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The map label for this gene is ccpA [H]

Identifier: 229916429

GI number: 229916429

Start: 655328

End: 656341

Strand: Reverse

Name: ccpA [H]

Synonym: EAT1b_0699

Alternate gene names: 229916429

Gene position: 656341-655328 (Counterclockwise)

Preceding gene: 229916430

Following gene: 229916425

Centisome position: 21.88

GC content: 49.61

Gene sequence:

>1014_bases
ATGAATAGTAATAACGTAACGATTTACGATGTCGCACGAGAAGCCGGGGTGTCGATGGCAACCGTTTCTCGTGTCGTCAA
CGGAAACCCGAACGTCAAACCAACGACGCGCAAGAAAGTACAAGACGCGATTGACCGTCTTGGTTATCGTCCGAACGCCG
TCGCGCGTGGACTTGCGAGTAAAAAAACGACAACGGTTGGTGTCATCGTACCGGATATCTCGAACATCTTCTTTGCTGAT
TTAGCACGAGGCATTGAAGACGTGGCGACGATGTACAAATACAACATCATCCTTGGTAACTCGGATTCGAGTCGTGACAA
GGAAGTGCATTTACTCAATACGTTGTTAGGGAAACAAGTGGACGGCATCATCTTCATGGGTGGACGTTTGCATGAAGACC
TCGTCGAAGAGTTCAAAAAATCACCGGTTCCAATCGTGCTCGCAGCGACGTTGAACCAAGGATATGATCTTCCTGCCGTC
AACATTGATTATGAGCAGGCTGCATATGATGCGACACACATGTTGATCAACCATGGGCATGATCGCGTCGGATTCATCAC
TGGACCGCTCGAGCAACAGATCAATGGCGAGAAGAAATTTGCCGGTTACCGCCGTGCCCTTGAAGATGCAGGTCTTCCAT
TCCATGAAAACGATATGATTCTCGGTAATTATACGTATGCGTCTGGTCTCGAGGCGATGCAAAAGATGTTGCAACGTGAC
GATTGTCCGAAAGCCATCTTCGCAGGGACGGACGAGATGGCACTCGGTGTCATCCACGCGATCCAAGATGCAGGCTACTC
GGTTCCAAACGACTTTGAAGTCGTCGGTCACGATAACACGCGTCTCGCGACGATGATTCGTCCGAAGTTGACGACGGTCG
TTCAACCGATGTACGATATCGGAGCCGTCGCCATGCGTCTCTTGACTAAGATTTTGAACGCAGAAGAAATCGAAGAGAAA
AACGTCGTACTTCCTCACCGAATCGAGCGTCGTGACTCGCTTCGCCAAGATTAA

Upstream 100 bases:

>100_bases
GCATGAAGACAGGGTAAATGGATGACAGATACCTGTCTTCCTTTTTTAAGACGTTTTATGAAAACTTTTTGAAAATCAGG
ACTTGTAGGAGGAGTAGTTT

Downstream 100 bases:

>100_bases
TCAAAAGCCTCCCCATCCGCCACATCATGTGAGGGAAAGGGGAGGCTTATTTTTATAGGTAAATTGACTTTCGGTCATTT
GATATGAACGGCCAAAAGGC

Product: global transcriptional regulator, catabolite control protein A

Products: NA

Alternate protein names: Catabolite control protein [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNSNNVTIYDVAREAGVSMATVSRVVNGNPNVKPTTRKKVQDAIDRLGYRPNAVARGLASKKTTTVGVIVPDISNIFFAD
LARGIEDVATMYKYNIILGNSDSSRDKEVHLLNTLLGKQVDGIIFMGGRLHEDLVEEFKKSPVPIVLAATLNQGYDLPAV
NIDYEQAAYDATHMLINHGHDRVGFITGPLEQQINGEKKFAGYRRALEDAGLPFHENDMILGNYTYASGLEAMQKMLQRD
DCPKAIFAGTDEMALGVIHAIQDAGYSVPNDFEVVGHDNTRLATMIRPKLTTVVQPMYDIGAVAMRLLTKILNAEEIEEK
NVVLPHRIERRDSLRQD

Sequences:

>Translated_337_residues
MNSNNVTIYDVAREAGVSMATVSRVVNGNPNVKPTTRKKVQDAIDRLGYRPNAVARGLASKKTTTVGVIVPDISNIFFAD
LARGIEDVATMYKYNIILGNSDSSRDKEVHLLNTLLGKQVDGIIFMGGRLHEDLVEEFKKSPVPIVLAATLNQGYDLPAV
NIDYEQAAYDATHMLINHGHDRVGFITGPLEQQINGEKKFAGYRRALEDAGLPFHENDMILGNYTYASGLEAMQKMLQRD
DCPKAIFAGTDEMALGVIHAIQDAGYSVPNDFEVVGHDNTRLATMIRPKLTTVVQPMYDIGAVAMRLLTKILNAEEIEEK
NVVLPHRIERRDSLRQD
>Mature_337_residues
MNSNNVTIYDVAREAGVSMATVSRVVNGNPNVKPTTRKKVQDAIDRLGYRPNAVARGLASKKTTTVGVIVPDISNIFFAD
LARGIEDVATMYKYNIILGNSDSSRDKEVHLLNTLLGKQVDGIIFMGGRLHEDLVEEFKKSPVPIVLAATLNQGYDLPAV
NIDYEQAAYDATHMLINHGHDRVGFITGPLEQQINGEKKFAGYRRALEDAGLPFHENDMILGNYTYASGLEAMQKMLQRD
DCPKAIFAGTDEMALGVIHAIQDAGYSVPNDFEVVGHDNTRLATMIRPKLTTVVQPMYDIGAVAMRLLTKILNAEEIEEK
NVVLPHRIERRDSLRQD

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes such as the alpha- amylase (amyE) and the acetyl-coenzyme A synthetase (acsA); and in the positive regulation of genes involved in excretion of excess carbon such

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790369, Length=311, Percent_Identity=35.048231511254, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI1787948, Length=330, Percent_Identity=34.2424242424242, Blast_Score=184, Evalue=8e-48,
Organism=Escherichia coli, GI1790194, Length=326, Percent_Identity=33.1288343558282, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1788474, Length=302, Percent_Identity=34.1059602649007, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1789202, Length=292, Percent_Identity=32.1917808219178, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1789068, Length=331, Percent_Identity=30.2114803625378, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1787580, Length=327, Percent_Identity=27.5229357798165, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI48994940, Length=316, Percent_Identity=28.4810126582279, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1786540, Length=331, Percent_Identity=27.7945619335347, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1787906, Length=338, Percent_Identity=26.3313609467456, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1790715, Length=317, Percent_Identity=26.1829652996845, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1789456, Length=312, Percent_Identity=29.8076923076923, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1786268, Length=308, Percent_Identity=25.974025974026, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1790689, Length=329, Percent_Identity=22.4924012158055, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37295; Mature: 37295

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNNVTIYDVAREAGVSMATVSRVVNGNPNVKPTTRKKVQDAIDRLGYRPNAVARGLAS
CCCCCEEEEEEHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCC
KKTTTVGVIVPDISNIFFADLARGIEDVATMYKYNIILGNSDSSRDKEVHLLNTLLGKQV
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCC
DGIIFMGGRLHEDLVEEFKKSPVPIVLAATLNQGYDLPAVNIDYEQAAYDATHMLINHGH
CCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHCCC
DRVGFITGPLEQQINGEKKFAGYRRALEDAGLPFHENDMILGNYTYASGLEAMQKMLQRD
CCEEEEECCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHC
DCPKAIFAGTDEMALGVIHAIQDAGYSVPNDFEVVGHDNTRLATMIRPKLTTVVQPMYDI
CCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHH
GAVAMRLLTKILNAEEIEEKNVVLPHRIERRDSLRQD
HHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MNSNNVTIYDVAREAGVSMATVSRVVNGNPNVKPTTRKKVQDAIDRLGYRPNAVARGLAS
CCCCCEEEEEEHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCC
KKTTTVGVIVPDISNIFFADLARGIEDVATMYKYNIILGNSDSSRDKEVHLLNTLLGKQV
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCCC
DGIIFMGGRLHEDLVEEFKKSPVPIVLAATLNQGYDLPAVNIDYEQAAYDATHMLINHGH
CCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHCCC
DRVGFITGPLEQQINGEKKFAGYRRALEDAGLPFHENDMILGNYTYASGLEAMQKMLQRD
CCEEEEECCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHC
DCPKAIFAGTDEMALGVIHAIQDAGYSVPNDFEVVGHDNTRLATMIRPKLTTVVQPMYDI
CCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHH
GAVAMRLLTKILNAEEIEEKNVVLPHRIERRDSLRQD
HHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]