| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ppk
Identifier: 229916309
GI number: 229916309
Start: 527980
End: 530145
Strand: Direct
Name: ppk
Synonym: EAT1b_0578
Alternate gene names: 229916309
Gene position: 527980-530145 (Clockwise)
Preceding gene: 229916308
Following gene: 229916310
Centisome position: 17.6
GC content: 45.43
Gene sequence:
>2166_bases ATGTCCGAATATACGAATGAACATTTTAACAACCGTGAACTCAGCTGGCTCGACTTTAACGAGCGTGTCCTCGAGGAGGC GATGGATGAACGAAATCCATTGATGGAACGATTGAAATTTTTGGCGATTTTCAGTTCTAACCTTGATGAATTTTATATGG TACGAGTCGGTGGATTGAAAGATGAGGTCCTCGCCGGGTTCAATCGTCCGGAAGACAAGACGGGCCTCACTCCAAAACAG CAGATCAAGTCCATTTCGATGCGAGCGCAAGAACTCGTCGAGACGCAATATGCGACATATAAAAAAATCACGAAACAGTT ATCGAATCAGCACGTTCGCTTCTTAAGGACGAAACATTTGAACAAGACCCAACAAGACTTCGTGAAAGAGTATTTTCGAA CGCACGTATTCCCTGTCCTGACGCCGATTGCAGTCGACGCCTATCGTCCGTTCCCAATGCTCTTATCTAAGTCACTGAAC ATTGCTGTCGAGATTGCCTCGAATGGCGAAGGAAAAAAACGACTCGCCCTCGTTCAAGTGCCATCCGTTCTTCCGCGGTA TCTGGAACTACCTACCGATGATGAAGAACATACCGATTTGATTTTACTTGAGGATTTGATCATTCAATTCATCGACTCAC TCTTCAAAGGATTTGTCGTCGAGTCCACGATGCCTTTCCGAATTACGCGGAACGCGGACATGCCGTTTCACGAAGAGGGC AGTCGTGACGTCTTGAAACAAATCGAAAAAGAATTGAAGAAGAGAAGATATGGGGTTGCCATCCGACTCGAGGTACAGCA ACGATCGTTACGAAAAGAACTGTTGTTCATGCTACAAGACGTCCTTGACTTACATGACCGGGATATCTTTATTGTCGACG GTCCGATCGACTTGACCTTCCTGTTTGGGATCTACAATCAGATCGGGATGGAATATGATGACATGATCAATGAAACGTTG ATCCCATTTATCCCAGAAGGTCTTGAATCGGGCAAAGATTTATTCCAAAGTATCGCTAAACAGGATTATCTGCTCCATCA CCCGTATCATTCATTCGATCCAATCGTCCGTTTTATCGTTCAAGCCGCCAAAGACCCGAACGTCTTGGCAATCAAGCAGA CACTCTATCGCGTCTCCGGGGACTCTCCCATCATCAAAGCCTTGACTGATGCAGCCGAGAGCGGAAAACAAGTCACTGTC CTCGTCGAACTAAAAGCACGTTTTGATGAAGAAAAAAACATTCAATGGGCGAAGCAACTTGAGAAAGCCGGAGCTCATGT CATCTACGGCTATAAAGAACTGAAGACACACTCAAAAATCACCCTCGTCGTTCGCATTCTAGAAGGTGGTGTGTTGCAAC GGTTCATTCATCTTGGTACCGGTAACTATAACGATTCGACCGCCAAGCTATACACAGACATTGGGCTCCTCACCACAAAT GAAGAACTCGCTGAAGATGCAACGAACTTTTTCAACTGGTTATCCGGTTATGGGGAACGACCATCTTGGCATCAGTTCGA GACGTCGCCTGACGACATGAAAGACTTCTTCTTGAATAAAATCGATGATGAGATCAAACTGCATGAAAAGTACGGCAACG GTCGCATCGTCGCTAAGATGAACTCGATCACGGACCGGGCCATCATCACAAAATTGTATGATGCTTCGTCCGCGGGAGTG AAAATCGATTTGATTGTCCGAGGCATTTGTTGCTTACGACCGGGAATTAAAGGGGTCTCTGAAAACATCAAGGTCATCTC GATCATCGACCGTTATCTCGAACATTCCCGAATCTTTTATTTTTACCAAAATGGAAAAGAAGACTTGTACTGTTCCTCTG CGGACTGGATGACACGAAATATGAAAAAACGGATCGAGATACTCTTCCCTATCTTGAACGCATCACATAAAACATACATC AAAGATATGATGGCCCTTCAACTCGTCGATAATGTGAAAGCAAGAAGACAACGTTCTGACGGCCGCTATGTATACGTGAA ACGTGAGACCAACGAGGAAGAGATTCAATCTCAAATTATCATCCATCAATATACGGGTGGTCGATGGAACAACATACCTA GCGTATTCGAACGAGAACCGTCAAATTGGGCGGAACGCGAAGTGCTCCGCCTTCGGGCCGAGAACGAGAAAATGACAGAT GACTGA
Upstream 100 bases:
>100_bases CCGCACGTTTTGAGTTGCAGCGAAGCACTCGCCATAAAAAGCATTTAGAGCGCGCAATTGATCAATCGATTGAGATTGTC TTGAGCGAGGAGGAGTAACC
Downstream 100 bases:
>100_bases TGTTAGACTTCTCAAATAAGAAAACTCGTTGTATAATAAATTCGATTCAGTTATTATGAAGCGCTTTCATTTAGAGACGG AGGAATTATTTATGCAGGAG
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase
Number of amino acids: Translated: 721; Mature: 720
Protein sequence:
>721_residues MSEYTNEHFNNRELSWLDFNERVLEEAMDERNPLMERLKFLAIFSSNLDEFYMVRVGGLKDEVLAGFNRPEDKTGLTPKQ QIKSISMRAQELVETQYATYKKITKQLSNQHVRFLRTKHLNKTQQDFVKEYFRTHVFPVLTPIAVDAYRPFPMLLSKSLN IAVEIASNGEGKKRLALVQVPSVLPRYLELPTDDEEHTDLILLEDLIIQFIDSLFKGFVVESTMPFRITRNADMPFHEEG SRDVLKQIEKELKKRRYGVAIRLEVQQRSLRKELLFMLQDVLDLHDRDIFIVDGPIDLTFLFGIYNQIGMEYDDMINETL IPFIPEGLESGKDLFQSIAKQDYLLHHPYHSFDPIVRFIVQAAKDPNVLAIKQTLYRVSGDSPIIKALTDAAESGKQVTV LVELKARFDEEKNIQWAKQLEKAGAHVIYGYKELKTHSKITLVVRILEGGVLQRFIHLGTGNYNDSTAKLYTDIGLLTTN EELAEDATNFFNWLSGYGERPSWHQFETSPDDMKDFFLNKIDDEIKLHEKYGNGRIVAKMNSITDRAIITKLYDASSAGV KIDLIVRGICCLRPGIKGVSENIKVISIIDRYLEHSRIFYFYQNGKEDLYCSSADWMTRNMKKRIEILFPILNASHKTYI KDMMALQLVDNVKARRQRSDGRYVYVKRETNEEEIQSQIIIHQYTGGRWNNIPSVFEREPSNWAEREVLRLRAENEKMTD D
Sequences:
>Translated_721_residues MSEYTNEHFNNRELSWLDFNERVLEEAMDERNPLMERLKFLAIFSSNLDEFYMVRVGGLKDEVLAGFNRPEDKTGLTPKQ QIKSISMRAQELVETQYATYKKITKQLSNQHVRFLRTKHLNKTQQDFVKEYFRTHVFPVLTPIAVDAYRPFPMLLSKSLN IAVEIASNGEGKKRLALVQVPSVLPRYLELPTDDEEHTDLILLEDLIIQFIDSLFKGFVVESTMPFRITRNADMPFHEEG SRDVLKQIEKELKKRRYGVAIRLEVQQRSLRKELLFMLQDVLDLHDRDIFIVDGPIDLTFLFGIYNQIGMEYDDMINETL IPFIPEGLESGKDLFQSIAKQDYLLHHPYHSFDPIVRFIVQAAKDPNVLAIKQTLYRVSGDSPIIKALTDAAESGKQVTV LVELKARFDEEKNIQWAKQLEKAGAHVIYGYKELKTHSKITLVVRILEGGVLQRFIHLGTGNYNDSTAKLYTDIGLLTTN EELAEDATNFFNWLSGYGERPSWHQFETSPDDMKDFFLNKIDDEIKLHEKYGNGRIVAKMNSITDRAIITKLYDASSAGV KIDLIVRGICCLRPGIKGVSENIKVISIIDRYLEHSRIFYFYQNGKEDLYCSSADWMTRNMKKRIEILFPILNASHKTYI KDMMALQLVDNVKARRQRSDGRYVYVKRETNEEEIQSQIIIHQYTGGRWNNIPSVFEREPSNWAEREVLRLRAENEKMTD D >Mature_720_residues SEYTNEHFNNRELSWLDFNERVLEEAMDERNPLMERLKFLAIFSSNLDEFYMVRVGGLKDEVLAGFNRPEDKTGLTPKQQ IKSISMRAQELVETQYATYKKITKQLSNQHVRFLRTKHLNKTQQDFVKEYFRTHVFPVLTPIAVDAYRPFPMLLSKSLNI AVEIASNGEGKKRLALVQVPSVLPRYLELPTDDEEHTDLILLEDLIIQFIDSLFKGFVVESTMPFRITRNADMPFHEEGS RDVLKQIEKELKKRRYGVAIRLEVQQRSLRKELLFMLQDVLDLHDRDIFIVDGPIDLTFLFGIYNQIGMEYDDMINETLI PFIPEGLESGKDLFQSIAKQDYLLHHPYHSFDPIVRFIVQAAKDPNVLAIKQTLYRVSGDSPIIKALTDAAESGKQVTVL VELKARFDEEKNIQWAKQLEKAGAHVIYGYKELKTHSKITLVVRILEGGVLQRFIHLGTGNYNDSTAKLYTDIGLLTTNE ELAEDATNFFNWLSGYGERPSWHQFETSPDDMKDFFLNKIDDEIKLHEKYGNGRIVAKMNSITDRAIITKLYDASSAGVK IDLIVRGICCLRPGIKGVSENIKVISIIDRYLEHSRIFYFYQNGKEDLYCSSADWMTRNMKKRIEILFPILNASHKTYIK DMMALQLVDNVKARRQRSDGRYVYVKRETNEEEIQSQIIIHQYTGGRWNNIPSVFEREPSNWAEREVLRLRAENEKMTDD
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family
Homologues:
Organism=Escherichia coli, GI1788847, Length=684, Percent_Identity=34.5029239766082, Blast_Score=399, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPK_EXISA (C4L3Y8)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002884955.1 - GeneID: 7871317 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_0578 - OMA: NYHAGNA - ProtClustDB: PRK05443 - HAMAP: MF_00347 - InterPro: IPR003414 - PIRSF: PIRSF015589 - TIGRFAMs: TIGR03705
Pfam domain/function: PF02503 PP_kinase
EC number: =2.7.4.1
Molecular weight: Translated: 83774; Mature: 83643
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: ACT_SITE 437-437 ACT_SITE 457-457
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYTNEHFNNRELSWLDFNERVLEEAMDERNPLMERLKFLAIFSSNLDEFYMVRVGGLK CCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCH DEVLAGFNRPEDKTGLTPKQQIKSISMRAQELVETQYATYKKITKQLSNQHVRFLRTKHL HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NKTQQDFVKEYFRTHVFPVLTPIAVDAYRPFPMLLSKSLNIAVEIASNGEGKKRLALVQV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCEEEEEEC PSVLPRYLELPTDDEEHTDLILLEDLIIQFIDSLFKGFVVESTMPFRITRNADMPFHEEG HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCEEEECCCCCCCCCCC SRDVLKQIEKELKKRRYGVAIRLEVQQRSLRKELLFMLQDVLDLHDRDIFIVDGPIDLTF CHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH LFGIYNQIGMEYDDMINETLIPFIPEGLESGKDLFQSIAKQDYLLHHPYHSFDPIVRFIV HHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHH QAAKDPNVLAIKQTLYRVSGDSPIIKALTDAAESGKQVTVLVELKARFDEEKNIQWAKQL HHCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEEHHCCCCCCCHHHHHH EKAGAHVIYGYKELKTHSKITLVVRILEGGVLQRFIHLGTGNYNDSTAKLYTDIGLLTTN HHCCCEEEECHHHHCCCCHHEEHHHHHHCHHHHHHHHHCCCCCCCCHHEEEEECCEEECC EELAEDATNFFNWLSGYGERPSWHQFETSPDDMKDFFLNKIDDEIKLHEKYGNGRIVAKM HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHEEHEECCCCEEEEEE NSITDRAIITKLYDASSAGVKIDLIVRGICCLRPGIKGVSENIKVISIIDRYLEHSRIFY CCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHCCEEEE FYQNGKEDLYCSSADWMTRNMKKRIEILFPILNASHKTYIKDMMALQLVDNVKARRQRSD EEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC GRYVYVKRETNEEEIQSQIIIHQYTGGRWNNIPSVFEREPSNWAEREVLRLRAENEKMTD CCEEEEEECCCHHHHHHEEEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCC D C >Mature Secondary Structure SEYTNEHFNNRELSWLDFNERVLEEAMDERNPLMERLKFLAIFSSNLDEFYMVRVGGLK CCCCCCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCH DEVLAGFNRPEDKTGLTPKQQIKSISMRAQELVETQYATYKKITKQLSNQHVRFLRTKHL HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NKTQQDFVKEYFRTHVFPVLTPIAVDAYRPFPMLLSKSLNIAVEIASNGEGKKRLALVQV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCEEEEEEC PSVLPRYLELPTDDEEHTDLILLEDLIIQFIDSLFKGFVVESTMPFRITRNADMPFHEEG HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCEEEECCCCCCCCCCC SRDVLKQIEKELKKRRYGVAIRLEVQQRSLRKELLFMLQDVLDLHDRDIFIVDGPIDLTF CHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH LFGIYNQIGMEYDDMINETLIPFIPEGLESGKDLFQSIAKQDYLLHHPYHSFDPIVRFIV HHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHH QAAKDPNVLAIKQTLYRVSGDSPIIKALTDAAESGKQVTVLVELKARFDEEKNIQWAKQL HHCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEEHHCCCCCCCHHHHHH EKAGAHVIYGYKELKTHSKITLVVRILEGGVLQRFIHLGTGNYNDSTAKLYTDIGLLTTN HHCCCEEEECHHHHCCCCHHEEHHHHHHCHHHHHHHHHCCCCCCCCHHEEEEECCEEECC EELAEDATNFFNWLSGYGERPSWHQFETSPDDMKDFFLNKIDDEIKLHEKYGNGRIVAKM HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHEEHEECCCCEEEEEE NSITDRAIITKLYDASSAGVKIDLIVRGICCLRPGIKGVSENIKVISIIDRYLEHSRIFY CCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHCCEEEE FYQNGKEDLYCSSADWMTRNMKKRIEILFPILNASHKTYIKDMMALQLVDNVKARRQRSD EEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC GRYVYVKRETNEEEIQSQIIIHQYTGGRWNNIPSVFEREPSNWAEREVLRLRAENEKMTD CCEEEEEECCCHHHHHHEEEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA