGCTCACCCTCGTGACACGAAGCGTCAGTTTTGCCTTACTGCTCATCCCGGCGATGAGTATGGTACGTGGTTATTTC CAGGGACATCAAGACATGGCACCGACGGCAATCTCACAAGTGGTCGAACAGATTGTACGCATCCTGTTCCTCCTCAGTGG AACGATGCTCGTCTTGTTCGTCTTTGCGGATTCAAACTTCATTCAACCGATTGCCAATGCCCTCGGAGGGACGCAATCTG TTGAAACGACTGAATTGAACGGATTGAAAGTCATTGCCGTCACGATTGCGACGTTCAGTGCGTTCATCGGGGCAATCGGT AGTTTCGCCGTGCTCATCATGTATTGGAAACGTCGAAAAGACATTCATCGTCAGACAGAGAATCCGGCGGGCACACCGGT CCGCTCGATGAAATCGTTGTTGCTCGAATTGCTTAGCTATTCGATTCCAATCGTGATGGTCGGGGTATCGACCCCTCTCT ATCAATTGATTGACCAATTGACGATGGTCAATACGTTGCTCAGTACGGGTGCGACCGTTTCTGAAGCAACATCGGCGTAT GGATTCTTGACCGGGAACGCCCATAAAATTGTGTTGATTCCAGTCTCTGTCGCGGCGAGTGTATCGATGGCGACGATTCC GCTTGTGACTCGTTCGTTCACGACGGGGGACATGCAAAAAGTTCGAAATCAAGTAAACCATATTTTCCAAGTCTCGTTCT TCGTGACGATTCCTGCGGTCATTGGTCTCGTAGCACTTGCGGAGCCATTGTTTGGCACCTTGTTCCCGGGTGACCGTGAA GGATGGGTATACTTGTTCCACTACGCACCAAGTGCATTCTTCTTGGCCTATTACTCGGTCGCGGCTGCGATCCTCCAAGG GATCAACCGTCAGTACTTCACCATCTTTGCCACATCGATGGGACTGTTGACGAAACTTGCATTGAACGTACCGCTCGTCT ATTGGCTCGGCGGAATCGGAGCCGGGTACGCGACCATCGCTGGATACATCGTGGCCATTATTCTCATGGTATGGATGATT CAACGAACGCTCCACTTCCCGTATAAGCAACTGCTTCGTCGCACCATCTTGATGTTCTTGATGGGTGGGGCGATGTTCGC TGCCGTCTTCCTCTCTCTTCTCGTTACAATGAATGATGAGGCGAGTTGGGGGAACGACATTTTTGCGACAATCGTGGGAG TGACAATCGGCGTTCTCGTATATGGATACCTCGGCTGGCGGAGCCATCTCGCAGGTAAATTACTAGGGAAACGCTTTGAA TATCGGAGGAAAATGTAA
Upstream 100 bases:
>100_bases TCGTAACTTTATTATCCGTAACAGTAAGAGTATAATGAGAAGCGGTTGTTTTGTAAAACCGAATTCATTGAAATCGTTGA TTTATAGATGGAGGTACCTC
Downstream 100 bases:
>100_bases TGCGGATTGATAAGTTGTTAGCGAACATGGGATATGGTTCACGAAAAGACGTGAAAATCCTATTGAAACAAGGGGCGGTG CGAGTCGATGAGGCACTTGT
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MSSSAKQDSGRASFVKGTLLLSAGNLISRMLGLLYTFPFQAMVGIAGVTLYQAAYTYYAIMISISTAGIPVAVSKFIAKY NALGEYGTSQRLFRQGMKLMLATGVVAFLLLFFAAPWLSELMVRNSENNQQYIDSLTLVTRSVSFALLLIPAMSMVRGYF QGHQDMAPTAISQVVEQIVRILFLLSGTMLVLFVFADSNFIQPIANALGGTQSVETTELNGLKVIAVTIATFSAFIGAIG SFAVLIMYWKRRKDIHRQTENPAGTPVRSMKSLLLELLSYSIPIVMVGVSTPLYQLIDQLTMVNTLLSTGATVSEATSAY GFLTGNAHKIVLIPVSVAASVSMATIPLVTRSFTTGDMQKVRNQVNHIFQVSFFVTIPAVIGLVALAEPLFGTLFPGDRE GWVYLFHYAPSAFFLAYYSVAAAILQGINRQYFTIFATSMGLLTKLALNVPLVYWLGGIGAGYATIAGYIVAIILMVWMI QRTLHFPYKQLLRRTILMFLMGGAMFAAVFLSLLVTMNDEASWGNDIFATIVGVTIGVLVYGYLGWRSHLAGKLLGKRFE YRRKM
Sequences:
>Translated_565_residues MSSSAKQDSGRASFVKGTLLLSAGNLISRMLGLLYTFPFQAMVGIAGVTLYQAAYTYYAIMISISTAGIPVAVSKFIAKY NALGEYGTSQRLFRQGMKLMLATGVVAFLLLFFAAPWLSELMVRNSENNQQYIDSLTLVTRSVSFALLLIPAMSMVRGYF QGHQDMAPTAISQVVEQIVRILFLLSGTMLVLFVFADSNFIQPIANALGGTQSVETTELNGLKVIAVTIATFSAFIGAIG SFAVLIMYWKRRKDIHRQTENPAGTPVRSMKSLLLELLSYSIPIVMVGVSTPLYQLIDQLTMVNTLLSTGATVSEATSAY GFLTGNAHKIVLIPVSVAASVSMATIPLVTRSFTTGDMQKVRNQVNHIFQVSFFVTIPAVIGLVALAEPLFGTLFPGDRE GWVYLFHYAPSAFFLAYYSVAAAILQGINRQYFTIFATSMGLLTKLALNVPLVYWLGGIGAGYATIAGYIVAIILMVWMI QRTLHFPYKQLLRRTILMFLMGGAMFAAVFLSLLVTMNDEASWGNDIFATIVGVTIGVLVYGYLGWRSHLAGKLLGKRFE YRRKM >Mature_564_residues SSSAKQDSGRASFVKGTLLLSAGNLISRMLGLLYTFPFQAMVGIAGVTLYQAAYTYYAIMISISTAGIPVAVSKFIAKYN ALGEYGTSQRLFRQGMKLMLATGVVAFLLLFFAAPWLSELMVRNSENNQQYIDSLTLVTRSVSFALLLIPAMSMVRGYFQ GHQDMAPTAISQVVEQIVRILFLLSGTMLVLFVFADSNFIQPIANALGGTQSVETTELNGLKVIAVTIATFSAFIGAIGS FAVLIMYWKRRKDIHRQTENPAGTPVRSMKSLLLELLSYSIPIVMVGVSTPLYQLIDQLTMVNTLLSTGATVSEATSAYG FLTGNAHKIVLIPVSVAASVSMATIPLVTRSFTTGDMQKVRNQVNHIFQVSFFVTIPAVIGLVALAEPLFGTLFPGDREG WVYLFHYAPSAFFLAYYSVAAAILQGINRQYFTIFATSMGLLTKLALNVPLVYWLGGIGAGYATIAGYIVAIILMVWMIQ RTLHFPYKQLLRRTILMFLMGGAMFAAVFLSLLVTMNDEASWGNDIFATIVGVTIGVLVYGYLGWRSHLAGKLLGKRFEY RRKM
Specific function: May play a role in cell division, although it is not essential for growth [H]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential). Note=Localizes at the septum [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 61865; Mature: 61734
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSAKQDSGRASFVKGTLLLSAGNLISRMLGLLYTFPFQAMVGIAGVTLYQAAYTYYAI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MISISTAGIPVAVSKFIAKYNALGEYGTSQRLFRQGMKLMLATGVVAFLLLFFAAPWLSE HEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMVRNSENNQQYIDSLTLVTRSVSFALLLIPAMSMVRGYFQGHQDMAPTAISQVVEQIVR HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ILFLLSGTMLVLFVFADSNFIQPIANALGGTQSVETTELNGLKVIAVTIATFSAFIGAIG HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEECCCCEEEHHHHHHHHHHHHHHHH SFAVLIMYWKRRKDIHRQTENPAGTPVRSMKSLLLELLSYSIPIVMVGVSTPLYQLIDQL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH TMVNTLLSTGATVSEATSAYGFLTGNAHKIVLIPVSVAASVSMATIPLVTRSFTTGDMQK HHHHHHHHCCCCHHHHHHHCEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHH VRNQVNHIFQVSFFVTIPAVIGLVALAEPLFGTLFPGDREGWVYLFHYAPSAFFLAYYSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHH AAAILQGINRQYFTIFATSMGLLTKLALNVPLVYWLGGIGAGYATIAGYIVAIILMVWMI HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH QRTLHFPYKQLLRRTILMFLMGGAMFAAVFLSLLVTMNDEASWGNDIFATIVGVTIGVLV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH YGYLGWRSHLAGKLLGKRFEYRRKM HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSSAKQDSGRASFVKGTLLLSAGNLISRMLGLLYTFPFQAMVGIAGVTLYQAAYTYYAI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MISISTAGIPVAVSKFIAKYNALGEYGTSQRLFRQGMKLMLATGVVAFLLLFFAAPWLSE HEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMVRNSENNQQYIDSLTLVTRSVSFALLLIPAMSMVRGYFQGHQDMAPTAISQVVEQIVR HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ILFLLSGTMLVLFVFADSNFIQPIANALGGTQSVETTELNGLKVIAVTIATFSAFIGAIG HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEECCCCEEEHHHHHHHHHHHHHHHH SFAVLIMYWKRRKDIHRQTENPAGTPVRSMKSLLLELLSYSIPIVMVGVSTPLYQLIDQL HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH TMVNTLLSTGATVSEATSAYGFLTGNAHKIVLIPVSVAASVSMATIPLVTRSFTTGDMQK HHHHHHHHCCCCHHHHHHHCEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHH VRNQVNHIFQVSFFVTIPAVIGLVALAEPLFGTLFPGDREGWVYLFHYAPSAFFLAYYSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHH AAAILQGINRQYFTIFATSMGLLTKLALNVPLVYWLGGIGAGYATIAGYIVAIILMVWMI HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH QRTLHFPYKQLLRRTILMFLMGGAMFAAVFLSLLVTMNDEASWGNDIFATIVGVTIGVLV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH YGYLGWRSHLAGKLLGKRFEYRRKM HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]