Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is ytoP [H]

Identifier: 229916442

GI number: 229916442

Start: 666242

End: 667315

Strand: Reverse

Name: ytoP [H]

Synonym: EAT1b_0712

Alternate gene names: 229916442

Gene position: 667315-666242 (Counterclockwise)

Preceding gene: 229916447

Following gene: 229916441

Centisome position: 22.24

GC content: 50.09

Gene sequence:

>1074_bases
ATGGATCAGAAGACGAGAGATTTATTTAAGACGCTAACAGAACTCCCAGGAGCTCCTGGGTTCGAGTCTGAAGTTCGTCA
ATTTGTACGTGGACGAATTGAACCCCATTCAGATGAAATTGTCACGGATGGCATCGGATCAATTTTTGGAAAACGTGTCG
GAGACGAGTCGGGACCGAAAGTCATGGTAGCCGGACATATGGATGAGGTCGCTTTTATGGTGACACGGATCACCGAGAAC
GGCATGCTTTACATACAACCACTCGGTGGCTGGTGGAACCAAGTGCTCATGGCGCAACGCTTCGACATCATCACGTCGAA
CGGTAAAATTCCGGGTGTCGTCGCTTCGACACCGCCTCATTTGTTAGGTCCAGATGCAATGAGTAAACCGATGGACATCA
AGCAGATGTTTATCGATATCGGAGCAGATTCGAAAGAAGAAGCAGAGTCATGGGGTGTACGTCCGGGGGTCCCTGCTGTT
CCATCGAGCGCATTTACCCCACTTCATCACCCGAAAAAGATTATGGCCAAAGCTTGGGACAATCGTTATGGCGTCGGTCT
TGCAATCGAATTGTTGGAGGAAACGACAAAAGCGGATCATCCAAACATCTTGTTCTCGGGTGCTACCGTGCAAGAAGAAG
TCGGATTACGTGGAGCGCAGACAGCATCTGAATTGATTCAGCCAGATGTGGCACTCGTACTCGATGCTTCACCGGCTAAT
GATGCTTCAGGAAGTAAAACGGAGTTCGGTCAGCTCGGTGAGGGAGCATTGATCCGAATTTTAGATCGCGTCATGGTCAT
GTCTCCTGAAATGCGTGATTTCTTACTCGATACGGCTTCAGACGAAAACATCAAGACACAATATTTCGTCTCGCCAGGCG
GCACCGATGCGGGGCGCGTTCACATGAGCGGAGAAGGGGTGCCGACAGCCGTCATTGGCGTCGCATCTCGTTATATCCAT
ACACATGCCTCGATTCTTCATACGGATGACTACGATGCAGCGAAAGCGTTGCTCAAAGCGTTGGTCAAGCGGCTTGATCG
TTCGACACTTGAAACGCTACGTCCGTCTCTGTAA

Upstream 100 bases:

>100_bases
CGTACCAAAACCTGTACCCGAATGGAATGAAAAGCATTCGCATCCTGTCAAAACTTTTGTATATAATGAGACAAGAACGG
TTAGGAAAGGATGATGAAAG

Downstream 100 bases:

>100_bases
ATCAAACATTCCGTTCACTCGAAAGATGAGTGGACGGTTTTTTAATGGATGTTCTTGCTATTTCATGAAAACGTCTTATA
CTGATAAAGGTGTTTATACA

Product: Glutamyl aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MDQKTRDLFKTLTELPGAPGFESEVRQFVRGRIEPHSDEIVTDGIGSIFGKRVGDESGPKVMVAGHMDEVAFMVTRITEN
GMLYIQPLGGWWNQVLMAQRFDIITSNGKIPGVVASTPPHLLGPDAMSKPMDIKQMFIDIGADSKEEAESWGVRPGVPAV
PSSAFTPLHHPKKIMAKAWDNRYGVGLAIELLEETTKADHPNILFSGATVQEEVGLRGAQTASELIQPDVALVLDASPAN
DASGSKTEFGQLGEGALIRILDRVMVMSPEMRDFLLDTASDENIKTQYFVSPGGTDAGRVHMSGEGVPTAVIGVASRYIH
THASILHTDDYDAAKALLKALVKRLDRSTLETLRPSL

Sequences:

>Translated_357_residues
MDQKTRDLFKTLTELPGAPGFESEVRQFVRGRIEPHSDEIVTDGIGSIFGKRVGDESGPKVMVAGHMDEVAFMVTRITEN
GMLYIQPLGGWWNQVLMAQRFDIITSNGKIPGVVASTPPHLLGPDAMSKPMDIKQMFIDIGADSKEEAESWGVRPGVPAV
PSSAFTPLHHPKKIMAKAWDNRYGVGLAIELLEETTKADHPNILFSGATVQEEVGLRGAQTASELIQPDVALVLDASPAN
DASGSKTEFGQLGEGALIRILDRVMVMSPEMRDFLLDTASDENIKTQYFVSPGGTDAGRVHMSGEGVPTAVIGVASRYIH
THASILHTDDYDAAKALLKALVKRLDRSTLETLRPSL
>Mature_357_residues
MDQKTRDLFKTLTELPGAPGFESEVRQFVRGRIEPHSDEIVTDGIGSIFGKRVGDESGPKVMVAGHMDEVAFMVTRITEN
GMLYIQPLGGWWNQVLMAQRFDIITSNGKIPGVVASTPPHLLGPDAMSKPMDIKQMFIDIGADSKEEAESWGVRPGVPAV
PSSAFTPLHHPKKIMAKAWDNRYGVGLAIELLEETTKADHPNILFSGATVQEEVGLRGAQTASELIQPDVALVLDASPAN
DASGSKTEFGQLGEGALIRILDRVMVMSPEMRDFLLDTASDENIKTQYFVSPGGTDAGRVHMSGEGVPTAVIGVASRYIH
THASILHTDDYDAAKALLKALVKRLDRSTLETLRPSL

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=344, Percent_Identity=38.3720930232558, Blast_Score=222, Evalue=2e-59,
Organism=Escherichia coli, GI1788727, Length=349, Percent_Identity=35.8166189111748, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI87082417, Length=359, Percent_Identity=25.3481894150418, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 38697; Mature: 38697

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQKTRDLFKTLTELPGAPGFESEVRQFVRGRIEPHSDEIVTDGIGSIFGKRVGDESGPK
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCE
VMVAGHMDEVAFMVTRITENGMLYIQPLGGWWNQVLMAQRFDIITSNGKIPGVVASTPPH
EEEECCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHEEECCCCCCEEECCCCCC
LLGPDAMSKPMDIKQMFIDIGADSKEEAESWGVRPGVPAVPSSAFTPLHHPKKIMAKAWD
CCCCHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
NRYGVGLAIELLEETTKADHPNILFSGATVQEEVGLRGAQTASELIQPDVALVLDASPAN
CCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCHHHHHHHHCCCEEEEEECCCCC
DASGSKTEFGQLGEGALIRILDRVMVMSPEMRDFLLDTASDENIKTQYFVSPGGTDAGRV
CCCCCCCHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEE
HMSGEGVPTAVIGVASRYIHTHASILHTDDYDAAKALLKALVKRLDRSTLETLRPSL
EECCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDQKTRDLFKTLTELPGAPGFESEVRQFVRGRIEPHSDEIVTDGIGSIFGKRVGDESGPK
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCE
VMVAGHMDEVAFMVTRITENGMLYIQPLGGWWNQVLMAQRFDIITSNGKIPGVVASTPPH
EEEECCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHEEECCCCCCEEECCCCCC
LLGPDAMSKPMDIKQMFIDIGADSKEEAESWGVRPGVPAVPSSAFTPLHHPKKIMAKAWD
CCCCHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
NRYGVGLAIELLEETTKADHPNILFSGATVQEEVGLRGAQTASELIQPDVALVLDASPAN
CCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCHHHHHHHHCCCEEEEEECCCCC
DASGSKTEFGQLGEGALIRILDRVMVMSPEMRDFLLDTASDENIKTQYFVSPGGTDAGRV
CCCCCCCHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEE
HMSGEGVPTAVIGVASRYIHTHASILHTDDYDAAKALLKALVKRLDRSTLETLRPSL
EECCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]