| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916232
Identifier: 229916232
GI number: 229916232
Start: 455226
End: 456410
Strand: Reverse
Name: 229916232
Synonym: EAT1b_0501
Alternate gene names: NA
Gene position: 456410-455226 (Counterclockwise)
Preceding gene: 229916236
Following gene: 229916231
Centisome position: 15.21
GC content: 46.58
Gene sequence:
>1185_bases TTGGAATATAAAGCGTTACAAGAACGTCTCGCAGACGTCTTACAATCAAATCATCTCGTGTCGGCGACCATCAGTCAACC CCGTCAAAAATCTAGCGATCTCAGACGGATCAAATTGAAACCGGTCATGTTACGAAATGCGTATCATATCCAGTTCGAGT ATCAGTATGAGCGGGTGATGAACCATAAAAACTTGACACCAGATGAGGCCGTCACGGAAGTGAATGAGCTTCTCGAAACG TTCCGACAAGGACAGTTTCAGTTAAAGGATTCTGACCTCCAGTTCCAATTATCGAAAAAGTTCAAAGTGACGTTGAAAGA AAAGCAGACGGCTCAAAAAGAAGTTCAACTGAGCCACAATCGTGAAAAACAATATGTGCTCCCGCTCGACGAGCCAGTTC CGTTTCTCATTCGACTCGGCATTCAGTCAGCGGACGGGAAAGTGAAGCGTCAAAAGTACGACAAGTTTAAACAAATCAAC CGCTTCCTTGAGTTCATTGAGGACTCGCTTAAACACTTGCCGACAGACCGTACCGTCCGAATCTTGGATTTCGGTTCAGG GAAGTCGTATTTGACGTTTGCGCTCTATCATTTCCTTCATGAGATGAAAGGATATGACGTGCATATCACAGGACTCGATT TGAAGAAAGAGGTCATCGAAGAGTGTGCATCGATTGCGAAAGATCTTGGATATGAACGACTCGAATTCTTAGTCGGAGAC ATTAATGAATATGAAGGGGAAACAGCTGTTGACATGGTCGTGACTCTTCATGCATGTGACGTGGCGACCGATATGGCATT GGCACGTGCTGTCCGTTGGGGCGCGAAAGTCATCTTAAGCGTCCCGTGTTGTCAAAAGGAATTGAATCGTCAAATTCAAG CACCGAATCTGGATGTGATGCTTCAGCACGGATTGATCAAAGAACGGTTCGCGTCACTCGCGACCGATTCGATTCGGGCT GAACTGCTCGGTCTTGTCGGGTATGATGCCCAGCTGCTCGAATTCATCGACCTCGAGCACACCCCGAAAAATATCATGAT TCGTGCCTACTTGACGAACCGTCAGGCGACCGCTGAAACGAAGGCACGTTACCTTGCTTTCAAACAGATGTTAGGGGCAG ATCCGTTCTTAGAACGGGAATTGAGCGATAGACTTGTCCTCGAGGTAGAACAAGACGTAAAATAA
Upstream 100 bases:
>100_bases TATGTGTATCCTCCTTTGACGTAACGTCGTCTTCGTGTAATAGTATGTACGGATAGGTGAAACGATATGTTTCAAAATTT CTAAAAAAGGATTGAATCCA
Downstream 100 bases:
>100_bases GGGAGTATAGACGAAATGTCGAAAGGGGAAACAACATGGATTTTCAATTATATTTTCAAGATGTAGTCGAACAAGCGCGT AACGAAGTACGTGCTGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MEYKALQERLADVLQSNHLVSATISQPRQKSSDLRRIKLKPVMLRNAYHIQFEYQYERVMNHKNLTPDEAVTEVNELLET FRQGQFQLKDSDLQFQLSKKFKVTLKEKQTAQKEVQLSHNREKQYVLPLDEPVPFLIRLGIQSADGKVKRQKYDKFKQIN RFLEFIEDSLKHLPTDRTVRILDFGSGKSYLTFALYHFLHEMKGYDVHITGLDLKKEVIEECASIAKDLGYERLEFLVGD INEYEGETAVDMVVTLHACDVATDMALARAVRWGAKVILSVPCCQKELNRQIQAPNLDVMLQHGLIKERFASLATDSIRA ELLGLVGYDAQLLEFIDLEHTPKNIMIRAYLTNRQATAETKARYLAFKQMLGADPFLERELSDRLVLEVEQDVK
Sequences:
>Translated_394_residues MEYKALQERLADVLQSNHLVSATISQPRQKSSDLRRIKLKPVMLRNAYHIQFEYQYERVMNHKNLTPDEAVTEVNELLET FRQGQFQLKDSDLQFQLSKKFKVTLKEKQTAQKEVQLSHNREKQYVLPLDEPVPFLIRLGIQSADGKVKRQKYDKFKQIN RFLEFIEDSLKHLPTDRTVRILDFGSGKSYLTFALYHFLHEMKGYDVHITGLDLKKEVIEECASIAKDLGYERLEFLVGD INEYEGETAVDMVVTLHACDVATDMALARAVRWGAKVILSVPCCQKELNRQIQAPNLDVMLQHGLIKERFASLATDSIRA ELLGLVGYDAQLLEFIDLEHTPKNIMIRAYLTNRQATAETKARYLAFKQMLGADPFLERELSDRLVLEVEQDVK >Mature_394_residues MEYKALQERLADVLQSNHLVSATISQPRQKSSDLRRIKLKPVMLRNAYHIQFEYQYERVMNHKNLTPDEAVTEVNELLET FRQGQFQLKDSDLQFQLSKKFKVTLKEKQTAQKEVQLSHNREKQYVLPLDEPVPFLIRLGIQSADGKVKRQKYDKFKQIN RFLEFIEDSLKHLPTDRTVRILDFGSGKSYLTFALYHFLHEMKGYDVHITGLDLKKEVIEECASIAKDLGYERLEFLVGD INEYEGETAVDMVVTLHACDVATDMALARAVRWGAKVILSVPCCQKELNRQIQAPNLDVMLQHGLIKERFASLATDSIRA ELLGLVGYDAQLLEFIDLEHTPKNIMIRAYLTNRQATAETKARYLAFKQMLGADPFLERELSDRLVLEVEQDVK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45579; Mature: 45579
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYKALQERLADVLQSNHLVSATISQPRQKSSDLRRIKLKPVMLRNAYHIQFEYQYERVM CCHHHHHHHHHHHHHCCCEEEEHHCCCHHHCCCHHEEEECEEEECCEEEEEEEEEHHHHH NHKNLTPDEAVTEVNELLETFRQGQFQLKDSDLQFQLSKKFKVTLKEKQTAQKEVQLSHN CCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCEEEEEHHHHHHHHHHHHHCC REKQYVLPLDEPVPFLIRLGIQSADGKVKRQKYDKFKQINRFLEFIEDSLKHLPTDRTVR CCCEEEECCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ILDFGSGKSYLTFALYHFLHEMKGYDVHITGLDLKKEVIEECASIAKDLGYERLEFLVGD EEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHC INEYEGETAVDMVVTLHACDVATDMALARAVRWGAKVILSVPCCQKELNRQIQAPNLDVM HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCCCCCCHHHH LQHGLIKERFASLATDSIRAELLGLVGYDAQLLEFIDLEHTPKNIMIRAYLTNRQATAET HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEECCCCHHHHH KARYLAFKQMLGADPFLERELSDRLVLEVEQDVK HHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCC >Mature Secondary Structure MEYKALQERLADVLQSNHLVSATISQPRQKSSDLRRIKLKPVMLRNAYHIQFEYQYERVM CCHHHHHHHHHHHHHCCCEEEEHHCCCHHHCCCHHEEEECEEEECCEEEEEEEEEHHHHH NHKNLTPDEAVTEVNELLETFRQGQFQLKDSDLQFQLSKKFKVTLKEKQTAQKEVQLSHN CCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCEEEEEHHHHHHHHHHHHHCC REKQYVLPLDEPVPFLIRLGIQSADGKVKRQKYDKFKQINRFLEFIEDSLKHLPTDRTVR CCCEEEECCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ILDFGSGKSYLTFALYHFLHEMKGYDVHITGLDLKKEVIEECASIAKDLGYERLEFLVGD EEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHC INEYEGETAVDMVVTLHACDVATDMALARAVRWGAKVILSVPCCQKELNRQIQAPNLDVM HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCCCCCCHHHH LQHGLIKERFASLATDSIRAELLGLVGYDAQLLEFIDLEHTPKNIMIRAYLTNRQATAET HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEEECCCCHHHHH KARYLAFKQMLGADPFLERELSDRLVLEVEQDVK HHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA