| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916412
Identifier: 229916412
GI number: 229916412
Start: 635811
End: 636248
Strand: Direct
Name: 229916412
Synonym: EAT1b_0682
Alternate gene names: NA
Gene position: 635811-636248 (Clockwise)
Preceding gene: 229916409
Following gene: 229916417
Centisome position: 21.19
GC content: 46.12
Gene sequence:
>438_bases ATGGCAATTGTATACAAACACATTTTATCTGCCGTTGACGGCTCTAAAGAGGCGGAACGTGCATTCGAAACAGCAATCGA TGTCGCGATTCGTAACGAAGGGAAACTGTACGTCGGTCATGTGATTGATACGCGGACGTTTGCGACTGTAGAAGCGTACG ATCGGACAATCACAGAGCGCGCCGAGACATATGCGAAAGAATTGCTTGAAGACTATGTCAATCGCGCGAAAGAGCGTGGC GTAAAAGAAGTCGAGACAGTGATCGAATACGGCTCACCGAAAGTGACGATTGCGAAAAAGATTGCGCCTAATCATGATAT TGATCTTATTATTTGTGGCGCGACAGGTTTAAACGCTGTAGAACGTTTCTTTATCGGAAGCGTCTCTGAAAGCATCGTCC GTTATGCGAAATGTGACGTCCTCATCGTTCGTCAATAA
Upstream 100 bases:
>100_bases ATTCACTCATTTTCATGGCGAAAAAGCGTGAAAACCGAAAGAAGTGGTATACTATATATGTAAGCCGAACGTATATTTCG AGCGAAAGGTTGGGATTTAC
Downstream 100 bases:
>100_bases TCATCCATCCATCAAAAAGGGTCTTGCGCAATCGCAAGACCCTTTTTGATGCATTACAACACCTTGACCGTAACCGTTTT GCGACCAAATTGAATCGCCG
Product: UspA domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MAIVYKHILSAVDGSKEAERAFETAIDVAIRNEGKLYVGHVIDTRTFATVEAYDRTITERAETYAKELLEDYVNRAKERG VKEVETVIEYGSPKVTIAKKIAPNHDIDLIICGATGLNAVERFFIGSVSESIVRYAKCDVLIVRQ
Sequences:
>Translated_145_residues MAIVYKHILSAVDGSKEAERAFETAIDVAIRNEGKLYVGHVIDTRTFATVEAYDRTITERAETYAKELLEDYVNRAKERG VKEVETVIEYGSPKVTIAKKIAPNHDIDLIICGATGLNAVERFFIGSVSESIVRYAKCDVLIVRQ >Mature_144_residues AIVYKHILSAVDGSKEAERAFETAIDVAIRNEGKLYVGHVIDTRTFATVEAYDRTITERAETYAKELLEDYVNRAKERGV KEVETVIEYGSPKVTIAKKIAPNHDIDLIICGATGLNAVERFFIGSVSESIVRYAKCDVLIVRQ
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 16181; Mature: 16049
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVYKHILSAVDGSKEAERAFETAIDVAIRNEGKLYVGHVIDTRTFATVEAYDRTITER CHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH AETYAKELLEDYVNRAKERGVKEVETVIEYGSPKVTIAKKIAPNHDIDLIICGATGLNAV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCHHHH ERFFIGSVSESIVRYAKCDVLIVRQ HHHHHHHHHHHHHHHHHCCEEEEEC >Mature Secondary Structure AIVYKHILSAVDGSKEAERAFETAIDVAIRNEGKLYVGHVIDTRTFATVEAYDRTITER HHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH AETYAKELLEDYVNRAKERGVKEVETVIEYGSPKVTIAKKIAPNHDIDLIICGATGLNAV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCHHHH ERFFIGSVSESIVRYAKCDVLIVRQ HHHHHHHHHHHHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA