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The map label for this gene is yojE [H]

Identifier: 229916337

GI number: 229916337

Start: 556663

End: 557541

Strand: Reverse

Name: yojE [H]

Synonym: EAT1b_0607

Alternate gene names: 229916337

Gene position: 557541-556663 (Counterclockwise)

Preceding gene: 229916338

Following gene: 229916336

Centisome position: 18.59

GC content: 47.67

Gene sequence:

>879_bases
GTGAATAAGGGAGTATGGACTACAATCGGGGCCTACGTCATGTGGGGCGTCCTTCCGATTTATTGGAAATTTTTACAAGA
GGTGCCGAGTGGTCAAATTTTGGCGCATCGAATCATTTGGTCATTTTTATTTATTCTGCTCGTTCTAAGATGGACAAATC
AGTGGAAAGAATTCGGTTACGCCCTGCGACACCGTGCTACGCGAAACGCATTCATGTTGAACGGATTCATCGTCAGTGCG
AACTGGTTTGTATACATATGGGCTGTCAATCACGGATATATTATTGAAGCTTCTCTCGGATATTACATCAATCCTCTTGT
CAGTATGGTGTTAGGGGTGCTTGTCTTTCGGGAATCATTAAATCGAGTCCAATGGATGGCCGTTGGGATCGCGTCAATCG
GCGTCCTCGTCTTGACGTTAGGGTATGGTACGTTCCCATGGATTTCATTCGTCTTGGCGAGTACCTTTGGATTTTATGGA
ATGGTGAAGAAGCGCCGTCCCCTTGCTTCAACGGTCAGCCTAGGAATCGAAACGCTAGCAGTGGTCCCGGTGGCATTGCT
CTTCCTCGGAAATCAAGTTGTCACCGACAATATTGCGTATAACATGTCGCCTGTCATTTGGATCGCCCTTCTTGGAACGG
GTGTGGTCACGGCGTTACCTCTTCTCCTGTTCGGGTACGGGGCACAACATATCCCGTTCACGCTTGTCGGGTTTCTTCAA
TTCATCGCACCGACACTTAGCTTGATCATCGGGGTTGTCATGTACCATGAACCGTTCACGGCATATCATGTCTTTGCCTT
CACCTGCATTTGGCTCGCTATTTTCTTCTTTAGTTGGAACAGTTGGGTCGTCGCTCGTAAACGTCGTCAGTTGATTTAG

Upstream 100 bases:

>100_bases
GGGCGCGATTTCGCGCCTTTTTTTCATGAAACAAAAGTCTTGTATCGGGAGTCTTTCATCGACTAAACTGTCTTTAACTT
GTAAGAGAGCGGGTGAACGT

Downstream 100 bases:

>100_bases
GTTTGAAAGCTGTTACATCTCGAAAAAACATGGTAATATGTTAGATGTCAGACTTATTTGTCAGAGGAGGAAATGAATAA
TGGAATTAGCCCGTTATATC

Product: RarD protein, DMT superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNKGVWTTIGAYVMWGVLPIYWKFLQEVPSGQILAHRIIWSFLFILLVLRWTNQWKEFGYALRHRATRNAFMLNGFIVSA
NWFVYIWAVNHGYIIEASLGYYINPLVSMVLGVLVFRESLNRVQWMAVGIASIGVLVLTLGYGTFPWISFVLASTFGFYG
MVKKRRPLASTVSLGIETLAVVPVALLFLGNQVVTDNIAYNMSPVIWIALLGTGVVTALPLLLFGYGAQHIPFTLVGFLQ
FIAPTLSLIIGVVMYHEPFTAYHVFAFTCIWLAIFFFSWNSWVVARKRRQLI

Sequences:

>Translated_292_residues
MNKGVWTTIGAYVMWGVLPIYWKFLQEVPSGQILAHRIIWSFLFILLVLRWTNQWKEFGYALRHRATRNAFMLNGFIVSA
NWFVYIWAVNHGYIIEASLGYYINPLVSMVLGVLVFRESLNRVQWMAVGIASIGVLVLTLGYGTFPWISFVLASTFGFYG
MVKKRRPLASTVSLGIETLAVVPVALLFLGNQVVTDNIAYNMSPVIWIALLGTGVVTALPLLLFGYGAQHIPFTLVGFLQ
FIAPTLSLIIGVVMYHEPFTAYHVFAFTCIWLAIFFFSWNSWVVARKRRQLI
>Mature_292_residues
MNKGVWTTIGAYVMWGVLPIYWKFLQEVPSGQILAHRIIWSFLFILLVLRWTNQWKEFGYALRHRATRNAFMLNGFIVSA
NWFVYIWAVNHGYIIEASLGYYINPLVSMVLGVLVFRESLNRVQWMAVGIASIGVLVLTLGYGTFPWISFVLASTFGFYG
MVKKRRPLASTVSLGIETLAVVPVALLFLGNQVVTDNIAYNMSPVIWIALLGTGVVTALPLLLFGYGAQHIPFTLVGFLQ
FIAPTLSLIIGVVMYHEPFTAYHVFAFTCIWLAIFFFSWNSWVVARKRRQLI

Specific function: Unknown

COG id: COG2962

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI48994976, Length=292, Percent_Identity=34.9315068493151, Blast_Score=187, Evalue=6e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR004626 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33148; Mature: 33148

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKGVWTTIGAYVMWGVLPIYWKFLQEVPSGQILAHRIIWSFLFILLVLRWTNQWKEFGY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRHRATRNAFMLNGFIVSANWFVYIWAVNHGYIIEASLGYYINPLVSMVLGVLVFRESL
HHHHHHHCCEEEEEEEEEECCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
NRVQWMAVGIASIGVLVLTLGYGTFPWISFVLASTFGFYGMVKKRRPLASTVSLGIETLA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VVPVALLFLGNQVVTDNIAYNMSPVIWIALLGTGVVTALPLLLFGYGAQHIPFTLVGFLQ
HHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FIAPTLSLIIGVVMYHEPFTAYHVFAFTCIWLAIFFFSWNSWVVARKRRQLI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MNKGVWTTIGAYVMWGVLPIYWKFLQEVPSGQILAHRIIWSFLFILLVLRWTNQWKEFGY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALRHRATRNAFMLNGFIVSANWFVYIWAVNHGYIIEASLGYYINPLVSMVLGVLVFRESL
HHHHHHHCCEEEEEEEEEECCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
NRVQWMAVGIASIGVLVLTLGYGTFPWISFVLASTFGFYGMVKKRRPLASTVSLGIETLA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VVPVALLFLGNQVVTDNIAYNMSPVIWIALLGTGVVTALPLLLFGYGAQHIPFTLVGFLQ
HHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FIAPTLSLIIGVVMYHEPFTAYHVFAFTCIWLAIFFFSWNSWVVARKRRQLI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]