| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916349
Identifier: 229916349
GI number: 229916349
Start: 571437
End: 572042
Strand: Direct
Name: 229916349
Synonym: EAT1b_0619
Alternate gene names: NA
Gene position: 571437-572042 (Clockwise)
Preceding gene: 229916342
Following gene: 229916355
Centisome position: 19.05
GC content: 47.03
Gene sequence:
>606_bases ATGTTTACAACAAAACAATTTAATGTATTTAAACAGGATGGACTCGACGAACGAATGTCTGGCATCCGTTCGGATATTCA ACCGCTCTTCCATCGGATTTATGACGAGGTCGGGCCAGAGCTTGAGGCTGATGTCGGTATCCCTCTTTATTTGCATGTGG CGAAGCACGCTCGTCGGACGGTGAACCCACCGAAAGATACGTGGATGGCGATTTGTCACGACAAACGTGGGTACAAAAAA CATCCGCACTTACAAGTTGGACTTTTCGACGATCGCGTCTTCATCTGGCTAGCGTTCATCTATGAGATGCCGAACAAGGA CGCCATCGCGAAACACCTGCAACAAATCGATTTGAAATCAACATTCCCTGATTTCCATATCGCGGGCGACCATATGAAAA AAGAAGCGTTACTTGTTGAAGATACGTCAACTGAAGACATTCAATCGCTACTTGAGCGATTCGGCACTGTGAAAAAGGCT GATTTCTTGATCGGCCGTCAACTTCCTGCCGATGCGTCGATTCTTCAAAATGAAGACGCATTTCTCGCGTTGGTCGAAGA CACGTTCGGTCGGCTTACACCGCTCTATCGTGATCTCGTCTTGTAA
Upstream 100 bases:
>100_bases CAATTCATACACTCGGATTTTTTCACCTTTTTTCACGATAGCAAACCTACGAAATGAAAATAAAAGCCCATTTCGGTAGA ATAGATGATGAGGTGATTAA
Downstream 100 bases:
>100_bases TATAAGAAAATGGACAAATCCTCACGAGGGACTTGTCCATTTTTTTATGAATCAGCATGTTCAAGTTTTGCTTCTCCAAT AAAGGCTGCAAAGGCTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MFTTKQFNVFKQDGLDERMSGIRSDIQPLFHRIYDEVGPELEADVGIPLYLHVAKHARRTVNPPKDTWMAICHDKRGYKK HPHLQVGLFDDRVFIWLAFIYEMPNKDAIAKHLQQIDLKSTFPDFHIAGDHMKKEALLVEDTSTEDIQSLLERFGTVKKA DFLIGRQLPADASILQNEDAFLALVEDTFGRLTPLYRDLVL
Sequences:
>Translated_201_residues MFTTKQFNVFKQDGLDERMSGIRSDIQPLFHRIYDEVGPELEADVGIPLYLHVAKHARRTVNPPKDTWMAICHDKRGYKK HPHLQVGLFDDRVFIWLAFIYEMPNKDAIAKHLQQIDLKSTFPDFHIAGDHMKKEALLVEDTSTEDIQSLLERFGTVKKA DFLIGRQLPADASILQNEDAFLALVEDTFGRLTPLYRDLVL >Mature_201_residues MFTTKQFNVFKQDGLDERMSGIRSDIQPLFHRIYDEVGPELEADVGIPLYLHVAKHARRTVNPPKDTWMAICHDKRGYKK HPHLQVGLFDDRVFIWLAFIYEMPNKDAIAKHLQQIDLKSTFPDFHIAGDHMKKEALLVEDTSTEDIQSLLERFGTVKKA DFLIGRQLPADASILQNEDAFLALVEDTFGRLTPLYRDLVL
Specific function: Unknown
COG id: COG4493
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0637 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009403 [H]
Pfam domain/function: PF06335 DUF1054 [H]
EC number: NA
Molecular weight: Translated: 23192; Mature: 23192
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTTKQFNVFKQDGLDERMSGIRSDIQPLFHRIYDEVGPELEADVGIPLYLHVAKHARRT CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC VNPPKDTWMAICHDKRGYKKHPHLQVGLFDDRVFIWLAFIYEMPNKDAIAKHLQQIDLKS CCCCHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TFPDFHIAGDHMKKEALLVEDTSTEDIQSLLERFGTVKKADFLIGRQLPADASILQNEDA CCCCCEECCCHHHHCEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHCCCCC FLALVEDTFGRLTPLYRDLVL EEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFTTKQFNVFKQDGLDERMSGIRSDIQPLFHRIYDEVGPELEADVGIPLYLHVAKHARRT CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC VNPPKDTWMAICHDKRGYKKHPHLQVGLFDDRVFIWLAFIYEMPNKDAIAKHLQQIDLKS CCCCHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TFPDFHIAGDHMKKEALLVEDTSTEDIQSLLERFGTVKKADFLIGRQLPADASILQNEDA CCCCCEECCCHHHHCEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHCCCCC FLALVEDTFGRLTPLYRDLVL EEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA