Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is ytgP [H]

Identifier: 229916459

GI number: 229916459

Start: 680450

End: 682147

Strand: Reverse

Name: ytgP [H]

Synonym: EAT1b_0729

Alternate gene names: 229916459

Gene position: 682147-680450 (Counterclockwise)

Preceding gene: 229916461

Following gene: 229916458

Centisome position: 22.74

GC content: 49.53

Gene sequence:

>1698_bases
ATGTCATCAAGCGCCAAACAAGATTCTGGAAGAGCCTCCTTCGTCAAAGGAACGCTTCTTTTATCAGCGGGAAACTTGAT
TTCCCGAATGTTAGGACTATTGTACACGTTCCCGTTCCAAGCGATGGTCGGGATTGCCGGAGTGACATTATATCAAGCGG
CATATACGTATTATGCGATCATGATCTCCATTTCGACGGCAGGGATTCCCGTTGCCGTTTCGAAATTTATCGCAAAATAT
AATGCACTAGGAGAATACGGGACAAGTCAACGACTGTTCCGACAAGGGATGAAGCTGATGCTTGCGACCGGTGTCGTCGC
TTTTTTATTACTCTTTTTTGCGGCACCATGGTTATCCGAACTGATGGTCCGAAACTCAGAGAACAATCAGCAATACATTG
ACTCGCTCACCCTCGTGACACGAAGCGTCAGTTTTGCCTTACTGCTCATCCCGGCGATGAGTATGGTACGTGGTTATTTC
CAGGGACATCAAGACATGGCACCGACGGCAATCTCACAAGTGGTCGAACAGATTGTACGCATCCTGTTCCTCCTCAGTGG
AACGATGCTCGTCTTGTTCGTCTTTGCGGATTCAAACTTCATTCAACCGATTGCCAATGCCCTCGGAGGGACGCAATCTG
TTGAAACGACTGAATTGAACGGATTGAAAGTCATTGCCGTCACGATTGCGACGTTCAGTGCGTTCATCGGGGCAATCGGT
AGTTTCGCCGTGCTCATCATGTATTGGAAACGTCGAAAAGACATTCATCGTCAGACAGAGAATCCGGCGGGCACACCGGT
CCGCTCGATGAAATCGTTGTTGCTCGAATTGCTTAGCTATTCGATTCCAATCGTGATGGTCGGGGTATCGACCCCTCTCT
ATCAATTGATTGACCAATTGACGATGGTCAATACGTTGCTCAGTACGGGTGCGACCGTTTCTGAAGCAACATCGGCGTAT
GGATTCTTGACCGGGAACGCCCATAAAATTGTGTTGATTCCAGTCTCTGTCGCGGCGAGTGTATCGATGGCGACGATTCC
GCTTGTGACTCGTTCGTTCACGACGGGGGACATGCAAAAAGTTCGAAATCAAGTAAACCATATTTTCCAAGTCTCGTTCT
TCGTGACGATTCCTGCGGTCATTGGTCTCGTAGCACTTGCGGAGCCATTGTTTGGCACCTTGTTCCCGGGTGACCGTGAA
GGATGGGTATACTTGTTCCACTACGCACCAAGTGCATTCTTCTTGGCCTATTACTCGGTCGCGGCTGCGATCCTCCAAGG
GATCAACCGTCAGTACTTCACCATCTTTGCCACATCGATGGGACTGTTGACGAAACTTGCATTGAACGTACCGCTCGTCT
ATTGGCTCGGCGGAATCGGAGCCGGGTACGCGACCATCGCTGGATACATCGTGGCCATTATTCTCATGGTATGGATGATT
CAACGAACGCTCCACTTCCCGTATAAGCAACTGCTTCGTCGCACCATCTTGATGTTCTTGATGGGTGGGGCGATGTTCGC
TGCCGTCTTCCTCTCTCTTCTCGTTACAATGAATGATGAGGCGAGTTGGGGGAACGACATTTTTGCGACAATCGTGGGAG
TGACAATCGGCGTTCTCGTATATGGATACCTCGGCTGGCGGAGCCATCTCGCAGGTAAATTACTAGGGAAACGCTTTGAA
TATCGGAGGAAAATGTAA

Upstream 100 bases:

>100_bases
TCGTAACTTTATTATCCGTAACAGTAAGAGTATAATGAGAAGCGGTTGTTTTGTAAAACCGAATTCATTGAAATCGTTGA
TTTATAGATGGAGGTACCTC

Downstream 100 bases:

>100_bases
TGCGGATTGATAAGTTGTTAGCGAACATGGGATATGGTTCACGAAAAGACGTGAAAATCCTATTGAAACAAGGGGCGGTG
CGAGTCGATGAGGCACTTGT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MSSSAKQDSGRASFVKGTLLLSAGNLISRMLGLLYTFPFQAMVGIAGVTLYQAAYTYYAIMISISTAGIPVAVSKFIAKY
NALGEYGTSQRLFRQGMKLMLATGVVAFLLLFFAAPWLSELMVRNSENNQQYIDSLTLVTRSVSFALLLIPAMSMVRGYF
QGHQDMAPTAISQVVEQIVRILFLLSGTMLVLFVFADSNFIQPIANALGGTQSVETTELNGLKVIAVTIATFSAFIGAIG
SFAVLIMYWKRRKDIHRQTENPAGTPVRSMKSLLLELLSYSIPIVMVGVSTPLYQLIDQLTMVNTLLSTGATVSEATSAY
GFLTGNAHKIVLIPVSVAASVSMATIPLVTRSFTTGDMQKVRNQVNHIFQVSFFVTIPAVIGLVALAEPLFGTLFPGDRE
GWVYLFHYAPSAFFLAYYSVAAAILQGINRQYFTIFATSMGLLTKLALNVPLVYWLGGIGAGYATIAGYIVAIILMVWMI
QRTLHFPYKQLLRRTILMFLMGGAMFAAVFLSLLVTMNDEASWGNDIFATIVGVTIGVLVYGYLGWRSHLAGKLLGKRFE
YRRKM

Sequences:

>Translated_565_residues
MSSSAKQDSGRASFVKGTLLLSAGNLISRMLGLLYTFPFQAMVGIAGVTLYQAAYTYYAIMISISTAGIPVAVSKFIAKY
NALGEYGTSQRLFRQGMKLMLATGVVAFLLLFFAAPWLSELMVRNSENNQQYIDSLTLVTRSVSFALLLIPAMSMVRGYF
QGHQDMAPTAISQVVEQIVRILFLLSGTMLVLFVFADSNFIQPIANALGGTQSVETTELNGLKVIAVTIATFSAFIGAIG
SFAVLIMYWKRRKDIHRQTENPAGTPVRSMKSLLLELLSYSIPIVMVGVSTPLYQLIDQLTMVNTLLSTGATVSEATSAY
GFLTGNAHKIVLIPVSVAASVSMATIPLVTRSFTTGDMQKVRNQVNHIFQVSFFVTIPAVIGLVALAEPLFGTLFPGDRE
GWVYLFHYAPSAFFLAYYSVAAAILQGINRQYFTIFATSMGLLTKLALNVPLVYWLGGIGAGYATIAGYIVAIILMVWMI
QRTLHFPYKQLLRRTILMFLMGGAMFAAVFLSLLVTMNDEASWGNDIFATIVGVTIGVLVYGYLGWRSHLAGKLLGKRFE
YRRKM
>Mature_564_residues
SSSAKQDSGRASFVKGTLLLSAGNLISRMLGLLYTFPFQAMVGIAGVTLYQAAYTYYAIMISISTAGIPVAVSKFIAKYN
ALGEYGTSQRLFRQGMKLMLATGVVAFLLLFFAAPWLSELMVRNSENNQQYIDSLTLVTRSVSFALLLIPAMSMVRGYFQ
GHQDMAPTAISQVVEQIVRILFLLSGTMLVLFVFADSNFIQPIANALGGTQSVETTELNGLKVIAVTIATFSAFIGAIGS
FAVLIMYWKRRKDIHRQTENPAGTPVRSMKSLLLELLSYSIPIVMVGVSTPLYQLIDQLTMVNTLLSTGATVSEATSAYG
FLTGNAHKIVLIPVSVAASVSMATIPLVTRSFTTGDMQKVRNQVNHIFQVSFFVTIPAVIGLVALAEPLFGTLFPGDREG
WVYLFHYAPSAFFLAYYSVAAAILQGINRQYFTIFATSMGLLTKLALNVPLVYWLGGIGAGYATIAGYIVAIILMVWMIQ
RTLHFPYKQLLRRTILMFLMGGAMFAAVFLSLLVTMNDEASWGNDIFATIVGVTIGVLVYGYLGWRSHLAGKLLGKRFEY
RRKM

Specific function: May play a role in cell division, although it is not essential for growth [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Note=Localizes at the septum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 61865; Mature: 61734

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSAKQDSGRASFVKGTLLLSAGNLISRMLGLLYTFPFQAMVGIAGVTLYQAAYTYYAI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MISISTAGIPVAVSKFIAKYNALGEYGTSQRLFRQGMKLMLATGVVAFLLLFFAAPWLSE
HEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMVRNSENNQQYIDSLTLVTRSVSFALLLIPAMSMVRGYFQGHQDMAPTAISQVVEQIVR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ILFLLSGTMLVLFVFADSNFIQPIANALGGTQSVETTELNGLKVIAVTIATFSAFIGAIG
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEECCCCEEEHHHHHHHHHHHHHHHH
SFAVLIMYWKRRKDIHRQTENPAGTPVRSMKSLLLELLSYSIPIVMVGVSTPLYQLIDQL
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
TMVNTLLSTGATVSEATSAYGFLTGNAHKIVLIPVSVAASVSMATIPLVTRSFTTGDMQK
HHHHHHHHCCCCHHHHHHHCEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHH
VRNQVNHIFQVSFFVTIPAVIGLVALAEPLFGTLFPGDREGWVYLFHYAPSAFFLAYYSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHH
AAAILQGINRQYFTIFATSMGLLTKLALNVPLVYWLGGIGAGYATIAGYIVAIILMVWMI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QRTLHFPYKQLLRRTILMFLMGGAMFAAVFLSLLVTMNDEASWGNDIFATIVGVTIGVLV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
YGYLGWRSHLAGKLLGKRFEYRRKM
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSSAKQDSGRASFVKGTLLLSAGNLISRMLGLLYTFPFQAMVGIAGVTLYQAAYTYYAI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MISISTAGIPVAVSKFIAKYNALGEYGTSQRLFRQGMKLMLATGVVAFLLLFFAAPWLSE
HEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMVRNSENNQQYIDSLTLVTRSVSFALLLIPAMSMVRGYFQGHQDMAPTAISQVVEQIVR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ILFLLSGTMLVLFVFADSNFIQPIANALGGTQSVETTELNGLKVIAVTIATFSAFIGAIG
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEECCCCEEEHHHHHHHHHHHHHHHH
SFAVLIMYWKRRKDIHRQTENPAGTPVRSMKSLLLELLSYSIPIVMVGVSTPLYQLIDQL
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
TMVNTLLSTGATVSEATSAYGFLTGNAHKIVLIPVSVAASVSMATIPLVTRSFTTGDMQK
HHHHHHHHCCCCHHHHHHHCEEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHH
VRNQVNHIFQVSFFVTIPAVIGLVALAEPLFGTLFPGDREGWVYLFHYAPSAFFLAYYSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHH
AAAILQGINRQYFTIFATSMGLLTKLALNVPLVYWLGGIGAGYATIAGYIVAIILMVWMI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QRTLHFPYKQLLRRTILMFLMGGAMFAAVFLSLLVTMNDEASWGNDIFATIVGVTIGVLV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
YGYLGWRSHLAGKLLGKRFEYRRKM
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]