| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ispG
Identifier: 229916302
GI number: 229916302
Start: 520992
End: 522113
Strand: Direct
Name: ispG
Synonym: EAT1b_0571
Alternate gene names: 229916302
Gene position: 520992-522113 (Clockwise)
Preceding gene: 229916300
Following gene: 229916303
Centisome position: 17.37
GC content: 49.29
Gene sequence:
>1122_bases ATGTCAGAAATTTTGCATCGTTCATTAACACGTCCGGTCCGCGTCGGTAACTTGATTATCGGAGGATCGAACGAAGTCAT TATTCAATCTATGACCACTACGAAAACGCATGACGTCGAGGCGACAGTCGCCGAGATCAAACGTCTTGAAGAAGCTGGTT GCCAAGTCGTTCGCGTGGCTTGTCCAGACGAACGTGCAGCTGACGCACTTGCAGAAATTAAGAGCCGCATCAACATCCCG CTCGTCGTCGACATTCATTTCGACTACAAGCTTGCTTTAAAAGCCATCGAAAGTGGCGTCGATAAAATCCGGATCAACCC GGGTAACATCGGCCGCCGTGAGAAAGTAGAGGCCGTCGTCAACGCGGCGAAAGCAAAAGGGATCCCAATTCGAATCGGGG TCAACGCCGGTTCATTAGAAAAACAATTCCTTGAAAAGTATGGATATCCGACCGCGCAAGGTATGGTCGAGAGTGCGATG CACCACGTGAAGATTCTCGAGGACCTAGGCTTCTACAACACGATCATCTCGCTCAAAGCTTCAGACGTAAACCTTGCTCT TGAAGCCTACACGCTCGCTGCGAAGACGTTCGATTACCCACTTCACGTCGGAATCACAGAGTCAGGTCCACTCTTCTCCG GTTCACTCAAATCGGCTGCGGGACTCGGTGCGATTCTGTCTCTTGGAATCGGTTCAACGGTTCGGGTCTCACTTTCAGAT GACCCGGTTGAAGAAGTAAAAGTTGCGAAAGAAGTGCTCAAGTCATTCGGACTTGCGGCAAATGCCGCGACTTTGATCTC TTGTCCGACATGCGGACGAATTGAAATTGATTTGATTTCGATTGCAAAAGAGGTAGAAGAATACATCCAAAACATCAACG TCAACATTAAAGTCGCCGTTCTCGGATGTGCGGTAAACGGACCAGGTGAGGCTCGTGAAGCAGACATTGGAATCGCAGGC GCACGTAATGAAGGACTTCTCTTCCGTCACGGAAAGATTATCCGCAAAGTGCCTGAGGCGACGATGGTCGAAGAATTGAA AAAAGAAATCGATGCGATCGCCGCTGAAAAAATGGCGGAACGTGAGCGCGAAGAACAAGAGCTCGCAAACCAATCAAATT AA
Upstream 100 bases:
>100_bases GCATCCTAGATGCTTTTTCACATTCTTTTCGTTATGATAATGAAGAAACCTTATCATCTTAAATCGATTGGATTCTTTCC AAAAGAAGGAGATTACGTAT
Downstream 100 bases:
>100_bases TGAATCTCATGCCCGTACGGTTGCAACCGTACGGGTTTTTGATAGAATAGAGGGCATGTGAGGAGGAGTGATGAGATGCG AATCGGCATTGATTTGGATG
Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MSEILHRSLTRPVRVGNLIIGGSNEVIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVACPDERAADALAEIKSRINIP LVVDIHFDYKLALKAIESGVDKIRINPGNIGRREKVEAVVNAAKAKGIPIRIGVNAGSLEKQFLEKYGYPTAQGMVESAM HHVKILEDLGFYNTIISLKASDVNLALEAYTLAAKTFDYPLHVGITESGPLFSGSLKSAAGLGAILSLGIGSTVRVSLSD DPVEEVKVAKEVLKSFGLAANAATLISCPTCGRIEIDLISIAKEVEEYIQNINVNIKVAVLGCAVNGPGEAREADIGIAG ARNEGLLFRHGKIIRKVPEATMVEELKKEIDAIAAEKMAEREREEQELANQSN
Sequences:
>Translated_373_residues MSEILHRSLTRPVRVGNLIIGGSNEVIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVACPDERAADALAEIKSRINIP LVVDIHFDYKLALKAIESGVDKIRINPGNIGRREKVEAVVNAAKAKGIPIRIGVNAGSLEKQFLEKYGYPTAQGMVESAM HHVKILEDLGFYNTIISLKASDVNLALEAYTLAAKTFDYPLHVGITESGPLFSGSLKSAAGLGAILSLGIGSTVRVSLSD DPVEEVKVAKEVLKSFGLAANAATLISCPTCGRIEIDLISIAKEVEEYIQNINVNIKVAVLGCAVNGPGEAREADIGIAG ARNEGLLFRHGKIIRKVPEATMVEELKKEIDAIAAEKMAEREREEQELANQSN >Mature_372_residues SEILHRSLTRPVRVGNLIIGGSNEVIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVACPDERAADALAEIKSRINIPL VVDIHFDYKLALKAIESGVDKIRINPGNIGRREKVEAVVNAAKAKGIPIRIGVNAGSLEKQFLEKYGYPTAQGMVESAMH HVKILEDLGFYNTIISLKASDVNLALEAYTLAAKTFDYPLHVGITESGPLFSGSLKSAAGLGAILSLGIGSTVRVSLSDD PVEEVKVAKEVLKSFGLAANAATLISCPTCGRIEIDLISIAKEVEEYIQNINVNIKVAVLGCAVNGPGEAREADIGIAGA RNEGLLFRHGKIIRKVPEATMVEELKKEIDAIAAEKMAEREREEQELANQSN
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
COG id: COG0821
COG function: function code I; Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family
Homologues:
Organism=Escherichia coli, GI1788863, Length=365, Percent_Identity=48.4931506849315, Blast_Score=340, Evalue=8e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ISPG_EXISA (C4L3K5)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002884948.1 - GeneID: 7871310 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_0571 - OMA: IRIAINS - ProtClustDB: PRK00366 - HAMAP: MF_00159 - InterPro: IPR013785 - InterPro: IPR011005 - InterPro: IPR016425 - InterPro: IPR004588 - Gene3D: G3DSA:3.20.20.70 - PIRSF: PIRSF004640 - TIGRFAMs: TIGR00612
Pfam domain/function: PF04551 GcpE; SSF51717 DHP_synth_like
EC number: =1.17.7.1
Molecular weight: Translated: 40140; Mature: 40009
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEILHRSLTRPVRVGNLIIGGSNEVIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVA CCHHHHHHHCCCEEECEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEE CPDERAADALAEIKSRINIPLVVDIHFDYKLALKAIESGVDKIRINPGNIGRREKVEAVV CCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH NAAKAKGIPIRIGVNAGSLEKQFLEKYGYPTAQGMVESAMHHVKILEDLGFYNTIISLKA HHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEEE SDVNLALEAYTLAAKTFDYPLHVGITESGPLFSGSLKSAAGLGAILSLGIGSTVRVSLSD CCCEEEEEHEEEHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC DPVEEVKVAKEVLKSFGLAANAATLISCPTCGRIEIDLISIAKEVEEYIQNINVNIKVAV CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCEEEEEE LGCAVNGPGEAREADIGIAGARNEGLLFRHGKIIRKVPEATMVEELKKEIDAIAAEKMAE EEEEECCCCCCCCCCEEEECCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH REREEQELANQSN HHHHHHHHHCCCC >Mature Secondary Structure SEILHRSLTRPVRVGNLIIGGSNEVIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVA CHHHHHHHCCCEEECEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEE CPDERAADALAEIKSRINIPLVVDIHFDYKLALKAIESGVDKIRINPGNIGRREKVEAVV CCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH NAAKAKGIPIRIGVNAGSLEKQFLEKYGYPTAQGMVESAMHHVKILEDLGFYNTIISLKA HHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEEE SDVNLALEAYTLAAKTFDYPLHVGITESGPLFSGSLKSAAGLGAILSLGIGSTVRVSLSD CCCEEEEEHEEEHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC DPVEEVKVAKEVLKSFGLAANAATLISCPTCGRIEIDLISIAKEVEEYIQNINVNIKVAV CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCEEEEEE LGCAVNGPGEAREADIGIAGARNEGLLFRHGKIIRKVPEATMVEELKKEIDAIAAEKMAE EEEEECCCCCCCCCCEEEECCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH REREEQELANQSN HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA