| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916333
Identifier: 229916333
GI number: 229916333
Start: 553537
End: 554523
Strand: Reverse
Name: 229916333
Synonym: EAT1b_0602
Alternate gene names: NA
Gene position: 554523-553537 (Counterclockwise)
Preceding gene: 229916334
Following gene: 229916332
Centisome position: 18.48
GC content: 49.14
Gene sequence:
>987_bases ATGACACCAGAATTACTGACAACGTTACTCATTACAGGTGGAGGATTGATTGCACTTGCCGTATTCTTCACGTTCGTACC AGTCGGACTATGGATCAGTTCGTTTGCAGCGGGCGTCCACGTCTCGATCTTCACATTGATTGGAATGCGCCTTCGTCGCG TTATTCCTTCGAAAATCGTGAACCCGTTGATTAAAGCGGTTAAAGCAGGAATTGAATTAAACACGAACCAACTTGAGAGT CACTTCTTGGCTGGTGGTAACGTAGACCGCGTTGTGAACGCATTGATTGCGGCGCACCGTGCGAATATTGAATTGTCGTT CGAACGTGCTGCTGCCATTGATTTGGCAGGACGAAACGTGCTCGAGGCTGTACAGATGTCTGTTAACCCGAAAGTCATTG AGACGCCGTTTATTGCGGGTGTCGCAATGGACGGGATTGAAGTGAAGGCGAAAGCACGTATTACCGTACGTGCGAATATC GATCGTCTCGTCGGTGGTGCGGGAGAAGAAACGATTATCGCCCGTGTCGGTGAAGGGGTCGTGTCGACAATCGGTTCACA AAACAACCACAAGCACGTCTTGGAGAATCCGGATATGATTTCACGGACTGTCCTCACAAAAGGGTTAGATTCAGGAACAG CGTTTGAGATTCTTTCAATCGATATTGCCGACATCGATATCGGTAAGAACATCGGCGCGGTCTTGCAGACGGACCAAGCA GAAGCGGATAAGAAAATCGCTCAAGCGAAGGCGGAAGAACGTCGCGCGATGGCGATTGCGCGCGAACAAGAAATGAAATC TTCAGTAGAAGAAATGCGTGCAAAAGTTGTCGGTGCCGAAGCGGAAGTCCCGCTCGCGATGGCAGAAGCGTTACGAAACG GAAAGCTTGGTGTCATGGATTACGTGAACTACTTGAACGTTCAAGCGGATACAGAAATGCGAAAAGCGATTGGGGCACCT GTCGATTCTGAATCAGATAATGAGTGA
Upstream 100 bases:
>100_bases GTGGCTATCTCGATCAGCAGACAAAAATTCAGGTTTATAAAGTGGATTCTGGACGGATTGTCGTTCGAAGCTTTGTAGAA CCGAAGGAGGATGTAACAGA
Downstream 100 bases:
>100_bases TTGATATGGATGGACTATGGGTACTCTTGTTAGCCGCCTTCGGAATTGCTTCGGCAGTGATGAAGCGGCTCGAAAAGTCA CCGTCCTCTGGAGACCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTPELLTTLLITGGGLIALAVFFTFVPVGLWISSFAAGVHVSIFTLIGMRLRRVIPSKIVNPLIKAVKAGIELNTNQLES HFLAGGNVDRVVNALIAAHRANIELSFERAAAIDLAGRNVLEAVQMSVNPKVIETPFIAGVAMDGIEVKAKARITVRANI DRLVGGAGEETIIARVGEGVVSTIGSQNNHKHVLENPDMISRTVLTKGLDSGTAFEILSIDIADIDIGKNIGAVLQTDQA EADKKIAQAKAEERRAMAIAREQEMKSSVEEMRAKVVGAEAEVPLAMAEALRNGKLGVMDYVNYLNVQADTEMRKAIGAP VDSESDNE
Sequences:
>Translated_328_residues MTPELLTTLLITGGGLIALAVFFTFVPVGLWISSFAAGVHVSIFTLIGMRLRRVIPSKIVNPLIKAVKAGIELNTNQLES HFLAGGNVDRVVNALIAAHRANIELSFERAAAIDLAGRNVLEAVQMSVNPKVIETPFIAGVAMDGIEVKAKARITVRANI DRLVGGAGEETIIARVGEGVVSTIGSQNNHKHVLENPDMISRTVLTKGLDSGTAFEILSIDIADIDIGKNIGAVLQTDQA EADKKIAQAKAEERRAMAIAREQEMKSSVEEMRAKVVGAEAEVPLAMAEALRNGKLGVMDYVNYLNVQADTEMRKAIGAP VDSESDNE >Mature_327_residues TPELLTTLLITGGGLIALAVFFTFVPVGLWISSFAAGVHVSIFTLIGMRLRRVIPSKIVNPLIKAVKAGIELNTNQLESH FLAGGNVDRVVNALIAAHRANIELSFERAAAIDLAGRNVLEAVQMSVNPKVIETPFIAGVAMDGIEVKAKARITVRANID RLVGGAGEETIIARVGEGVVSTIGSQNNHKHVLENPDMISRTVLTKGLDSGTAFEILSIDIADIDIGKNIGAVLQTDQAE ADKKIAQAKAEERRAMAIAREQEMKSSVEEMRAKVVGAEAEVPLAMAEALRNGKLGVMDYVNYLNVQADTEMRKAIGAPV DSESDNE
Specific function: Unknown
COG id: COG4864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0365 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y602_EXISA (C4L412)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002884979.1 - GeneID: 7871341 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_0602 - OMA: ENPDMIS - ProtClustDB: PRK13665 - GO: GO:0005737 - HAMAP: MF_01562 - InterPro: IPR015866 - InterPro: IPR022853 - Gene3D: G3DSA:1.10.287.40
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35041; Mature: 34910
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x2528741c)-; HASH(0x2516df78)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPELLTTLLITGGGLIALAVFFTFVPVGLWISSFAAGVHVSIFTLIGMRLRRVIPSKIV CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NPLIKAVKAGIELNTNQLESHFLAGGNVDRVVNALIAAHRANIELSFERAAAIDLAGRNV HHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCHHH LEAVQMSVNPKVIETPFIAGVAMDGIEVKAKARITVRANIDRLVGGAGEETIIARVGEGV HHHHHHCCCCCEECCCHHHHEEECCEEEEEEEEEEEEECHHHHHCCCCCHHHHHHHCCHH VSTIGSQNNHKHVLENPDMISRTVLTKGLDSGTAFEILSIDIADIDIGKNIGAVLQTDQA HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCHHEECCHH EADKKIAQAKAEERRAMAIAREQEMKSSVEEMRAKVVGAEAEVPLAMAEALRNGKLGVMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHH YVNYLNVQADTEMRKAIGAPVDSESDNE HHHHHCCCCCHHHHHHHCCCCCCCCCCH >Mature Secondary Structure TPELLTTLLITGGGLIALAVFFTFVPVGLWISSFAAGVHVSIFTLIGMRLRRVIPSKIV CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NPLIKAVKAGIELNTNQLESHFLAGGNVDRVVNALIAAHRANIELSFERAAAIDLAGRNV HHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCHHH LEAVQMSVNPKVIETPFIAGVAMDGIEVKAKARITVRANIDRLVGGAGEETIIARVGEGV HHHHHHCCCCCEECCCHHHHEEECCEEEEEEEEEEEEECHHHHHCCCCCHHHHHHHCCHH VSTIGSQNNHKHVLENPDMISRTVLTKGLDSGTAFEILSIDIADIDIGKNIGAVLQTDQA HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCHHEECCHH EADKKIAQAKAEERRAMAIAREQEMKSSVEEMRAKVVGAEAEVPLAMAEALRNGKLGVMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHH YVNYLNVQADTEMRKAIGAPVDSESDNE HHHHHCCCCCHHHHHHHCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA