| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is aroK [H]
Identifier: 229916269
GI number: 229916269
Start: 490069
End: 490557
Strand: Reverse
Name: aroK [H]
Synonym: EAT1b_0538
Alternate gene names: 229916269
Gene position: 490557-490069 (Counterclockwise)
Preceding gene: 229916270
Following gene: 229916268
Centisome position: 16.35
GC content: 43.76
Gene sequence:
>489_bases ATGAATGATAACCCGTTTTATATCGTGGGGTTTATGGGTACAGGTAAATCTACCTTATTCTCGTTTCTGAAAGAATATGG GGAGGTCATCGATCTTGATTTAGTCATTGAGTCCATGACTGGGATGGAGATCGCTACATATTTTGACCGCTACGGTGAGT CTGCGTTTCGTGATGTTGAGTCAAAAGTACTGCAACAAGTCACTGCTGACTATATCCTGACCGGTGGTGGAGTGGTGGAA CGCTCTGAAAATATATGTTGGATGCGAGAACGTGGTACGATGATCCATTTAAATCTTCCGTTCGACATGTGTTGGGAACG AATCAAAGATTCTGCGCGGCCACTTGTTAAAAGAGGACGGGAGGATGTTCATGCGTTGTTTCAACGACGTGATCAATTAT ATCGAAAAGCGAGTGTATCCATCGATGCATCTCAATCGCCTGAAGACATCGCCAAGCAAATCATCCGTATAAAGGGGGAA AAAGTATGA
Upstream 100 bases:
>100_bases AAACCAACGGGAACTCTGACGTGTCGTCCGATTGCACCGAATCGTACTGAAGTGAATATCGTGCTAACATCTGGTGAACG GCATAAAGAGGTGATTGTTT
Downstream 100 bases:
>100_bases TTTGGATTAATTTTGCCATCATCGTATTTTCATTAATCGGACTTGGGATATATGGTTATCTCTTGTTCAAAAACAAAATG AAACCAGAATTTGGTCGTTT
Product: Shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MNDNPFYIVGFMGTGKSTLFSFLKEYGEVIDLDLVIESMTGMEIATYFDRYGESAFRDVESKVLQQVTADYILTGGGVVE RSENICWMRERGTMIHLNLPFDMCWERIKDSARPLVKRGREDVHALFQRRDQLYRKASVSIDASQSPEDIAKQIIRIKGE KV
Sequences:
>Translated_162_residues MNDNPFYIVGFMGTGKSTLFSFLKEYGEVIDLDLVIESMTGMEIATYFDRYGESAFRDVESKVLQQVTADYILTGGGVVE RSENICWMRERGTMIHLNLPFDMCWERIKDSARPLVKRGREDVHALFQRRDQLYRKASVSIDASQSPEDIAKQIIRIKGE KV >Mature_162_residues MNDNPFYIVGFMGTGKSTLFSFLKEYGEVIDLDLVIESMTGMEIATYFDRYGESAFRDVESKVLQQVTADYILTGGGVVE RSENICWMRERGTMIHLNLPFDMCWERIKDSARPLVKRGREDVHALFQRRDQLYRKASVSIDASQSPEDIAKQIIRIKGE KV
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=163, Percent_Identity=34.9693251533742, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1786587, Length=161, Percent_Identity=29.1925465838509, Blast_Score=68, Evalue=3e-13,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 18628; Mature: 18628
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDNPFYIVGFMGTGKSTLFSFLKEYGEVIDLDLVIESMTGMEIATYFDRYGESAFRDVE CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHH SKVLQQVTADYILTGGGVVERSENICWMRERGTMIHLNLPFDMCWERIKDSARPLVKRGR HHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCH EDVHALFQRRDQLYRKASVSIDASQSPEDIAKQIIRIKGEKV HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MNDNPFYIVGFMGTGKSTLFSFLKEYGEVIDLDLVIESMTGMEIATYFDRYGESAFRDVE CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHH SKVLQQVTADYILTGGGVVERSENICWMRERGTMIHLNLPFDMCWERIKDSARPLVKRGR HHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCH EDVHALFQRRDQLYRKASVSIDASQSPEDIAKQIIRIKGEKV HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]