| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is cshB [H]
Identifier: 229916313
GI number: 229916313
Start: 532002
End: 533345
Strand: Reverse
Name: cshB [H]
Synonym: EAT1b_0582
Alternate gene names: 229916313
Gene position: 533345-532002 (Counterclockwise)
Preceding gene: 229916314
Following gene: 229916312
Centisome position: 17.78
GC content: 47.92
Gene sequence:
>1344_bases TTGAACAGCTTCCAACAGTTCAAATTGCTACCGTTTATGGTTGATGCGTTAACAGAAAAGCGCATTACGAAACCGACCGA TATACAAGCCCGGATTATTCCGGCTGCCTTGAATGGTCGAGATATTATTGGAAAATCACAGACAGGAACGGGTAAAACAC TTGCGTTCTTGTTACCGATCGTTGAAGCGATCAACCCAGAAGATGCTTCAGTACAAGCAATCGTCGTCGCACCGACACGC GAACTCGCTTGGCAGATTCATGAAGAATTGAAATCAATTTTGATTAAAAACCCGGATTACATCAAATCGAGTTTGATTGT CGGAGGGACAGACCGCGAACGTCAGATCGATAAGATGAAAAATCCACCACAATTGATCATCGGGACACCGGGACGAATCC TTGATCTCATGAAAGCACAGGCGTTATTCCCGCACAAAGTGACACACTTTGTCGTCGATGAAGCCGATCAAATGCTCGAT ATGGGATTCTTGCCGGAGGTCGACCGCATCGCACAGGCGCTTCCTGAAAAACTGCAAACGATGGTCTTCTCAGCGACGAT TCCTGAGAACCTTGAACCGTTCTTGAAGAAATACCTTCATGACCCACGCTTTGCAGAGGCGAGCCCCGAGCATCGCGTCG CACCAAAAATCAAGCACCACGTGATTCCCGTTCGTCACCGTGACCGTAAAGAATTGACTGTCGAAATTGCGAAAGCAATC AATCCATTCGTTTGTCTCGTGTTCACCAATACGAAACAAGAGGCAGATGAGTTGGAGACGTCGTTCCGCGAAGCAGGTCT AAACGTCGGTACGTTGCACGGAGATATGCAGGCACGTCGCCGCAAACAAGCCATCAAGGACATCAATGATGCGAAATATC AGTATGTGATTGCTACGGATTTAGCGGCTCGCGGTATCGATATTTCAGGAGTCTCTCACGTCATCAACCATGGGATTCCG AAAGACCTTGATTTCTATACGCACCGTGTCGGTCGTACGGGACGTGCGGGCGCATCAGGTGAGGCGTACACACTATATGA GGACCATGAGAATGGACCGATTAACCGTCTCGAAGAACGTGGGTTTGAATTTACACACGTCGATTTGCGCAACGGTTCGA TTCAACCGATTAAAACACGTCGTCGTCGTCAAACAGACCGGAAGATGAAAGTCTCGCATACGGCACACAGTCGCATGGCC GGTGAAATCAAGAAGGCGAAGAAGAAAGTGAAGCCTGGCTATAAGAAGAAATTCAAGTATAAGTTGAAAGAGACGGCATC ACGCGAGCATATGCAACAACAACGCTCGGATCGTCGTGCAGCACGTAAGAAAAACAAACGTTAA
Upstream 100 bases:
>100_bases TCATCGAGTTATTTATATGAAGGTGTGGCAAAAGATTGATTGACAAATCATTTGATTCCGCTATGCTAGGAAAAGTGGAA AGAAACAGGAGGTGTATCGA
Downstream 100 bases:
>100_bases TTTTTTGAGAGAATCGACTTCTTGGAGTCGGTTCTTCTTTTTGTGTAAACTAAAGAGAGAAGCAAATGAAGGGAAGATGA GGATGTTAAAAATAGGTTCA
Product: DEAD/DEAH box helicase domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MNSFQQFKLLPFMVDALTEKRITKPTDIQARIIPAALNGRDIIGKSQTGTGKTLAFLLPIVEAINPEDASVQAIVVAPTR ELAWQIHEELKSILIKNPDYIKSSLIVGGTDRERQIDKMKNPPQLIIGTPGRILDLMKAQALFPHKVTHFVVDEADQMLD MGFLPEVDRIAQALPEKLQTMVFSATIPENLEPFLKKYLHDPRFAEASPEHRVAPKIKHHVIPVRHRDRKELTVEIAKAI NPFVCLVFTNTKQEADELETSFREAGLNVGTLHGDMQARRRKQAIKDINDAKYQYVIATDLAARGIDISGVSHVINHGIP KDLDFYTHRVGRTGRAGASGEAYTLYEDHENGPINRLEERGFEFTHVDLRNGSIQPIKTRRRRQTDRKMKVSHTAHSRMA GEIKKAKKKVKPGYKKKFKYKLKETASREHMQQQRSDRRAARKKNKR
Sequences:
>Translated_447_residues MNSFQQFKLLPFMVDALTEKRITKPTDIQARIIPAALNGRDIIGKSQTGTGKTLAFLLPIVEAINPEDASVQAIVVAPTR ELAWQIHEELKSILIKNPDYIKSSLIVGGTDRERQIDKMKNPPQLIIGTPGRILDLMKAQALFPHKVTHFVVDEADQMLD MGFLPEVDRIAQALPEKLQTMVFSATIPENLEPFLKKYLHDPRFAEASPEHRVAPKIKHHVIPVRHRDRKELTVEIAKAI NPFVCLVFTNTKQEADELETSFREAGLNVGTLHGDMQARRRKQAIKDINDAKYQYVIATDLAARGIDISGVSHVINHGIP KDLDFYTHRVGRTGRAGASGEAYTLYEDHENGPINRLEERGFEFTHVDLRNGSIQPIKTRRRRQTDRKMKVSHTAHSRMA GEIKKAKKKVKPGYKKKFKYKLKETASREHMQQQRSDRRAARKKNKR >Mature_447_residues MNSFQQFKLLPFMVDALTEKRITKPTDIQARIIPAALNGRDIIGKSQTGTGKTLAFLLPIVEAINPEDASVQAIVVAPTR ELAWQIHEELKSILIKNPDYIKSSLIVGGTDRERQIDKMKNPPQLIIGTPGRILDLMKAQALFPHKVTHFVVDEADQMLD MGFLPEVDRIAQALPEKLQTMVFSATIPENLEPFLKKYLHDPRFAEASPEHRVAPKIKHHVIPVRHRDRKELTVEIAKAI NPFVCLVFTNTKQEADELETSFREAGLNVGTLHGDMQARRRKQAIKDINDAKYQYVIATDLAARGIDISGVSHVINHGIP KDLDFYTHRVGRTGRAGASGEAYTLYEDHENGPINRLEERGFEFTHVDLRNGSIQPIKTRRRRQTDRKMKVSHTAHSRMA GEIKKAKKKVKPGYKKKFKYKLKETASREHMQQQRSDRRAARKKNKR
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI41327771, Length=384, Percent_Identity=34.1145833333333, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI45446747, Length=356, Percent_Identity=35.3932584269663, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI45446743, Length=356, Percent_Identity=35.3932584269663, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI301171467, Length=371, Percent_Identity=33.4231805929919, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI87196351, Length=371, Percent_Identity=33.4231805929919, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=33.1476323119777, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=33.1476323119777, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI301171475, Length=371, Percent_Identity=33.4231805929919, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=33.1476323119777, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=33.1476323119777, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI169881239, Length=371, Percent_Identity=33.6927223719677, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI13514809, Length=371, Percent_Identity=33.6927223719677, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI31542656, Length=459, Percent_Identity=29.6296296296296, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI55749865, Length=352, Percent_Identity=33.2386363636364, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI20149629, Length=359, Percent_Identity=33.983286908078, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI222352149, Length=346, Percent_Identity=33.5260115606936, Blast_Score=205, Evalue=9e-53, Organism=Homo