Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is ypgQ [H]

Identifier: 229916225

GI number: 229916225

Start: 450668

End: 451243

Strand: Reverse

Name: ypgQ [H]

Synonym: EAT1b_0494

Alternate gene names: 229916225

Gene position: 451243-450668 (Counterclockwise)

Preceding gene: 229916226

Following gene: 229916222

Centisome position: 15.04

GC content: 47.57

Gene sequence:

>576_bases
GTGGACGTGATACAAGCGACGAGAAAGTTCGTCGAAACAATTCATGCAAATGATCAGACGGGTCATGATATTGCCCACAT
CGAGCGGGTCGTTCGACTCGTAGAGCGCTTGATGGAAAATGAACCGGTCGATCGAACGGGACTTCTGTTAGCCGCTTATT
TACATGACGTCGAAGACCATAAGCTCGGTCGTCCAAAAGAGCTCGTCAAACAACATTTGGCTTCTCTCGACATCACAGAG
GAGCGAGCGAGTTTCGTGGAAGCGTTGATTGATGAGGTTTCTTTTTCAAAAGGCATGACACCAACGACTCGCGAAAGTGA
AATCCTACAAGATGCCGACCGCCTTGATGCGATTGGGGCCATCGGTATTGCGCGAACGTTCCAATTCGCGGGTTCTCGCG
GTACACCTCTTGATTTGTCAGAGGATAGTGCGATTCAACATTTTCAAGATAAGTTATTGAAGTTAGCGTCGATGATGCAT
ACGAAAGAAGCGAAACGCTTGGCACATTCACGTCATGTCTTCATGGAAAGGTTCTACAACCAGTTTCATGAAGAATGGGA
CGGGATGGATACATGA

Upstream 100 bases:

>100_bases
ATACGTTCCCGCCGATTAAACAAGATGCTCAGGCATTTTGTGACCAATTGCACCGTCGAGGTCTCTTGATTGAACCGAAT
ACGACGATCGAGATTTGAGT

Downstream 100 bases:

>100_bases
AAGGGACGACCGATTGATTTCGGTCGTCCCTTTTTCTAGGTTAGAATGGATGTTTGTTGAGCCAATGTCCACCGTCTAAT
GAAATACAATCTCCGTTCAA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MDVIQATRKFVETIHANDQTGHDIAHIERVVRLVERLMENEPVDRTGLLLAAYLHDVEDHKLGRPKELVKQHLASLDITE
ERASFVEALIDEVSFSKGMTPTTRESEILQDADRLDAIGAIGIARTFQFAGSRGTPLDLSEDSAIQHFQDKLLKLASMMH
TKEAKRLAHSRHVFMERFYNQFHEEWDGMDT

Sequences:

>Translated_191_residues
MDVIQATRKFVETIHANDQTGHDIAHIERVVRLVERLMENEPVDRTGLLLAAYLHDVEDHKLGRPKELVKQHLASLDITE
ERASFVEALIDEVSFSKGMTPTTRESEILQDADRLDAIGAIGIARTFQFAGSRGTPLDLSEDSAIQHFQDKLLKLASMMH
TKEAKRLAHSRHVFMERFYNQFHEEWDGMDT
>Mature_191_residues
MDVIQATRKFVETIHANDQTGHDIAHIERVVRLVERLMENEPVDRTGLLLAAYLHDVEDHKLGRPKELVKQHLASLDITE
ERASFVEALIDEVSFSKGMTPTTRESEILQDADRLDAIGAIGIARTFQFAGSRGTPLDLSEDSAIQHFQDKLLKLASMMH
TKEAKRLAHSRHVFMERFYNQFHEEWDGMDT

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=209, Percent_Identity=33.0143540669856, Blast_Score=97, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21835; Mature: 21835

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVIQATRKFVETIHANDQTGHDIAHIERVVRLVERLMENEPVDRTGLLLAAYLHDVEDH
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
KLGRPKELVKQHLASLDITEERASFVEALIDEVSFSKGMTPTTRESEILQDADRLDAIGA
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
IGIARTFQFAGSRGTPLDLSEDSAIQHFQDKLLKLASMMHTKEAKRLAHSRHVFMERFYN
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFHEEWDGMDT
HHHHHHCCCCC
>Mature Secondary Structure
MDVIQATRKFVETIHANDQTGHDIAHIERVVRLVERLMENEPVDRTGLLLAAYLHDVEDH
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
KLGRPKELVKQHLASLDITEERASFVEALIDEVSFSKGMTPTTRESEILQDADRLDAIGA
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
IGIARTFQFAGSRGTPLDLSEDSAIQHFQDKLLKLASMMHTKEAKRLAHSRHVFMERFYN
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFHEEWDGMDT
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]