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The map label for this gene is ytsP [H]

Identifier: 229916420

GI number: 229916420

Start: 644751

End: 645233

Strand: Direct

Name: ytsP [H]

Synonym: EAT1b_0690

Alternate gene names: 229916420

Gene position: 644751-645233 (Clockwise)

Preceding gene: 229916417

Following gene: 229916421

Centisome position: 21.49

GC content: 49.07

Gene sequence:

>483_bases
ATGTTCCAAACGACATCGTACTCAGGTGATTTGACAGCCGGTTACGAACTATTAAACAAGCAACTCGCCGCATTATTAGA
GGGCGAAACGAATACAGTGGCCAACCTTGCCAACGCTAGCGCTTTACTCAACCAATTTTTAGATCGGATCAACTGGGTCG
GATTCTACGTGACTGATTCTGAAGACAGTCTAATCCTAGGACCATTCCAGGGACTCCCTGCTTGCGTTCACATCGCGTTC
GGTAAAGGGGTTTGCGGAACTGCGGCAGCTACACAAGAAACACAGCTCGTGGCCGACGTTCATCAATTCCCTGGTCATAT
CGCATGTGATGCGGCTTCGAATTCTGAAATCGTCGTCCCTCTCGTACGTGACGGGAAAACAATCGGCGTGCTCGATATCG
ATAGCCCGGAGTTCGACCGTTTCTCAGAAATCGACCGTCAAGGACTCGAACGTTTTTGCGAAACACTTCTTCGCTATATT
TGA

Upstream 100 bases:

>100_bases
GATTGTTCATTTTTTCGGAACTTTCTAACAAGACAAATCTGAAATTTGCGTGTACCATAATGCTAAATTCTAAAAACATG
AAAGATGGAGGGGGATTCAT

Downstream 100 bases:

>100_bases
TTGACAAGAGATGGTATTCATCGTATACTCATCTTTGTGCATGAAATGACGATAGCAGTCACAGACAAACGTATCCACCT
TTCGGGCCTCGACTTTTGTC

Product: GAF sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MFQTTSYSGDLTAGYELLNKQLAALLEGETNTVANLANASALLNQFLDRINWVGFYVTDSEDSLILGPFQGLPACVHIAF
GKGVCGTAAATQETQLVADVHQFPGHIACDAASNSEIVVPLVRDGKTIGVLDIDSPEFDRFSEIDRQGLERFCETLLRYI

Sequences:

>Translated_160_residues
MFQTTSYSGDLTAGYELLNKQLAALLEGETNTVANLANASALLNQFLDRINWVGFYVTDSEDSLILGPFQGLPACVHIAF
GKGVCGTAAATQETQLVADVHQFPGHIACDAASNSEIVVPLVRDGKTIGVLDIDSPEFDRFSEIDRQGLERFCETLLRYI
>Mature_160_residues
MFQTTSYSGDLTAGYELLNKQLAALLEGETNTVANLANASALLNQFLDRINWVGFYVTDSEDSLILGPFQGLPACVHIAF
GKGVCGTAAATQETQLVADVHQFPGHIACDAASNSEIVVPLVRDGKTIGVLDIDSPEFDRFSEIDRQGLERFCETLLRYI

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=149, Percent_Identity=55.0335570469799, Blast_Score=160, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6322781, Length=163, Percent_Identity=48.4662576687117, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17359; Mature: 17359

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQTTSYSGDLTAGYELLNKQLAALLEGETNTVANLANASALLNQFLDRINWVGFYVTDS
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECC
EDSLILGPFQGLPACVHIAFGKGVCGTAAATQETQLVADVHQFPGHIACDAASNSEIVVP
CCCEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEE
LVRDGKTIGVLDIDSPEFDRFSEIDRQGLERFCETLLRYI
EECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFQTTSYSGDLTAGYELLNKQLAALLEGETNTVANLANASALLNQFLDRINWVGFYVTDS
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECC
EDSLILGPFQGLPACVHIAFGKGVCGTAAATQETQLVADVHQFPGHIACDAASNSEIVVP
CCCEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEE
LVRDGKTIGVLDIDSPEFDRFSEIDRQGLERFCETLLRYI
EECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]