sapiens, GI7661920, Length=322, Percent_Identity=32.6086956521739, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI224593278, Length=355, Percent_Identity=34.3661971830986, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI4758138, Length=349, Percent_Identity=34.3839541547278, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI148613856, Length=363, Percent_Identity=34.1597796143251, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI38201710, Length=363, Percent_Identity=34.1597796143251, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=33.0508474576271, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI188035877, Length=329, Percent_Identity=34.9544072948328, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI50659095, Length=385, Percent_Identity=30.9090909090909, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=29.6918767507003, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI83700235, Length=332, Percent_Identity=31.3253012048193, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI4503529, Length=332, Percent_Identity=31.6265060240964, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI13129006, Length=383, Percent_Identity=30.0261096605744, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI164664518, Length=355, Percent_Identity=30.7042253521127, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI21040371, Length=372, Percent_Identity=29.0322580645161, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI8922886, Length=369, Percent_Identity=31.7073170731707, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI6005743, Length=369, Percent_Identity=31.4363143631436, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI51094101, Length=353, Percent_Identity=31.728045325779, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI164419743, Length=353, Percent_Identity=31.728045325779, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI41327776, Length=357, Percent_Identity=32.2128851540616, Blast_Score=175, Evalue=9e-44, Organism=Homo sapiens, GI13514831, Length=363, Percent_Identity=30.0275482093664, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI4758112, Length=363, Percent_Identity=27.8236914600551, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI18375623, Length=363, Percent_Identity=27.8236914600551, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI256223453, Length=350, Percent_Identity=31.4285714285714, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI62241022, Length=350, Percent_Identity=32, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI62241024, Length=330, Percent_Identity=32.4242424242424, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI164419732, Length=361, Percent_Identity=31.5789473684211, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI38327634, Length=393, Percent_Identity=28.7531806615776, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI38569505, Length=356, Percent_Identity=29.7752808988764, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI38569503, Length=356, Percent_Identity=30.0561797752809, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI17505907, Length=432, Percent_Identity=25.9259259259259, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI41327779, Length=372, Percent_Identity=29.0322580645161, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI154759257, Length=424, Percent_Identity=28.3018867924528, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI9506931, Length=394, Percent_Identity=26.3959390862944, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=28.0597014925373, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI256773275, Length=384, Percent_Identity=27.34375, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI20336298, Length=211, Percent_Identity=31.7535545023697, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI9966805, Length=307, Percent_Identity=28.3387622149837, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI87082221, Length=349, Percent_Identity=36.3896848137536, Blast_Score=240, Evalue=2e-64, Organism=Escherichia coli, GI1787016, Length=354, Percent_Identity=36.1581920903955, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI1790214, Length=351, Percent_Identity=32.7635327635328, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=33.048433048433, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1788930, Length=344, Percent_Identity=35.7558139534884, Blast_Score=194, Evalue=1e-50, Organism=Caenorhabditis elegans, GI32565321, Length=370, Percent_Identity=34.0540540540541, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI86570094, Length=344, Percent_Identity=34.8837209302326, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17537549, Length=381, Percent_Identity=34.6456692913386, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71995724, Length=322, Percent_Identity=32.2981366459627, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI71987143, Length=338, Percent_Identity=31.3609467455621, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI115532548, Length=366, Percent_Identity=32.5136612021858, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17507121, Length=322, Percent_Identity=31.9875776397516, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI115532546, Length=366, Percent_Identity=32.5136612021858, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=32.7586206896552, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI17555296, Length=357, Percent_Identity=31.0924369747899, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17552642, Length=353, Percent_Identity=35.1274787535411, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17552114, Length=350, Percent_Identity=33.4285714285714, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17510307, Length=370, Percent_Identity=32.1621621621622, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17510309, Length=370, Percent_Identity=32.1621621621622, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=32.8804347826087, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71995514, Length=370, Percent_Identity=32.1621621621622, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI115533224, Length=346, Percent_Identity=32.9479768786127, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71999646, Length=350, Percent_Identity=30.2857142857143, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71999644, Length=350, Percent_Identity=30.2857142857143, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17507945, Length=362, Percent_Identity=31.767955801105, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=30.7086614173228, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71982858, Length=363, Percent_Identity=28.3746556473829, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17509811, Length=390, Percent_Identity=29.4871794871795, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=30.5405405405405, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17507641, Length=402, Percent_Identity=29.6019900497512, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17507881, Length=350, Percent_Identity=32.8571428571429, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17507879, Length=376, Percent_Identity=30.3191489361702, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71990816, Length=388, Percent_Identity=30.1546391752577, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17553716, Length=336, Percent_Identity=27.9761904761905, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI32564046, Length=381, Percent_Identity=30.1837270341207, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17536099, Length=388, Percent_Identity=30.9278350515464, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17536101, Length=388, Percent_Identity=30.9278350515464, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17536103, Length=389, Percent_Identity=31.6195372750643, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17505370, Length=370, Percent_Identity=28.6486486486486, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI193208216, Length=369, Percent_Identity=29.2682926829268, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI25148203, Length=456, Percent_Identity=24.1228070175439, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI17508543, Length=369, Percent_Identity=26.8292682926829, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17556951, Length=371, Percent_Identity=26.9541778975741, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71982862, Length=211, Percent_Identity=32.2274881516588, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI71997889, Length=348, Percent_Identity=26.7241379310345, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25148291, Length=369, Percent_Identity=21.9512195121951, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17557982, Length=407, Percent_Identity=25.3071253071253, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI25145561, Length=368, Percent_Identity=24.1847826086957, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71987152, Length=95, Percent_Identity=34.7368421052632, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324217, Length=363, Percent_Identity=34.1597796143251, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6324778, Length=367, Percent_Identity=32.1525885558583, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6321856, Length=362, Percent_Identity=34.8066298342541, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6321360, Length=398, Percent_Identity=31.6582914572864, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6320224, Length=324, Percent_Identity=34.2592592592593, Blast_Score=202, Evalue=8e-53, Organism=Saccharomyces cerevisiae, GI6325138, Length=357, Percent_Identity=32.4929971988796, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6324620, Length=357, Percent_Identity=34.733893557423, Blast_Score=196, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6323021, Length=352, Percent_Identity=34.6590909090909, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6320041, Length=358, Percent_Identity=29.8882681564246, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=376, Percent_Identity=32.1808510638298, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6321111, Length=387, Percent_Identity=31.266149870801, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6320449, Length=385, Percent_Identity=33.2467532467532, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6321963, Length=382, Percent_Identity=30.3664921465969, Blast_Score=173, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6320173, Length=409, Percent_Identity=29.3398533007335, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6320119, Length=363, Percent_Identity=27.2727272727273, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=357, Percent_Identity=28.5714285714286, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6322912, Length=336, Percent_Identity=30.6547619047619, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6322323, Length=336, Percent_Identity=30.6547619047619, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6323947, Length=352, Percent_Identity=31.8181818181818, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6319618, Length=470, Percent_Identity=28.2978723404255, Blast_Score=158, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=370, Percent_Identity=31.6216216216216, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6320400, Length=368, Percent_Identity=29.8913043478261, Blast_Score=146, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6323306, Length=409, Percent_Identity=25.9168704156479, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6322876, Length=217, Percent_Identity=32.258064516129, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6324366, Length=395, Percent_Identity=25.3164556962025, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6321374, Length=393, Percent_Identity=22.3918575063613, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24584994, Length=368, Percent_Identity=35.054347826087, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI21355075, Length=358, Percent_Identity=34.6368715083799, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24585582, Length=359, Percent_Identity=34.5403899721448, Blast_Score=205, Evalue=5e-53, Organism=Drosophila melanogaster, GI24662330, Length=359, Percent_Identity=33.1476323119777, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI28574962, Length=364, Percent_Identity=32.6923076923077, Blast_Score=201, Evalue=7e-52, Organism=Drosophila melanogaster, GI18857967, Length=369, Percent_Identity=32.2493224932249, Blast_Score=201, Evalue=9e-52, Organism=Drosophila melanogaster, GI17985987, Length=374, Percent_Identity=31.5508021390374, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=34.2776203966006, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24642151, Length=332, Percent_Identity=35.8433734939759, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI24644483, Length=358, Percent_Identity=30.7262569832402, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24644479, Length=358, Percent_Identity=30.7262569832402, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24644487, Length=358, Percent_Identity=30.7262569832402, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI45551833, Length=358, Percent_Identity=30.7262569832402, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24644485, Length=358, Percent_Identity=30.7262569832402, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI281361218, Length=358, Percent_Identity=30.7262569832402, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24644481, Length=358, Percent_Identity=30.7262569832402, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24645031, Length=320, Percent_Identity=32.1875, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI21356161, Length=358, Percent_Identity=34.0782122905028, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI17136814, Length=356, Percent_Identity=33.7078651685393, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI24583281, Length=349, Percent_Identity=32.6647564469914, Blast_Score=188, Evalue=6e-48, Organism=Drosophila melanogaster, GI24583279, Length=349, Percent_Identity=32.6647564469914, Blast_Score=188, Evalue=6e-48, Organism=Drosophila melanogaster, GI28575014, Length=346, Percent_Identity=31.5028901734104, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=30.5322128851541, Blast_Score=187, Evalue=9e-48, Organism=Drosophila melanogaster, GI24581954, Length=364, Percent_Identity=29.1208791208791, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24581952, Length=364, Percent_Identity=29.1208791208791, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24581956, Length=364, Percent_Identity=29.1208791208791, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24582080, Length=308, Percent_Identity=31.8181818181818, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI24582078, Length=308, Percent_Identity=31.8181818181818, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI17136248, Length=308, Percent_Identity=31.8181818181818, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI24582075, Length=308, Percent_Identity=31.8181818181818, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI17647335, Length=352, Percent_Identity=31.25, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI28571808, Length=365, Percent_Identity=30.958904109589, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI28571809, Length=365, Percent_Identity=30.958904109589, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24642822, Length=401, Percent_Identity=30.9226932668329, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI281365720, Length=319, Percent_Identity=30.7210031347962, Blast_Score=161, Evalue=7e-40, Organism=Drosophila melanogaster, GI24666101, Length=357, Percent_Identity=29.1316526610644, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24668515, Length=332, Percent_Identity=28.6144578313253, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI18859659, Length=433, Percent_Identity=25.4041570438799, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI28571338, Length=433, Percent_Identity=25.4041570438799, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24643725, Length=391, Percent_Identity=24.2966751918159, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI20130173, Length=437, Percent_Identity=26.5446224256293, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI21355559, Length=358, Percent_Identity=28.2122905027933, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI17136666, Length=412, Percent_Identity=26.2135922330097, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI19920478, Length=338, Percent_Identity=25.1479289940828, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=24.4252873563218, Blast_Score=106, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50881; Mature: 50881
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSFQQFKLLPFMVDALTEKRITKPTDIQARIIPAALNGRDIIGKSQTGTGKTLAFLLPI CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH VEAINPEDASVQAIVVAPTRELAWQIHEELKSILIKNPDYIKSSLIVGGTDRERQIDKMK HHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHCEEECCCCHHHHHHHHC NPPQLIIGTPGRILDLMKAQALFPHKVTHFVVDEADQMLDMGFLPEVDRIAQALPEKLQT CCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH MVFSATIPENLEPFLKKYLHDPRFAEASPEHRVAPKIKHHVIPVRHRDRKELTVEIAKAI HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHC NPFVCLVFTNTKQEADELETSFREAGLNVGTLHGDMQARRRKQAIKDINDAKYQYVIATD CCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEH LAARGIDISGVSHVINHGIPKDLDFYTHRVGRTGRAGASGEAYTLYEDHENGPINRLEER HHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHC GFEFTHVDLRNGSIQPIKTRRRRQTDRKMKVSHTAHSRMAGEIKKAKKKVKPGYKKKFKY CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KLKETASREHMQQQRSDRRAARKKNKR HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNSFQQFKLLPFMVDALTEKRITKPTDIQARIIPAALNGRDIIGKSQTGTGKTLAFLLPI CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH VEAINPEDASVQAIVVAPTRELAWQIHEELKSILIKNPDYIKSSLIVGGTDRERQIDKMK HHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHCEEECCCCHHHHHHHHC NPPQLIIGTPGRILDLMKAQALFPHKVTHFVVDEADQMLDMGFLPEVDRIAQALPEKLQT CCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH MVFSATIPENLEPFLKKYLHDPRFAEASPEHRVAPKIKHHVIPVRHRDRKELTVEIAKAI HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHC NPFVCLVFTNTKQEADELETSFREAGLNVGTLHGDMQARRRKQAIKDINDAKYQYVIATD CCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEH LAARGIDISGVSHVINHGIPKDLDFYTHRVGRTGRAGASGEAYTLYEDHENGPINRLEER HHHCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHC GFEFTHVDLRNGSIQPIKTRRRRQTDRKMKVSHTAHSRMAGEIKKAKKKVKPGYKKKFKY CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KLKETASREHMQQQRSDRRAARKKNKR HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]