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The map label for this gene is mcp2 [H]

Identifier: 229916301

GI number: 229916301

Start: 519079

End: 520779

Strand: Reverse

Name: mcp2 [H]

Synonym: EAT1b_0570

Alternate gene names: 229916301

Gene position: 520779-519079 (Counterclockwise)

Preceding gene: 229916304

Following gene: 229916299

Centisome position: 17.36

GC content: 45.56

Gene sequence:

>1701_bases
GTGAAGTGGAACTTTAAACGAAATCCAATCAAGAGGAAGAGACCGTTGAACGAGGCACGTCAGTATCCTAAATTGGCCCA
CCGACTCCAGTGGACGCTCATGCCGATTGTCTTACTCGTATTCGCGCTCACATTCGGGTGGTTCGCAATCAAATCTGAGC
AACTCTTGGCATCAGAAATCGAGCAACGGCTCATGCGAGAAGTCACTGTCATGCGAGAATCGATTAAAACGTCATATAGT
GCCTACGTTGCGAATGAGAAACAGTTGGCACGCTCGCTGAAGTCAGCCTATATGCAACAGGCTTCAATCTTATCGGGGGA
TGAGTTTGATGCGGCACAATTTTTAGTGCGTGATCAAGCAATTGAACAGCTGACCGGGAAGGAAAGCATAGTGGCAGAGA
AATTGATCGGCAAGTTGTCGAACAGTTCTGAAGCGGAAGTGAAAGAAACTGAAACGTTATTAGTGGCTTCTGTCCCGATA
CCTGAACTAAAAGCGGATTACGTCCTTGTCGTTACGAAAGAATCAGTTTTGGGTCCGATGAGTTCGCTACGCCAACATAT
CGCCTTCATCGTATTGATTGCGATGGTTGGCGTGATGGTCCTCTTCACACGGTTGATTCACCGTGAAGTGAAACCACTCA
GTGTGTTGGCTGATTCGTTACGAAATGCCGTGGCATCACGCCGATTCGATGATGTCACACTTGAATCGAAGTCAAAAGAG
ATTCATATGTTAGAAACAGAGTTCAATGCGTTCATCACGCTTTGGAATCAATCGATGTCCATGATGGGAAAAACGGCAAC
GGCGTTCAATCAAAGCTTACCTGTCTTTAAACAAGAATTACGTAACAGTCACGAACAGGTGGAGCAGTTTCGGGAAGTGG
CGGCAACGGTTGAATCGACGAGCTATTCATATCAATCGGTGACAAATGGCTCTACATCTAAAATGAAAGATCTGACGCGA
CAAATCGAAGCGCTTGAACAGCAAATCACGAGTGTGGACGAGCGAGGGAATCAATTGAAGTCTATTTTACATGAAGAACT
TGAGACGTTCTCTTCCGTAAGAGACGTGAGTGATTACGTCGAGAAACAAGTGGAGTCGATTCAGAGACGACTTCTTGAGA
GTGAGACGAATTCTTCGAAGGCAGATGTTGCGCTGAAAAGTATCTTATCCGTATCGGCGGCAACAAAGATGTTATCGTTA
AACGCATCGATTGAAGCGGCACGAGCAGGAGAGCACGGCAAAGGATTTGCTGTCGTTGCCAGCGAAGTGGGGAATTTGGC
GAAGATGACAAACGAATCGACGCTTTTAGCGGTCAGTGCCATCGAAGCATTAAACACAGAGCGAACGGAACTGCTATCTG
AAGTCAATGAATTCATTAAAGAAGTTCACCATTTAAAAGATGCCGTTAGTCGTGTCGAGTCAGGAATTGAAACCATCAAT
CGTGAGATAAAAGTACAGCTTGACGAATTTCAAGCGATTACGGTCCATACATCGAGTACGGGCCAGCAGCTGGTTCATTT
AATGGAATCGAATGAACAATTGCGCGAAATCAGTTCATTGCTTGAACGAAAATTGATTGAACTGAATACAGGTGTCGATC
GCTGGTCAGATGTTCAGCTTGCCCTTCAAGACGCGGGAACGAATCTTGGAGACCAAAGTGAAGCATTGAATCAGACGCTA
AAGGAACTGTCACCAACATAA

Upstream 100 bases:

>100_bases
TGCTCTTTACAAACTCTAACGCTATCTTAACATCTACTTCATAATTTTCCACCGTCTCAAGACCGATATATAGGCGAGAT
TAGAAAAAGAGGTGGCATCT

Downstream 100 bases:

>100_bases
AACAACGTCGGGCTCAAGAGGCCCGACGTTGTTTTAGTTGTGGTACTTTTGTTAGCGGAAAACTGATATAGCCGAGACCG
ATTATGAAGCCGAGGGTCAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MKWNFKRNPIKRKRPLNEARQYPKLAHRLQWTLMPIVLLVFALTFGWFAIKSEQLLASEIEQRLMREVTVMRESIKTSYS
AYVANEKQLARSLKSAYMQQASILSGDEFDAAQFLVRDQAIEQLTGKESIVAEKLIGKLSNSSEAEVKETETLLVASVPI
PELKADYVLVVTKESVLGPMSSLRQHIAFIVLIAMVGVMVLFTRLIHREVKPLSVLADSLRNAVASRRFDDVTLESKSKE
IHMLETEFNAFITLWNQSMSMMGKTATAFNQSLPVFKQELRNSHEQVEQFREVAATVESTSYSYQSVTNGSTSKMKDLTR
QIEALEQQITSVDERGNQLKSILHEELETFSSVRDVSDYVEKQVESIQRRLLESETNSSKADVALKSILSVSAATKMLSL
NASIEAARAGEHGKGFAVVASEVGNLAKMTNESTLLAVSAIEALNTERTELLSEVNEFIKEVHHLKDAVSRVESGIETIN
REIKVQLDEFQAITVHTSSTGQQLVHLMESNEQLREISSLLERKLIELNTGVDRWSDVQLALQDAGTNLGDQSEALNQTL
KELSPT

Sequences:

>Translated_566_residues
MKWNFKRNPIKRKRPLNEARQYPKLAHRLQWTLMPIVLLVFALTFGWFAIKSEQLLASEIEQRLMREVTVMRESIKTSYS
AYVANEKQLARSLKSAYMQQASILSGDEFDAAQFLVRDQAIEQLTGKESIVAEKLIGKLSNSSEAEVKETETLLVASVPI
PELKADYVLVVTKESVLGPMSSLRQHIAFIVLIAMVGVMVLFTRLIHREVKPLSVLADSLRNAVASRRFDDVTLESKSKE
IHMLETEFNAFITLWNQSMSMMGKTATAFNQSLPVFKQELRNSHEQVEQFREVAATVESTSYSYQSVTNGSTSKMKDLTR
QIEALEQQITSVDERGNQLKSILHEELETFSSVRDVSDYVEKQVESIQRRLLESETNSSKADVALKSILSVSAATKMLSL
NASIEAARAGEHGKGFAVVASEVGNLAKMTNESTLLAVSAIEALNTERTELLSEVNEFIKEVHHLKDAVSRVESGIETIN
REIKVQLDEFQAITVHTSSTGQQLVHLMESNEQLREISSLLERKLIELNTGVDRWSDVQLALQDAGTNLGDQSEALNQTL
KELSPT
>Mature_566_residues
MKWNFKRNPIKRKRPLNEARQYPKLAHRLQWTLMPIVLLVFALTFGWFAIKSEQLLASEIEQRLMREVTVMRESIKTSYS
AYVANEKQLARSLKSAYMQQASILSGDEFDAAQFLVRDQAIEQLTGKESIVAEKLIGKLSNSSEAEVKETETLLVASVPI
PELKADYVLVVTKESVLGPMSSLRQHIAFIVLIAMVGVMVLFTRLIHREVKPLSVLADSLRNAVASRRFDDVTLESKSKE
IHMLETEFNAFITLWNQSMSMMGKTATAFNQSLPVFKQELRNSHEQVEQFREVAATVESTSYSYQSVTNGSTSKMKDLTR
QIEALEQQITSVDERGNQLKSILHEELETFSSVRDVSDYVEKQVESIQRRLLESETNSSKADVALKSILSVSAATKMLSL
NASIEAARAGEHGKGFAVVASEVGNLAKMTNESTLLAVSAIEALNTERTELLSEVNEFIKEVHHLKDAVSRVESGIETIN
REIKVQLDEFQAITVHTSSTGQQLVHLMESNEQLREISSLLERKLIELNTGVDRWSDVQLALQDAGTNLGDQSEALNQTL
KELSPT

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 63465; Mature: 63465

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWNFKRNPIKRKRPLNEARQYPKLAHRLQWTLMPIVLLVFALTFGWFAIKSEQLLASEI
CCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQRLMREVTVMRESIKTSYSAYVANEKQLARSLKSAYMQQASILSGDEFDAAQFLVRDQA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IEQLTGKESIVAEKLIGKLSNSSEAEVKETETLLVASVPIPELKADYVLVVTKESVLGPM
HHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCCEEEEEECHHHHCHH
SSLRQHIAFIVLIAMVGVMVLFTRLIHREVKPLSVLADSLRNAVASRRFDDVTLESKSKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IHMLETEFNAFITLWNQSMSMMGKTATAFNQSLPVFKQELRNSHEQVEQFREVAATVEST
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SYSYQSVTNGSTSKMKDLTRQIEALEQQITSVDERGNQLKSILHEELETFSSVRDVSDYV
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKQVESIQRRLLESETNSSKADVALKSILSVSAATKMLSLNASIEAARAGEHGKGFAVVA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHH
SEVGNLAKMTNESTLLAVSAIEALNTERTELLSEVNEFIKEVHHLKDAVSRVESGIETIN
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REIKVQLDEFQAITVHTSSTGQQLVHLMESNEQLREISSLLERKLIELNTGVDRWSDVQL
HHHEEEEECEEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ALQDAGTNLGDQSEALNQTLKELSPT
HHHHCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKWNFKRNPIKRKRPLNEARQYPKLAHRLQWTLMPIVLLVFALTFGWFAIKSEQLLASEI
CCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQRLMREVTVMRESIKTSYSAYVANEKQLARSLKSAYMQQASILSGDEFDAAQFLVRDQA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IEQLTGKESIVAEKLIGKLSNSSEAEVKETETLLVASVPIPELKADYVLVVTKESVLGPM
HHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCCEEEEEECHHHHCHH
SSLRQHIAFIVLIAMVGVMVLFTRLIHREVKPLSVLADSLRNAVASRRFDDVTLESKSKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IHMLETEFNAFITLWNQSMSMMGKTATAFNQSLPVFKQELRNSHEQVEQFREVAATVEST
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SYSYQSVTNGSTSKMKDLTRQIEALEQQITSVDERGNQLKSILHEELETFSSVRDVSDYV
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKQVESIQRRLLESETNSSKADVALKSILSVSAATKMLSLNASIEAARAGEHGKGFAVVA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHH
SEVGNLAKMTNESTLLAVSAIEALNTERTELLSEVNEFIKEVHHLKDAVSRVESGIETIN
HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REIKVQLDEFQAITVHTSSTGQQLVHLMESNEQLREISSLLERKLIELNTGVDRWSDVQL
HHHEEEEECEEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ALQDAGTNLGDQSEALNQTLKELSPT
HHHHCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]