| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916431
Identifier: 229916431
GI number: 229916431
Start: 657693
End: 658244
Strand: Reverse
Name: 229916431
Synonym: EAT1b_0701
Alternate gene names: NA
Gene position: 658244-657693 (Counterclockwise)
Preceding gene: 229916432
Following gene: 229916430
Centisome position: 21.94
GC content: 47.83
Gene sequence:
>552_bases ATGACAGACCAAAAGCAATCAACAGAACAGAATCAATCAAGTAGCGGATTTTTGACGGGTGTCATTCTCGGAGGGATCGT TGGGGCGGCGGTTGCGCTATTGACATCACCGAAAAATGGACGTGAAGTTCGGACGTACCTTGACGAGAAGACATCGACAT CGCGAGAACGTCTGACTGTCAAATCGAAAGAGATGCGTGAAAAAGCAGAACCGGTCGTTGGGGAATGGATTAAAGTGGCG AGCGATAAGGCGGCACCTGTCCTCAATATCGTAAAAGATAAGGCACGGGAAGCTGCAGAATTAAAGCAACAGATCGATGA GGACGACCTTTCGATTGAAGAGGCGATGGAGAAAGCGGATCAGCTCGTCGCAGAAGCGGAATCTGAAGTGAAAGAACAGA TGGACCGTGCGGCTGAAGAAGAGGCAAATCCGTCGAACGCGTCGGATTCTGAATCAAACGATTCGCTCGAAGCACCTGTC AATGAGTTGCTCGATGAGGAATCGAAAGAAGGACTCAATGATTTGAAGAAAGACCTTAAAAAAGATGAATGA
Upstream 100 bases:
>100_bases CGTACACGACGTGAAAAGAAAGCAGAAACACCTGTATCACCTGATTTGATTCAAACGGACGATACAATCAAATAACTAAA TTTCGGGGAGGAACTCACAC
Downstream 100 bases:
>100_bases CATGTAAGGGCCGAATGCATTCGGTCCTTTTTTGGTGATTTTGTGACGTAGAAGGTTTCCTTATGACAAAGCGCACAAAG TTCGATATAATTAGGAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTDQKQSTEQNQSSSGFLTGVILGGIVGAAVALLTSPKNGREVRTYLDEKTSTSRERLTVKSKEMREKAEPVVGEWIKVA SDKAAPVLNIVKDKAREAAELKQQIDEDDLSIEEAMEKADQLVAEAESEVKEQMDRAAEEEANPSNASDSESNDSLEAPV NELLDEESKEGLNDLKKDLKKDE
Sequences:
>Translated_183_residues MTDQKQSTEQNQSSSGFLTGVILGGIVGAAVALLTSPKNGREVRTYLDEKTSTSRERLTVKSKEMREKAEPVVGEWIKVA SDKAAPVLNIVKDKAREAAELKQQIDEDDLSIEEAMEKADQLVAEAESEVKEQMDRAAEEEANPSNASDSESNDSLEAPV NELLDEESKEGLNDLKKDLKKDE >Mature_182_residues TDQKQSTEQNQSSSGFLTGVILGGIVGAAVALLTSPKNGREVRTYLDEKTSTSRERLTVKSKEMREKAEPVVGEWIKVAS DKAAPVLNIVKDKAREAAELKQQIDEDDLSIEEAMEKADQLVAEAESEVKEQMDRAAEEEANPSNASDSESNDSLEAPVN ELLDEESKEGLNDLKKDLKKDE
Specific function: Unknown
COG id: COG4980
COG function: function code R; Gas vesicle protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20079; Mature: 19948
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQKQSTEQNQSSSGFLTGVILGGIVGAAVALLTSPKNGREVRTYLDEKTSTSRERLTV CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHH KSKEMREKAEPVVGEWIKVASDKAAPVLNIVKDKAREAAELKQQIDEDDLSIEEAMEKAD HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QLVAEAESEVKEQMDRAAEEEANPSNASDSESNDSLEAPVNELLDEESKEGLNDLKKDLK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KDE CCC >Mature Secondary Structure TDQKQSTEQNQSSSGFLTGVILGGIVGAAVALLTSPKNGREVRTYLDEKTSTSRERLTV CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHH KSKEMREKAEPVVGEWIKVASDKAAPVLNIVKDKAREAAELKQQIDEDDLSIEEAMEKAD HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QLVAEAESEVKEQMDRAAEEEANPSNASDSESNDSLEAPVNELLDEESKEGLNDLKKDLK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KDE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA